RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 RUNX1Q01196 453 aa7.34□□□□□ -1.23
TMEM39A-208ENST00000486159 BSXQ3C1V8 233 aa7.34□□□□□ -1.23
TMEM39A-208ENST00000486159 C8orf86Q6ZUL3 223 aa7.34□□□□□ -1.23
TMEM39A-208ENST00000486159 C16orf82Q7Z2V1 217 aa7.34□□□□□ -1.23
TMEM39A-208ENST00000486159 SVBPQ8N300 66 aa7.34□□□□□ -1.23
TMEM39A-208ENST00000486159 C5orf56Q8N8D9 126 aa7.34□□□□□ -1.23
TMEM39A-208ENST00000486159 CACNG8Q8WXS5 425 aa7.34□□□□□ -1.23
TMEM39A-208ENST00000486159 NARS2Q96I59 477 aaKnown RBP7.34□□□□□ -1.23
TMEM39A-208ENST00000486159 NPVFQ9HCQ7 196 aa7.34□□□□□ -1.23
TMEM39A-208ENST00000486159 TREM1Q9NP99 234 aa7.34□□□□□ -1.23
TMEM39A-208ENST00000486159 NDUFA4L2Q9NRX3 87 aa7.34□□□□□ -1.23
TMEM39A-208ENST00000486159 COL7A1Q02388 2944 aa7.33□□□□□ -1.24
TMEM39A-208ENST00000486159 PSMB11A5LHX3 300 aa7.33□□□□□ -1.24
TMEM39A-208ENST00000486159 IGKV1D-33P01593 117 aa7.33□□□□□ -1.24
TMEM39A-208ENST00000486159 IGKV1-33P01594 117 aa7.33□□□□□ -1.24
TMEM39A-208ENST00000486159 GPX4P36969 197 aaPredicted RBP7.33□□□□□ -1.24
TMEM39A-208ENST00000486159 OPRK1P41145 380 aa7.33□□□□□ -1.24
TMEM39A-208ENST00000486159 HES1Q14469 280 aa7.33□□□□□ -1.24
TMEM39A-208ENST00000486159 GUK1Q16774 197 aa7.33□□□□□ -1.24
TMEM39A-208ENST00000486159 ACOT6Q3I5F7 207 aaPredicted RBP7.33□□□□□ -1.24
TMEM39A-208ENST00000486159 MOB3BQ86TA1 216 aa7.33□□□□□ -1.24
TMEM39A-208ENST00000486159 OR4X2Q8NGF9 303 aa7.33□□□□□ -1.24
TMEM39A-208ENST00000486159 RNASEH2CQ8TDP1 164 aaKnown RBP7.33□□□□□ -1.24
TMEM39A-208ENST00000486159 RSG1Q9BU20 258 aa7.33□□□□□ -1.24
TMEM39A-208ENST00000486159 NPCDR1Q9BY65 106 aa7.33□□□□□ -1.24
TMEM39A-208ENST00000486159 RPRMQ9NS64 109 aa7.33□□□□□ -1.24
TMEM39A-208ENST00000486159 MOB4Q9Y3A3 225 aa7.33□□□□□ -1.24
TMEM39A-208ENST00000486159 RYR1P21817 5038 aa7.33□□□□□ -1.24
TMEM39A-208ENST00000486159 PCLOQ9Y6V0 5065 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 CTXND1A0A1B0GTU2 59 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 CORTO00230 105 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 RRHO14718 337 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 CYB5BO43169 146 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 ACTL6BO94805 426 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 CA2P00918 260 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 IFNA1P01562 189 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 CRYGBP07316 175 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 TMEM11P17152 192 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 PPT1P50897 306 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 EGFEM1PQ0D2K5 195 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 PRSS8Q16651 343 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 DEFB136Q30KP8 78 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 SPINK9Q5DT21 86 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 SPSB3Q6PJ21 355 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 TEPPQ6URK8 271 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 OR10G4Q8NGN3 311 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 SFT2D1Q8WV19 159 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 HINT2Q9BX68 163 aa7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 ACTR3CQ9C0K3 210 aaPredicted RBP7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 EIF5A2Q9GZV4 153 aaKnown RBP7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 ZNF430Q9H8G1 570 aaPredicted RBP7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 LSM4Q9Y4Z0 139 aaKnown RBP7.32□□□□□ -1.24
TMEM39A-208ENST00000486159 RBFOX3A6NFN3 312 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 SEC14L6B5MCN3 397 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 F8W036 122 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 SLC25A17O43808 307 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 SNAPINO95295 136 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 APOC3P02656 99 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 HSPB1P04792 205 aaKnown RBP7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 FAM106CPP0CH98 169 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 RNASE2P10153 161 aaKnown RBP7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 FHITP49789 147 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 PSG5Q15238 335 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 KHDC3LQ587J8 217 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 ZNF506Q5JVG8 444 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 ETFRF1Q6IPR1 90 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 TMEM144Q7Z5S9 345 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 ZNF114Q8NC26 417 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 KLHL30-AS1Q8NEE0 82 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 TMEM170AQ8WVE7 144 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 RCC1LQ96I51 464 aaKnown RBP7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 EAF1Q96JC9 268 aaPredicted RBP7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 SCRT1Q9BWW7 348 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 SLC35B3Q9H1N7 401 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 SLC39A9Q9NUM3 307 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 HYDINQ4G0P3 5121 aa7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 HUWE1Q7Z6Z7 4374 aaKnown RBP7.31□□□□□ -1.24
TMEM39A-208ENST00000486159 AGPAT2O15120 278 aa7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 MOSP00540 346 aa7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 GHRHP01286 108 aa7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 SFTA3P0C7M3 94 aa7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 RPL27AP46776 148 aaKnown RBP7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 RPL29P47914 159 aaKnown RBP7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 CD69Q07108 199 aa7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 FFAR4Q5NUL3 377 aa7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 PVRIGQ6DKI7 326 aa7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 SLC35E3Q7Z769 313 aa7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 PPP1R27Q86WC6 154 aa7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 Q8N9W7 124 aa7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 NPBQ8NG41 125 aa7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 OR10G9Q8NGN4 311 aa7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 OR10G7Q8NGN6 311 aa7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 OR1L6Q8NGR2 347 aa7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 OR2T10Q8NGZ9 312 aa7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 RAX2Q96IS3 184 aa7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 SLC35E1Q96K37 410 aa7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 P2RX4Q99571 388 aa7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 HSPB9Q9BQS6 159 aa7.3□□□□□ -1.24
TMEM39A-208ENST00000486159 SMCO3A2RU48 225 aa7.29□□□□□ -1.24
TMEM39A-208ENST00000486159 MAP1LC3B2A6NCE7 125 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms