RNA–Protein interactions for RNA: ENST00000487620.1

ZNF3-215, Transcript of zinc finger protein 3, human

TSL 2

Gene ZNF3, Length 2,660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-215	ENST00000487620	RBMXL3	Q8N7X1	1067 aa	Known RBP	7.92	□□□□□ -1.14
ZNF3-215	ENST00000487620	FAM169B	Q8N8A8	192 aa		7.92	□□□□□ -1.14
ZNF3-215	ENST00000487620	OR1L4	Q8NGR5	311 aa		7.92	□□□□□ -1.14
ZNF3-215	ENST00000487620	OSR1	Q8TAX0	266 aa	Predicted RBP	7.92	□□□□□ -1.14
ZNF3-215	ENST00000487620	MBD6	Q96DN6	1003 aa		7.92	□□□□□ -1.14
ZNF3-215	ENST00000487620	FNDC4	Q9H6D8	234 aa	Predicted RBP	7.92	□□□□□ -1.14
ZNF3-215	ENST00000487620	TNFRSF19	Q9NS68	423 aa		7.92	□□□□□ -1.14
ZNF3-215	ENST00000487620	KALRN	O60229	2985 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	hADV38S2	A0JD32	116 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	GATA4	P43694	442 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	WT1-AS	Q06250	92 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	TIMM23B	Q5SRD1	257 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	ZNF474	Q6S9Z5	364 aa	Predicted RBP	7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	ZNF788	Q6ZQV5	615 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	FAM231D	Q6ZW35	169 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	LINC00305	Q7Z4B0	112 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	RPRML	Q8N4K4	120 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	FLYWCH2	Q96CP2	140 aa	Known RBP	7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	ALKBH7	Q9BT30	221 aa	Predicted RBP	7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	ZNF430	Q9H8G1	570 aa	Predicted RBP	7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	IGLV3-9	A0A075B6K5	115 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620		H0YJW9	148 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	TM4SF5	O14894	197 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	SLC25A5	P05141	298 aa	Known RBP	7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	HIST1H1E	P10412	219 aa	Known RBP	7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	CCL3L1	P16619	93 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	ORM2	P19652	201 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	CCL8	P80075	99 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	PLA2G2C	Q5R387	149 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	UNQ5815/PRO19632	Q6UWF5	114 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	ZNF841	Q6ZN19	808 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	ZNF833P	Q6ZTB9	187 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	TCF24	Q7RTU0	167 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	CLEC5A	Q9NY25	188 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	MGA	Q8IWI9	3026 aa		7.91	□□□□□ -1.14
ZNF3-215	ENST00000487620	TCRBV4S1A1T	A0A5B7	111 aa		7.9	□□□□□ -1.14
ZNF3-215	ENST00000487620	VWC2L	B2RUY7	222 aa		7.9	□□□□□ -1.14
ZNF3-215	ENST00000487620	CD24	P25063	80 aa		7.9	□□□□□ -1.14
ZNF3-215	ENST00000487620	PTTG1IP	P53801	180 aa		7.9	□□□□□ -1.14
ZNF3-215	ENST00000487620	DIAPH2-AS1	Q14236	149 aa		7.9	□□□□□ -1.14
ZNF3-215	ENST00000487620	PDPN	Q86YL7	162 aa		7.9	□□□□□ -1.14
ZNF3-215	ENST00000487620	KIR3DL3	Q8N743	410 aa		7.9	□□□□□ -1.14
ZNF3-215	ENST00000487620	FXYD5	Q96DB9	178 aa		7.9	□□□□□ -1.14
ZNF3-215	ENST00000487620	MRPL36	Q9P0J6	103 aa	Known RBP	7.9	□□□□□ -1.14
ZNF3-215	ENST00000487620	TRAV9-2	A0A087WT02	112 aa		7.9	□□□□□ -1.15
ZNF3-215	ENST00000487620	SH2D7	A6NKC9	451 aa	Predicted RBP	7.9	□□□□□ -1.15
ZNF3-215	ENST00000487620		M0QZ24	198 aa		7.9	□□□□□ -1.15
ZNF3-215	ENST00000487620	MOS	P00540	346 aa		7.9	□□□□□ -1.15
ZNF3-215	ENST00000487620	IGLL1	P15814	213 aa		7.9	□□□□□ -1.15
ZNF3-215	ENST00000487620	TNFSF4	P23510	183 aa		7.9	□□□□□ -1.15
ZNF3-215	ENST00000487620	FOXA3	P55318	350 aa	Predicted RBP	7.9	□□□□□ -1.15
ZNF3-215	ENST00000487620	OR1B1	Q8NGR6	318 aa		7.9	□□□□□ -1.15
ZNF3-215	ENST00000487620	OR10X1	Q8NGY0	326 aa		7.9	□□□□□ -1.15
ZNF3-215	ENST00000487620	OR8B2	Q96RD0	313 aa		7.9	□□□□□ -1.15
ZNF3-215	ENST00000487620	GAL3ST2	Q9H3Q3	398 aa		7.9	□□□□□ -1.15
ZNF3-215	ENST00000487620	LINC00312	Q9Y6C7	94 aa		7.9	□□□□□ -1.15
ZNF3-215	ENST00000487620	ABCA1	O95477	2261 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	IGKV1D-37	A0A075B6S9	117 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	PGP	A6NDG6	321 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	CCL25	O15444	150 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	KLF5	Q13887	457 aa	Predicted RBP	7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	ZCCHC24	Q8N2G6	241 aa	Known RBP	7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	OR8B3	Q8NGG8	313 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	CHRDL1	Q9BU40	450 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	LINC00574	Q9H8X3	128 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	ADGRG4	Q8IZF6	3080 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	DMXL1	Q9Y485	3027 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	MBD3L4	A6NDZ8	208 aa	Predicted RBP	7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	MBD3L3	A6NE82	208 aa	Predicted RBP	7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	MBD3L5	A6NJ08	208 aa	Predicted RBP	7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	C2orf70	A6NJV1	201 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620		H3BTX0	84 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	APELA	P0DMC3	54 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	SUB1	P53999	127 aa	Known RBP eCLIP	7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	DEFB109B	Q30KR1	87 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	C22orf34	Q6ZV56	151 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	SPATA12	Q7Z6I5	190 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	OR4C13	Q8NGP0	309 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	H1FX	Q92522	213 aa	Known RBP	7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	ST6GALNAC6	Q969X2	333 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	TP73-AS1	Q9UF72	201 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	EPDR1	Q9UM22	224 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	SSUH2	Q9Y2M2	353 aa		7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	MRPS16	Q9Y3D3	137 aa	Known RBP	7.89	□□□□□ -1.15
ZNF3-215	ENST00000487620	IGHV2-26	A0A0B4J1V2	119 aa		7.88	□□□□□ -1.15
ZNF3-215	ENST00000487620	NKX6-3	A6NJ46	265 aa		7.88	□□□□□ -1.15
ZNF3-215	ENST00000487620	CGB1	A6NKQ9	187 aa		7.88	□□□□□ -1.15
ZNF3-215	ENST00000487620	IGFL2	Q6UWQ7	119 aa		7.88	□□□□□ -1.15
ZNF3-215	ENST00000487620	OR5AN1	Q8NGI8	311 aa		7.88	□□□□□ -1.15
ZNF3-215	ENST00000487620	PKDREJ	Q9NTG1	2253 aa		7.88	□□□□□ -1.15
ZNF3-215	ENST00000487620	CNOT1	A5YKK6	2376 aa	Known RBP	7.88	□□□□□ -1.15
ZNF3-215	ENST00000487620	IGHV3-21	A0A0B4J1V1	117 aa		7.88	□□□□□ -1.15
ZNF3-215	ENST00000487620	SLC25A17	O43808	307 aa		7.88	□□□□□ -1.15
ZNF3-215	ENST00000487620	OR2J3	O76001	311 aa		7.88	□□□□□ -1.15
ZNF3-215	ENST00000487620	FSTL3	O95633	263 aa		7.88	□□□□□ -1.15
ZNF3-215	ENST00000487620	HBB	P68871	147 aa		7.88	□□□□□ -1.15
ZNF3-215	ENST00000487620	FAM27E3	Q08E93	113 aa		7.88	□□□□□ -1.15
ZNF3-215	ENST00000487620	TMEM30B	Q3MIR4	351 aa		7.88	□□□□□ -1.15
ZNF3-215	ENST00000487620	TMEM177	Q53S58	311 aa		7.88	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms