RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 CD74P04233 296 aa14.35□□□□□ -0.11
PHF1-208ENST00000486845 SPART-AS1P0CW21 52 aa14.35□□□□□ -0.11
PHF1-208ENST00000486845 PI3P19957 117 aa14.35□□□□□ -0.11
PHF1-208ENST00000486845 TRIM16LQ309B1 348 aa14.35□□□□□ -0.11
PHF1-208ENST00000486845 RRNAD1Q96FB5 475 aaKnown RBP14.35□□□□□ -0.11
PHF1-208ENST00000486845 FAM210BQ96KR6 192 aa14.35□□□□□ -0.11
PHF1-208ENST00000486845 NEU1Q99519 415 aa14.35□□□□□ -0.11
PHF1-208ENST00000486845 C3orf85A0A1B0GTC6 90 aa14.34□□□□□ -0.11
PHF1-208ENST00000486845 APOA1P02647 267 aa14.34□□□□□ -0.11
PHF1-208ENST00000486845 IGLC1P0CG04 106 aa14.34□□□□□ -0.11
PHF1-208ENST00000486845 HTR2BP41595 481 aa14.34□□□□□ -0.11
PHF1-208ENST00000486845 YPEL3P61236 119 aaPredicted RBP14.34□□□□□ -0.11
PHF1-208ENST00000486845 SOHLH1Q5JUK2 328 aa14.34□□□□□ -0.11
PHF1-208ENST00000486845 RNASE11Q8TAA1 199 aaKnown RBP14.34□□□□□ -0.11
PHF1-208ENST00000486845 NRN1Q9NPD7 142 aa14.34□□□□□ -0.11
PHF1-208ENST00000486845 SMIM9A6NGZ8 99 aa14.33□□□□□ -0.12
PHF1-208ENST00000486845 SLC25A4P12235 298 aa14.33□□□□□ -0.12
PHF1-208ENST00000486845 OR10J1P30954 320 aa14.33□□□□□ -0.12
PHF1-208ENST00000486845 RND2P52198 227 aa14.33□□□□□ -0.12
PHF1-208ENST00000486845 ZNF705AQ6ZN79 300 aaPredicted RBP14.33□□□□□ -0.12
PHF1-208ENST00000486845 Q6ZR54 194 aa14.33□□□□□ -0.12
PHF1-208ENST00000486845 IGLV2-18A0A075B6J9 118 aa14.32□□□□□ -0.12
PHF1-208ENST00000486845 TEX48A0A1B0GUV7 120 aa14.32□□□□□ -0.12
PHF1-208ENST00000486845 ZNF705FA8MVS1 300 aaPredicted RBP14.32□□□□□ -0.12
PHF1-208ENST00000486845 GSTZ1O43708 216 aaPredicted RBP14.32□□□□□ -0.12
PHF1-208ENST00000486845 ZNF705DP0CH99 300 aaPredicted RBP14.32□□□□□ -0.12
PHF1-208ENST00000486845 ZNF705BP0CI00 300 aaPredicted RBP14.32□□□□□ -0.12
PHF1-208ENST00000486845 HLA-DRB4P13762 266 aa14.32□□□□□ -0.12
PHF1-208ENST00000486845 SPCS3P61009 180 aa14.32□□□□□ -0.12
PHF1-208ENST00000486845 LSM3P62310 102 aaKnown RBP14.32□□□□□ -0.12
PHF1-208ENST00000486845 DHODHQ02127 395 aa14.32□□□□□ -0.12
PHF1-208ENST00000486845 RNASE10Q5GAN6 216 aaKnown RBP14.32□□□□□ -0.12
PHF1-208ENST00000486845 PRSS54Q6PEW0 395 aa14.32□□□□□ -0.12
PHF1-208ENST00000486845 LHFPL1Q86WI0 220 aa14.32□□□□□ -0.12
PHF1-208ENST00000486845 CCDC71LQ8N9Z2 235 aa14.32□□□□□ -0.12
PHF1-208ENST00000486845 COPZ2Q9P299 210 aa14.32□□□□□ -0.12
PHF1-208ENST00000486845 COMMD3Q9UBI1 195 aa14.32□□□□□ -0.12
PHF1-208ENST00000486845 HLA-DRB4X5D2U9 266 aa14.32□□□□□ -0.12
PHF1-208ENST00000486845 A0A0G2JRQ6 117 aa14.31□□□□□ -0.12
PHF1-208ENST00000486845 IL4P05112 153 aa14.31□□□□□ -0.12
PHF1-208ENST00000486845 UCP1P25874 307 aa14.31□□□□□ -0.12
PHF1-208ENST00000486845 EMP1P54849 157 aa14.31□□□□□ -0.12
PHF1-208ENST00000486845 USF2Q15853 346 aaPredicted RBP14.31□□□□□ -0.12
PHF1-208ENST00000486845 SIGLEC15Q6ZMC9 328 aa14.31□□□□□ -0.12
PHF1-208ENST00000486845 ARRDC1Q8N5I2 433 aa14.31□□□□□ -0.12
PHF1-208ENST00000486845 OR52E5Q8NH55 327 aa14.31□□□□□ -0.12
PHF1-208ENST00000486845 RNASEH2CQ8TDP1 164 aaKnown RBP14.31□□□□□ -0.12
PHF1-208ENST00000486845 HEYLQ9NQ87 328 aaPredicted RBP14.31□□□□□ -0.12
PHF1-208ENST00000486845 RFNGQ9Y644 331 aa14.31□□□□□ -0.12
PHF1-208ENST00000486845 B3GALNT1O75752 331 aa14.3□□□□□ -0.12
PHF1-208ENST00000486845 NKX2-1P43699 371 aaPredicted RBP14.3□□□□□ -0.12
PHF1-208ENST00000486845 SP6Q3SY56 376 aa14.3□□□□□ -0.12
PHF1-208ENST00000486845 RNF212Q495C1 297 aa14.3□□□□□ -0.12
PHF1-208ENST00000486845 AARDQ4LEZ3 155 aa14.3□□□□□ -0.12
PHF1-208ENST00000486845 C2orf83Q53S99 150 aa14.3□□□□□ -0.12
PHF1-208ENST00000486845 Q6ZRM9 215 aa14.3□□□□□ -0.12
PHF1-208ENST00000486845 ZNF575Q86XF7 245 aa14.3□□□□□ -0.12
PHF1-208ENST00000486845 FAM219AQ8IW50 185 aa14.3□□□□□ -0.12
PHF1-208ENST00000486845 ZFAND1Q8TCF1 268 aa14.3□□□□□ -0.12
PHF1-208ENST00000486845 BUB3O43684 328 aa14.29□□□□□ -0.12
PHF1-208ENST00000486845 YIPF6Q96EC8 236 aa14.29□□□□□ -0.12
PHF1-208ENST00000486845 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.29□□□□□ -0.12
PHF1-208ENST00000486845 IGHV3OR16-12A0A075B7B8 117 aa14.28□□□□□ -0.12
PHF1-208ENST00000486845 ELK1P19419 428 aa14.28□□□□□ -0.12
PHF1-208ENST00000486845 TBPP20226 339 aa14.28□□□□□ -0.12
PHF1-208ENST00000486845 ETFRF1Q6IPR1 90 aa14.28□□□□□ -0.12
PHF1-208ENST00000486845 SLC24A4Q8NFF2 622 aa14.28□□□□□ -0.12
PHF1-208ENST00000486845 NIPSNAP3BQ9BS92 247 aa14.28□□□□□ -0.12
PHF1-208ENST00000486845 DKK2Q9UBU2 259 aa14.28□□□□□ -0.12
PHF1-208ENST00000486845 TOMM40O96008 361 aa14.27□□□□□ -0.13
PHF1-208ENST00000486845 CD3DP04234 171 aa14.27□□□□□ -0.13
PHF1-208ENST00000486845 RD3LP0DJH9 198 aa14.27□□□□□ -0.13
PHF1-208ENST00000486845 NUP62P37198 522 aaPredicted RBP14.27□□□□□ -0.13
PHF1-208ENST00000486845 C1orf134Q5TEV5 83 aa14.27□□□□□ -0.13
PHF1-208ENST00000486845 KRTAP4-5Q9BYR2 181 aa14.27□□□□□ -0.13
PHF1-208ENST00000486845 HPGDSO60760 199 aa14.26□□□□□ -0.13
PHF1-208ENST00000486845 IGKV3-20P01619 116 aa14.26□□□□□ -0.13
PHF1-208ENST00000486845 OXA1LQ15070 435 aa14.26□□□□□ -0.13
PHF1-208ENST00000486845 RNASE12Q5GAN4 147 aaKnown RBP14.26□□□□□ -0.13
PHF1-208ENST00000486845 FAM222AQ5U5X8 452 aa14.26□□□□□ -0.13
PHF1-208ENST00000486845 OR13C8Q8NGS7 320 aa14.26□□□□□ -0.13
PHF1-208ENST00000486845 TERB2Q8NHR7 220 aa14.26□□□□□ -0.13
PHF1-208ENST00000486845 NPIPB3Q92617 1050 aa14.26□□□□□ -0.13
PHF1-208ENST00000486845 ACY3Q96HD9 319 aa14.26□□□□□ -0.13
PHF1-208ENST00000486845 CLUHP3Q96NS8 147 aa14.26□□□□□ -0.13
PHF1-208ENST00000486845 TMEM222Q9H0R3 208 aa14.26□□□□□ -0.13
PHF1-208ENST00000486845 VCX3AQ9NNX9 186 aa14.26□□□□□ -0.13
PHF1-208ENST00000486845 KLK11Q9UBX7 282 aa14.26□□□□□ -0.13
PHF1-208ENST00000486845 PFDN2Q9UHV9 154 aa14.26□□□□□ -0.13
PHF1-208ENST00000486845 HSPG2P98160 4391 aa14.26□□□□□ -0.13
PHF1-208ENST00000486845 CEBPZOSA8MTT3 80 aa14.25□□□□□ -0.13
PHF1-208ENST00000486845 HTN3P15516 51 aa14.25□□□□□ -0.13
PHF1-208ENST00000486845 FXYD7P58549 80 aa14.25□□□□□ -0.13
PHF1-208ENST00000486845 GDF5OSQ5U4N7 250 aa14.25□□□□□ -0.13
PHF1-208ENST00000486845 FOXI2Q6ZQN5 318 aa14.25□□□□□ -0.13
PHF1-208ENST00000486845 NOXA1Q86UR1 476 aa14.25□□□□□ -0.13
PHF1-208ENST00000486845 SAV1Q9H4B6 383 aaPredicted RBP14.25□□□□□ -0.13
PHF1-208ENST00000486845 CACNG5Q9UF02 275 aa14.25□□□□□ -0.13
PHF1-208ENST00000486845 CDS2O95674 445 aa14.24□□□□□ -0.13
PHF1-208ENST00000486845 ID1P41134 155 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms