RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 TMEM18Q96B42 140 aa14.43□□□□□ -0.1
PDLIM7-207ENST00000486828 INSIG2Q9Y5U4 225 aa14.43□□□□□ -0.1
PDLIM7-207ENST00000486828 CNTFRP26992 372 aa14.43□□□□□ -0.1
PDLIM7-207ENST00000486828 TNXAQ16473 311 aa14.43□□□□□ -0.1
PDLIM7-207ENST00000486828 IGF2BP2-AS1Q96M15 143 aa14.43□□□□□ -0.1
PDLIM7-207ENST00000486828 PAXXQ9BUH6 204 aa14.43□□□□□ -0.1
PDLIM7-207ENST00000486828 SIGLEC9Q9Y336 463 aa14.43□□□□□ -0.1
PDLIM7-207ENST00000486828 PPIAL4CA0A0B4J2A2 164 aa14.42□□□□□ -0.1
PDLIM7-207ENST00000486828 CCL21O00585 134 aa14.42□□□□□ -0.1
PDLIM7-207ENST00000486828 GCGP01275 180 aa14.42□□□□□ -0.1
PDLIM7-207ENST00000486828 PPIAL4GP0DN37 164 aa14.42□□□□□ -0.1
PDLIM7-207ENST00000486828 ADMP35318 185 aa14.42□□□□□ -0.1
PDLIM7-207ENST00000486828 GBGT1Q8N5D6 347 aa14.42□□□□□ -0.1
PDLIM7-207ENST00000486828 C8orf46Q8TAG6 207 aa14.42□□□□□ -0.1
PDLIM7-207ENST00000486828 BBC3Q96PG8 261 aaPredicted RBP14.42□□□□□ -0.1
PDLIM7-207ENST00000486828 OSTCQ9NRP0 149 aa14.42□□□□□ -0.1
PDLIM7-207ENST00000486828 IGLV2-8P01709 118 aa14.41□□□□□ -0.1
PDLIM7-207ENST00000486828 GZMBP10144 247 aa14.41□□□□□ -0.1
PDLIM7-207ENST00000486828 COMPP49747 757 aaPredicted RBP14.41□□□□□ -0.1
PDLIM7-207ENST00000486828 MFAP2P55001 183 aa14.41□□□□□ -0.1
PDLIM7-207ENST00000486828 PRB3Q04118 309 aaPredicted RBP14.41□□□□□ -0.1
PDLIM7-207ENST00000486828 HCP5Q6MZN7 132 aa14.41□□□□□ -0.1
PDLIM7-207ENST00000486828 ST6GALNAC3Q8NDV1 305 aa14.41□□□□□ -0.1
PDLIM7-207ENST00000486828 MISP3Q96FF7 219 aa14.41□□□□□ -0.1
PDLIM7-207ENST00000486828 POLEQ07864 2286 aa14.41□□□□□ -0.1
PDLIM7-207ENST00000486828 C22orf46C9J442 243 aa14.41□□□□□ -0.1
PDLIM7-207ENST00000486828 PYYP10082 97 aa14.41□□□□□ -0.1
PDLIM7-207ENST00000486828 TNFRSF19Q9NS68 423 aa14.41□□□□□ -0.1
PDLIM7-207ENST00000486828 AMMECR1Q9Y4X0 333 aaPredicted RBP14.41□□□□□ -0.1
PDLIM7-207ENST00000486828 CHD6Q8TD26 2715 aa14.4□□□□□ -0.1
PDLIM7-207ENST00000486828 ISLRO14498 428 aa14.4□□□□□ -0.1
PDLIM7-207ENST00000486828 COX7A1P24310 79 aa14.4□□□□□ -0.1
PDLIM7-207ENST00000486828 TAS2R60P59551 318 aa14.4□□□□□ -0.1
PDLIM7-207ENST00000486828 C9orf152Q5JTZ5 239 aa14.4□□□□□ -0.1
PDLIM7-207ENST00000486828 OR8B3Q8NGG8 313 aa14.4□□□□□ -0.1
PDLIM7-207ENST00000486828 OR1L6Q8NGR2 347 aa14.4□□□□□ -0.1
PDLIM7-207ENST00000486828 OR8B2Q96RD0 313 aa14.4□□□□□ -0.1
PDLIM7-207ENST00000486828 TRGV9Q99603 122 aa14.4□□□□□ -0.1
PDLIM7-207ENST00000486828 CBLN1P23435 193 aa14.39□□□□□ -0.11
PDLIM7-207ENST00000486828 PAX2Q02962 417 aa14.39□□□□□ -0.11
PDLIM7-207ENST00000486828 RUSC1-AS1Q66K80 236 aa14.39□□□□□ -0.11
PDLIM7-207ENST00000486828 LINC00305Q7Z4B0 112 aa14.39□□□□□ -0.11
PDLIM7-207ENST00000486828 C22orf15Q8WYQ4 148 aa14.39□□□□□ -0.11
PDLIM7-207ENST00000486828 RPEQ96AT9 228 aa14.39□□□□□ -0.11
PDLIM7-207ENST00000486828 RNASE7Q9H1E1 156 aaKnown RBP14.39□□□□□ -0.11
PDLIM7-207ENST00000486828 CDC42EP3Q9UKI2 254 aa14.39□□□□□ -0.11
PDLIM7-207ENST00000486828 CORTO00230 105 aa14.39□□□□□ -0.11
PDLIM7-207ENST00000486828 MOSP00540 346 aa14.39□□□□□ -0.11
PDLIM7-207ENST00000486828 PKIAP61925 76 aa14.39□□□□□ -0.11
PDLIM7-207ENST00000486828 ZNF329Q86UD4 541 aa14.39□□□□□ -0.11
PDLIM7-207ENST00000486828 PPP1R27Q86WC6 154 aa14.39□□□□□ -0.11
PDLIM7-207ENST00000486828 OR8I2Q8N0Y5 310 aa14.39□□□□□ -0.11
PDLIM7-207ENST00000486828 TMEM116Q8NCL8 245 aa14.39□□□□□ -0.11
PDLIM7-207ENST00000486828 FXYD5Q96DB9 178 aa14.39□□□□□ -0.11
PDLIM7-207ENST00000486828 MRPL18Q9H0U6 180 aaKnown RBP14.39□□□□□ -0.11
PDLIM7-207ENST00000486828 NAV3Q8IVL0 2385 aa14.38□□□□□ -0.11
PDLIM7-207ENST00000486828 LY6LH3BQJ8 138 aa14.38□□□□□ -0.11
PDLIM7-207ENST00000486828 LY6G5BQ8NDX9 201 aa14.38□□□□□ -0.11
PDLIM7-207ENST00000486828 PERPQ96FX8 193 aa14.38□□□□□ -0.11
PDLIM7-207ENST00000486828 TRBV9A0A0B4J1U6 114 aa14.37□□□□□ -0.11
PDLIM7-207ENST00000486828 TEX22C9J3V5 150 aa14.37□□□□□ -0.11
PDLIM7-207ENST00000486828 ADORA2A-AS1P86434 159 aa14.37□□□□□ -0.11
PDLIM7-207ENST00000486828 C19orf35Q6ZS72 473 aa14.37□□□□□ -0.11
PDLIM7-207ENST00000486828 TMEM256Q8N2U0 113 aa14.37□□□□□ -0.11
PDLIM7-207ENST00000486828 RNF5Q99942 180 aa14.37□□□□□ -0.11
PDLIM7-207ENST00000486828 F11RQ9Y624 299 aaKnown RBP14.37□□□□□ -0.11
PDLIM7-207ENST00000486828 A0A1B0GUS0 222 aa14.37□□□□□ -0.11
PDLIM7-207ENST00000486828 LIPFP07098 398 aa14.37□□□□□ -0.11
PDLIM7-207ENST00000486828 MGST1P10620 155 aaKnown RBP14.37□□□□□ -0.11
PDLIM7-207ENST00000486828 ORM2P19652 201 aa14.37□□□□□ -0.11
PDLIM7-207ENST00000486828 IER3P46695 156 aa14.37□□□□□ -0.11
PDLIM7-207ENST00000486828 CX3CL1P78423 397 aa14.37□□□□□ -0.11
PDLIM7-207ENST00000486828 RPL19P84098 196 aaKnown RBP14.37□□□□□ -0.11
PDLIM7-207ENST00000486828 FXYD3Q14802 87 aa14.37□□□□□ -0.11
PDLIM7-207ENST00000486828 CDSNQ15517 529 aa14.37□□□□□ -0.11
PDLIM7-207ENST00000486828 IBA57Q5T440 356 aaKnown RBP14.37□□□□□ -0.11
PDLIM7-207ENST00000486828 STXBP6Q8NFX7 210 aa14.37□□□□□ -0.11
PDLIM7-207ENST00000486828 RELNP78509 3460 aa14.36□□□□□ -0.11
PDLIM7-207ENST00000486828 TSTD3H0UI37 97 aa14.36□□□□□ -0.11
PDLIM7-207ENST00000486828 FCN1O00602 326 aa14.36□□□□□ -0.11
PDLIM7-207ENST00000486828 PEX7O00628 323 aa14.36□□□□□ -0.11
PDLIM7-207ENST00000486828 APELAP0DMC3 54 aa14.36□□□□□ -0.11
PDLIM7-207ENST00000486828 OR1B1Q8NGR6 318 aa14.36□□□□□ -0.11
PDLIM7-207ENST00000486828 GNB1LQ9BYB4 327 aa14.36□□□□□ -0.11
PDLIM7-207ENST00000486828 RAB1BQ9H0U4 201 aa14.36□□□□□ -0.11
PDLIM7-207ENST00000486828 FBXL15Q9H469 300 aa14.36□□□□□ -0.11
PDLIM7-207ENST00000486828 ONECUT1Q9UBC0 465 aa14.36□□□□□ -0.11
PDLIM7-207ENST00000486828 SNURFLB1AK76 121 aa14.35□□□□□ -0.11
PDLIM7-207ENST00000486828 MYCNOSP40205 109 aa14.35□□□□□ -0.11
PDLIM7-207ENST00000486828 LINC00479Q96M42 142 aa14.35□□□□□ -0.11
PDLIM7-207ENST00000486828 FAM208BQ5VWN6 2430 aa14.35□□□□□ -0.11
PDLIM7-207ENST00000486828 MALRD1Q5VYJ5 2156 aa14.35□□□□□ -0.11
PDLIM7-207ENST00000486828 GRIFINA4D1Z8 144 aa14.35□□□□□ -0.11
PDLIM7-207ENST00000486828 PRSS47A8MTI9 375 aa14.35□□□□□ -0.11
PDLIM7-207ENST00000486828 NUPR1O60356 82 aa14.35□□□□□ -0.11
PDLIM7-207ENST00000486828 FRMD6-AS1P0C7T7 363 aa14.35□□□□□ -0.11
PDLIM7-207ENST00000486828 SRSF12Q8WXF0 261 aaKnown RBP14.35□□□□□ -0.11
PDLIM7-207ENST00000486828 ADGRG4Q8IZF6 3080 aa14.34□□□□□ -0.11
PDLIM7-207ENST00000486828 SMIM27A0A1W2PRY6 76 aa14.34□□□□□ -0.11
PDLIM7-207ENST00000486828 PRB1P04280 392 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms