RNA–Protein interactions for RNA: ENST00000487003.5

RAB3GAP1-204, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 3,506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-204ENST00000487003 UBA52P62987 128 aaKnown RBP4.24□□□□□ -1.73
RAB3GAP1-204ENST00000487003 NMSQ5H8A3 153 aa4.24□□□□□ -1.73
RAB3GAP1-204ENST00000487003 PXDC1Q5TGL8 231 aa4.24□□□□□ -1.73
RAB3GAP1-204ENST00000487003 FAM71F2Q6NXP2 309 aa4.24□□□□□ -1.73
RAB3GAP1-204ENST00000487003 WFDC12Q8WWY7 111 aa4.24□□□□□ -1.73
RAB3GAP1-204ENST00000487003 ST8SIA2Q92186 375 aa4.24□□□□□ -1.73
RAB3GAP1-204ENST00000487003 ZNF48Q96MX3 618 aaPredicted RBP4.24□□□□□ -1.73
RAB3GAP1-204ENST00000487003 RNF5Q99942 180 aa4.24□□□□□ -1.73
RAB3GAP1-204ENST00000487003 TPPP3Q9BW30 176 aa4.24□□□□□ -1.73
RAB3GAP1-204ENST00000487003 LYRM2Q9NU23 88 aaPredicted RBP4.24□□□□□ -1.73
RAB3GAP1-204ENST00000487003 ANAPC10Q9UM13 185 aa4.24□□□□□ -1.73
RAB3GAP1-204ENST00000487003 RFNGQ9Y644 331 aa4.24□□□□□ -1.73
RAB3GAP1-204ENST00000487003 ODF3BA8MYP8 253 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 BMPR1BO00238 502 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 SPP1P10451 314 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 MGST1P10620 155 aaKnown RBP4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 HIST1H1BP16401 226 aaKnown RBP4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 MAS1LP35410 378 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 CSN1S1P47710 185 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 CDC34P49427 236 aaPredicted RBP4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 PPT1P50897 306 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 PAFAH1B2P68402 229 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 PRR27Q6MZM9 219 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 C5orf56Q8N8D9 126 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 ST6GALNAC6Q969X2 333 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 SMIM8Q96KF7 97 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 HIGD1AQ9Y241 93 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 TENM4Q6N022 2769 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 I3L521 148 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 TAAR5O14804 337 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 FGF16O43320 207 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 ID3Q02535 119 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 ZNF90Q03938 601 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 ATP6V1FQ16864 119 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 TOR2AQ5JU69 321 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 Q6YL49 198 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 HAPLN4Q86UW8 402 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 C16orf92Q96LL3 132 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 SH3BGRL3Q9H299 93 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 GAR1Q9NY12 217 aaKnown RBP4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 HSPB7Q9UBY9 170 aa4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 F11RQ9Y624 299 aaKnown RBP4.23□□□□□ -1.73
RAB3GAP1-204ENST00000487003 CYSRT1A8MQ03 144 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 CRLF1O75462 422 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 IGLV2-14P01704 120 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 CXCL2P19875 107 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 BMI1P35226 326 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 RAB9AP51151 201 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 RPL15P61313 204 aaKnown RBP4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 CD69Q07108 199 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 FOXL1Q12952 345 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 LGALSLQ3ZCW2 172 aaPredicted RBP4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 Q6ZSV7 163 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 NECAP1Q8NC96 275 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 OR1L4Q8NGR5 311 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 SGMS2Q8NHU3 365 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 RXFP4Q8TDU9 374 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 RPUSD4Q96CM3 377 aaKnown RBP4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 CITED2Q99967 270 aaPredicted RBP4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 MAP1LC3B2A6NCE7 125 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 A6NDX4 124 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 HLA-DRB1P01911 266 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 SLC25A5P05141 298 aaKnown RBP4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 S100A9P06702 114 aaKnown RBP4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 BLOC1S1P78537 153 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 ANKRD39Q53RE8 183 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 GCSAMLQ5JQS6 135 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 C16orf54Q6UWD8 224 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 STPG3Q8N7X2 389 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 OR4D5Q8NGN0 318 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 OR1P1Q8NH06 330 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 RNF141Q8WVD5 230 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 ELOVL1Q9BW60 279 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 MAP1LC3BQ9GZQ8 125 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 SLA2Q9H6Q3 261 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 AAMDCQ9H7C9 122 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 TNFSF18Q9UNG2 199 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 ZNF257Q9Y2Q1 563 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 A0A087X0M5 115 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 A0A1B0GX30 115 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 RNASE2P10153 161 aaKnown RBP4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 CD28P10747 220 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 FHITP49789 147 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 UBE2G1P62253 170 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 FAM209BQ5JX69 171 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 LAMTOR1Q6IAA8 161 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 TCTE3Q8IZS6 198 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 TMEM158Q8WZ71 300 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 CFHR4Q92496 578 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 TUBA4BQ9H853 241 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 NDUFA4L2Q9NRX3 87 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 PEF1Q9UBV8 284 aaKnown RBP4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 NAGKQ9UJ70 344 aa4.22□□□□□ -1.73
RAB3GAP1-204ENST00000487003 TRAV14DV4A0A0A6YYC5 116 aa4.21□□□□□ -1.73
RAB3GAP1-204ENST00000487003 FSTL3O95633 263 aa4.21□□□□□ -1.73
RAB3GAP1-204ENST00000487003 TMEM50AO95807 157 aa4.21□□□□□ -1.73
RAB3GAP1-204ENST00000487003 PSG1P11464 419 aa4.21□□□□□ -1.73
RAB3GAP1-204ENST00000487003 AKR1D1P51857 326 aa4.21□□□□□ -1.73
RAB3GAP1-204ENST00000487003 SLURP1P55000 103 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms