RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 DEFB1P60022 68 aa11.58□□□□□ -0.56
SRRT-212ENST00000487311 USF2Q15853 346 aaPredicted RBP11.58□□□□□ -0.56
SRRT-212ENST00000487311 TRIM16LQ309B1 348 aa11.58□□□□□ -0.56
SRRT-212ENST00000487311 CENPSQ8N2Z9 138 aa11.58□□□□□ -0.56
SRRT-212ENST00000487311 OR52I2Q8NH67 350 aa11.58□□□□□ -0.56
SRRT-212ENST00000487311 Q8WTZ3 238 aa11.58□□□□□ -0.56
SRRT-212ENST00000487311 TMEM170AQ8WVE7 144 aa11.58□□□□□ -0.56
SRRT-212ENST00000487311 KRTAP4-5Q9BYR2 181 aa11.58□□□□□ -0.56
SRRT-212ENST00000487311 ENY2Q9NPA8 101 aa11.58□□□□□ -0.56
SRRT-212ENST00000487311 PLA2G2EQ9NZK7 142 aa11.58□□□□□ -0.56
SRRT-212ENST00000487311 RND2P52198 227 aa11.57□□□□□ -0.56
SRRT-212ENST00000487311 SPCS3P61009 180 aa11.57□□□□□ -0.56
SRRT-212ENST00000487311 VBP1P61758 197 aa11.57□□□□□ -0.56
SRRT-212ENST00000487311 AARDQ4LEZ3 155 aa11.57□□□□□ -0.56
SRRT-212ENST00000487311 GDF5OSQ5U4N7 250 aa11.57□□□□□ -0.56
SRRT-212ENST00000487311 GSG1LQ6UXU4 331 aa11.57□□□□□ -0.56
SRRT-212ENST00000487311 OR1S2Q8NGQ3 325 aa11.57□□□□□ -0.56
SRRT-212ENST00000487311 LHFPL5Q8TAF8 219 aa11.57□□□□□ -0.56
SRRT-212ENST00000487311 RRNAD1Q96FB5 475 aaKnown RBP11.57□□□□□ -0.56
SRRT-212ENST00000487311 NARS2Q96I59 477 aaKnown RBP11.57□□□□□ -0.56
SRRT-212ENST00000487311 NDUFAF3Q9BU61 184 aa11.57□□□□□ -0.56
SRRT-212ENST00000487311 ABCA13Q86UQ4 5058 aa11.57□□□□□ -0.56
SRRT-212ENST00000487311 BUB3O43684 328 aa11.56□□□□□ -0.56
SRRT-212ENST00000487311 OR10J1P30954 320 aa11.56□□□□□ -0.56
SRRT-212ENST00000487311 AP2S1P53680 142 aaPredicted RBP11.56□□□□□ -0.56
SRRT-212ENST00000487311 FXYD7P58549 80 aa11.56□□□□□ -0.56
SRRT-212ENST00000487311 YPEL3P61236 119 aaPredicted RBP11.56□□□□□ -0.56
SRRT-212ENST00000487311 RNASE10Q5GAN6 216 aaKnown RBP11.56□□□□□ -0.56
SRRT-212ENST00000487311 OR13C8Q8NGS7 320 aa11.56□□□□□ -0.56
SRRT-212ENST00000487311 TERB2Q8NHR7 220 aa11.56□□□□□ -0.56
SRRT-212ENST00000487311 GLYATL2Q8WU03 294 aa11.56□□□□□ -0.56
SRRT-212ENST00000487311 COPZ2Q9P299 210 aa11.56□□□□□ -0.56
SRRT-212ENST00000487311 HSPG2P98160 4391 aa11.55□□□□□ -0.56
SRRT-212ENST00000487311 ATG12O94817 140 aa11.55□□□□□ -0.56
SRRT-212ENST00000487311 CDS2O95674 445 aa11.55□□□□□ -0.56
SRRT-212ENST00000487311 IL4P05112 153 aa11.55□□□□□ -0.56
SRRT-212ENST00000487311 HTR2BP41595 481 aa11.55□□□□□ -0.56
SRRT-212ENST00000487311 EIF2B2P49770 351 aaKnown RBP11.55□□□□□ -0.56
SRRT-212ENST00000487311 EMP1P54849 157 aa11.55□□□□□ -0.56
SRRT-212ENST00000487311 LGALS9BQ3B8N2 356 aa11.55□□□□□ -0.56
SRRT-212ENST00000487311 C2orf83Q53S99 150 aa11.55□□□□□ -0.56
SRRT-212ENST00000487311 ZNF705AQ6ZN79 300 aaPredicted RBP11.55□□□□□ -0.56
SRRT-212ENST00000487311 ARRDC1Q8N5I2 433 aa11.55□□□□□ -0.56
SRRT-212ENST00000487311 OR52E5Q8NH55 327 aa11.55□□□□□ -0.56
SRRT-212ENST00000487311 MARCH1Q8TCQ1 289 aa11.55□□□□□ -0.56
SRRT-212ENST00000487311 NPIPB3Q92617 1050 aa11.55□□□□□ -0.56
SRRT-212ENST00000487311 GPR146Q96CH1 333 aa11.55□□□□□ -0.56
SRRT-212ENST00000487311 ABHD1Q96SE0 405 aa11.55□□□□□ -0.56
SRRT-212ENST00000487311 RTBDNQ9BSG5 229 aaPredicted RBP11.55□□□□□ -0.56
SRRT-212ENST00000487311 FUNDC2Q9BWH2 189 aa11.55□□□□□ -0.56
SRRT-212ENST00000487311 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.55□□□□□ -0.56
SRRT-212ENST00000487311 MTFP1Q9UDX5 166 aa11.55□□□□□ -0.56
SRRT-212ENST00000487311 IGLV2-18A0A075B6J9 118 aa11.54□□□□□ -0.56
SRRT-212ENST00000487311 RPS10-NUDT3A0A1W2PQS6 291 aa11.54□□□□□ -0.56
SRRT-212ENST00000487311 ZNF705FA8MVS1 300 aaPredicted RBP11.54□□□□□ -0.56
SRRT-212ENST00000487311 IGKV3-20P01619 116 aa11.54□□□□□ -0.56
SRRT-212ENST00000487311 OR5AC1P0C628 307 aa11.54□□□□□ -0.56
SRRT-212ENST00000487311 ZNF705DP0CH99 300 aaPredicted RBP11.54□□□□□ -0.56
SRRT-212ENST00000487311 ZNF705BP0CI00 300 aaPredicted RBP11.54□□□□□ -0.56
SRRT-212ENST00000487311 NPY1RP25929 384 aa11.54□□□□□ -0.56
SRRT-212ENST00000487311 Q6ZR54 194 aa11.54□□□□□ -0.56
SRRT-212ENST00000487311 SELENOHQ8IZQ5 122 aaKnown RBP11.54□□□□□ -0.56
SRRT-212ENST00000487311 ZFAND1Q8TCF1 268 aa11.54□□□□□ -0.56
SRRT-212ENST00000487311 C1QTNF4Q9BXJ3 329 aa11.54□□□□□ -0.56
SRRT-212ENST00000487311 NRN1Q9NPD7 142 aa11.54□□□□□ -0.56
SRRT-212ENST00000487311 HEYLQ9NQ87 328 aaPredicted RBP11.54□□□□□ -0.56
SRRT-212ENST00000487311 FAM25AB3EWG3 89 aa11.53□□□□□ -0.56
SRRT-212ENST00000487311 FAM25CB3EWG5 89 aa11.53□□□□□ -0.56
SRRT-212ENST00000487311 FAM25GB3EWG6 89 aa11.53□□□□□ -0.56
SRRT-212ENST00000487311 SCGB2A1O75556 95 aa11.53□□□□□ -0.56
SRRT-212ENST00000487311 CD74P04233 296 aa11.53□□□□□ -0.56
SRRT-212ENST00000487311 SLC25A4P12235 298 aa11.53□□□□□ -0.56
SRRT-212ENST00000487311 HLA-DRB4P13762 266 aa11.53□□□□□ -0.56
SRRT-212ENST00000487311 NUTF2P61970 127 aaKnown RBP11.53□□□□□ -0.56
SRRT-212ENST00000487311 SNRPD3P62318 126 aaKnown RBP11.53□□□□□ -0.56
SRRT-212ENST00000487311 MEF2DQ14814 521 aa11.53□□□□□ -0.56
SRRT-212ENST00000487311 SCGB2B2Q4G0G5 96 aa11.53□□□□□ -0.56
SRRT-212ENST00000487311 SIGLEC15Q6ZMC9 328 aa11.53□□□□□ -0.56
SRRT-212ENST00000487311 RNASE11Q8TAA1 199 aaKnown RBP11.53□□□□□ -0.56
SRRT-212ENST00000487311 RNASEH2CQ8TDP1 164 aaKnown RBP11.53□□□□□ -0.56
SRRT-212ENST00000487311 NEU1Q99519 415 aa11.53□□□□□ -0.56
SRRT-212ENST00000487311 WDR12Q9GZL7 423 aaKnown RBP11.53□□□□□ -0.56
SRRT-212ENST00000487311 TMEM222Q9H0R3 208 aa11.53□□□□□ -0.56
SRRT-212ENST00000487311 SEPSECSQ9HD40 501 aaKnown RBP11.53□□□□□ -0.56
SRRT-212ENST00000487311 CACNG5Q9UF02 275 aa11.53□□□□□ -0.56
SRRT-212ENST00000487311 HLA-DRB4X5D2U9 266 aa11.53□□□□□ -0.56
SRRT-212ENST00000487311 IGHV3OR16-12A0A075B7B8 117 aa11.52□□□□□ -0.57
SRRT-212ENST00000487311 A0A087WXM4 84 aa11.52□□□□□ -0.57
SRRT-212ENST00000487311 TEX13DA0A0J9YY54 714 aaPredicted RBP11.52□□□□□ -0.57
SRRT-212ENST00000487311 TOMM40O96008 361 aa11.52□□□□□ -0.57
SRRT-212ENST00000487311 SPART-AS1P0CW21 52 aa11.52□□□□□ -0.57
SRRT-212ENST00000487311 RD3LP0DJH9 198 aa11.52□□□□□ -0.57
SRRT-212ENST00000487311 PSG1P11464 419 aa11.52□□□□□ -0.57
SRRT-212ENST00000487311 RORCP51449 518 aa11.52□□□□□ -0.57
SRRT-212ENST00000487311 FAAP20Q6NZ36 180 aa11.52□□□□□ -0.57
SRRT-212ENST00000487311 CCDC71LQ8N9Z2 235 aa11.52□□□□□ -0.57
SRRT-212ENST00000487311 TMEM229BQ8NBD8 167 aa11.52□□□□□ -0.57
SRRT-212ENST00000487311 OR51G1Q8NGK1 321 aa11.52□□□□□ -0.57
SRRT-212ENST00000487311 ACY3Q96HD9 319 aa11.52□□□□□ -0.57
SRRT-212ENST00000487311 CEBPZOSA8MTT3 80 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms