RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 SPSB3Q6PJ21 355 aa5.43□□□□□ -1.54
UBR4-214ENST00000486515 TEPPQ6URK8 271 aa5.43□□□□□ -1.54
UBR4-214ENST00000486515 Q6ZRG5 221 aa5.43□□□□□ -1.54
UBR4-214ENST00000486515 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.43□□□□□ -1.54
UBR4-214ENST00000486515 SCARB1Q8WTV0 552 aa5.43□□□□□ -1.54
UBR4-214ENST00000486515 Q8WTZ3 238 aa5.43□□□□□ -1.54
UBR4-214ENST00000486515 WFDC12Q8WWY7 111 aa5.43□□□□□ -1.54
UBR4-214ENST00000486515 NPIPB3Q92617 1050 aa5.43□□□□□ -1.54
UBR4-214ENST00000486515 BSCL2Q96G97 398 aaPredicted RBP5.43□□□□□ -1.54
UBR4-214ENST00000486515 NARS2Q96I59 477 aaKnown RBP5.43□□□□□ -1.54
UBR4-214ENST00000486515 UBE2E2Q96LR5 201 aa5.43□□□□□ -1.54
UBR4-214ENST00000486515 OR4C12Q96R67 309 aa5.43□□□□□ -1.54
UBR4-214ENST00000486515 ATP6V0BQ99437 205 aa5.43□□□□□ -1.54
UBR4-214ENST00000486515 ZNF471Q9BX82 626 aaPredicted RBP5.43□□□□□ -1.54
UBR4-214ENST00000486515 TRBV9A0A0B4J1U6 114 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 A0A1W2PRX2 142 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 ANKRD34BA5PLL1 514 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 OR2T8A6NH00 312 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 BCL2L11O43521 198 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 SOX15O60248 233 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 CLN5O75503 358 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 YIF1AO95070 293 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 NDUFB8O95169 186 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 TMEM50AO95807 157 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 IGHV3-11P01762 117 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 IGHV3-23P01764 117 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 RPLP1P05386 114 aaKnown RBP5.42□□□□□ -1.54
UBR4-214ENST00000486515 CLEC3BP05452 202 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 TPT1P13693 172 aaKnown RBP5.42□□□□□ -1.54
UBR4-214ENST00000486515 ZP3P21754 424 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 FGF7P21781 194 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 GPR183P32249 361 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 BMI1P35226 326 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 CDX1P47902 265 aaPredicted RBP5.42□□□□□ -1.54
UBR4-214ENST00000486515 SELENOTP62341 195 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 GAMTQ14353 236 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 RPEL1Q2QD12 228 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 FAM122CQ6P4D5 195 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 CLEC19AQ6UXS0 136 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 TMUB2Q71RG4 321 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 TMEM144Q7Z5S9 345 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 KCNRGQ8N5I3 272 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 C11orf44Q8N8P7 122 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 TMEM116Q8NCL8 245 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 KLHL30-AS1Q8NEE0 82 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 BPIFCQ8NFQ6 507 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 OR4X1Q8NH49 305 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 GNPNAT1Q96EK6 184 aaPredicted RBP5.42□□□□□ -1.54
UBR4-214ENST00000486515 FANCD2OSQ96PS1 177 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 OR5B12Q96R08 314 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 PEF1Q9UBV8 284 aaKnown RBP5.42□□□□□ -1.54
UBR4-214ENST00000486515 FBXL17Q9UF56 701 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 RNF24Q9Y225 148 aa5.42□□□□□ -1.54
UBR4-214ENST00000486515 I3L2K1 104 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 M0QZ24 198 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 TGOLN2O43493 480 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 GGCTO75223 188 aaKnown RBP5.41□□□□□ -1.54
UBR4-214ENST00000486515 IGHV3-48P01763 117 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 PF4P02776 101 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 LGALS1P09382 135 aaKnown RBP5.41□□□□□ -1.54
UBR4-214ENST00000486515 RD3LP0DJH9 198 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 CAMLGP49069 296 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 PROK1P58294 105 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 CFHR3Q02985 330 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 ZNF616Q08AN1 781 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 NSUN5P1Q3KNT7 163 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 AWAT1Q58HT5 328 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 C19orf54Q5BKX5 351 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 BTNL8Q6UX41 500 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 C19orf35Q6ZS72 473 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 LCNL1Q6ZST4 164 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 NDUFA11Q86Y39 141 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 ZNF491Q8N8L2 437 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 OR4F17Q8NGA8 305 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 C4orf3Q8WVX3 66 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 TAF15Q92804 592 aaKnown RBP eCLIP5.41□□□□□ -1.54
UBR4-214ENST00000486515 OR4F4Q96R69 305 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 GINS3Q9BRX5 216 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 KLK15Q9H2R5 256 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 S4R3C0 116 aa5.41□□□□□ -1.54
UBR4-214ENST00000486515 TENM3Q9P273 2699 aa5.4□□□□□ -1.54
UBR4-214ENST00000486515 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.4□□□□□ -1.54
UBR4-214ENST00000486515 ZNF320A2RRD8 509 aa5.4□□□□□ -1.54
UBR4-214ENST00000486515 RNF222A6NCQ9 220 aa5.4□□□□□ -1.54
UBR4-214ENST00000486515 MFSD2BA6NFX1 497 aa5.4□□□□□ -1.54
UBR4-214ENST00000486515 LINC01619G3V211 115 aa5.4□□□□□ -1.54
UBR4-214ENST00000486515 K7EIM0 57 aa5.4□□□□□ -1.54
UBR4-214ENST00000486515 BMPR1BO00238 502 aa5.4□□□□□ -1.54
UBR4-214ENST00000486515 AGPAT2O15120 278 aa5.4□□□□□ -1.54
UBR4-214ENST00000486515 TSPAN15O95858 294 aa5.4□□□□□ -1.54
UBR4-214ENST00000486515 MBP02144 154 aa5.4□□□□□ -1.54
UBR4-214ENST00000486515 HSPB1P04792 205 aaKnown RBP5.4□□□□□ -1.54
UBR4-214ENST00000486515 CD28P10747 220 aa5.4□□□□□ -1.54
UBR4-214ENST00000486515 FCGR2BP31994 310 aaPredicted RBP5.4□□□□□ -1.54
UBR4-214ENST00000486515 MFAP2P55001 183 aa5.4□□□□□ -1.54
UBR4-214ENST00000486515 DEFA5Q01523 94 aa5.4□□□□□ -1.54
UBR4-214ENST00000486515 OPCMLQ14982 345 aa5.4□□□□□ -1.54
UBR4-214ENST00000486515 MLANAQ16655 118 aa5.4□□□□□ -1.54
UBR4-214ENST00000486515 AKR1C8PQ5T2L2 129 aa5.4□□□□□ -1.54
UBR4-214ENST00000486515 PVRIGQ6DKI7 326 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms