RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 SRD5A3Q9H8P0 318 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 LYSTQ99698 3801 aa5.21□□□□□ -1.57
VPS50-218ENST00000485994 LOC102724200A0A096LPH7 203 aaPredicted RBP5.21□□□□□ -1.58
VPS50-218ENST00000485994 RPS10-NUDT3A0A1W2PQS6 291 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 A0A1W2PS18 150 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 NAP1L6A6NFF2 107 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 OR4C46A6NHA9 309 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 PITX3O75364 302 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 SCGB2A1O75556 95 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 SCAF4O95104 1147 aaKnown RBP5.21□□□□□ -1.58
VPS50-218ENST00000485994 SULT1A3P0DMM9 295 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 SULT1A4P0DMN0 295 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 CRYBB3P26998 211 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 HOXA1P49639 335 aaPredicted RBP5.21□□□□□ -1.58
VPS50-218ENST00000485994 UBE2MP61081 183 aaKnown RBP5.21□□□□□ -1.58
VPS50-218ENST00000485994 YPEL3P61236 119 aaPredicted RBP5.21□□□□□ -1.58
VPS50-218ENST00000485994 TNFRSF9Q07011 255 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 MLANAQ16655 118 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 PYDC2Q56P42 97 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 SPANXN2Q5MJ10 180 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 Q6ZWC4 215 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 UBAC2Q8NBM4 344 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 C20orf24Q9BUV8 137 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 MCUBQ9NWR8 336 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 HSPB7Q9UBY9 170 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 CACNG5Q9UF02 275 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 TP53TG1Q9Y2A0 90 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 TENM2Q9NT68 2774 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 STARD9Q9P2P6 4700 aa5.21□□□□□ -1.58
VPS50-218ENST00000485994 AGRNO00468 2067 aa5.2□□□□□ -1.58
VPS50-218ENST00000485994 DYNC2H1Q8NCM8 4307 aaKnown RBP5.2□□□□□ -1.58
VPS50-218ENST00000485994 FAM90A26D6RGX4 464 aa5.2□□□□□ -1.58
VPS50-218ENST00000485994 DFFBO76075 338 aa5.2□□□□□ -1.58
VPS50-218ENST00000485994 IGKV1-17P01599 117 aa5.2□□□□□ -1.58
VPS50-218ENST00000485994 LYL1P12980 280 aa5.2□□□□□ -1.58
VPS50-218ENST00000485994 AKR1C4P17516 323 aa5.2□□□□□ -1.58
VPS50-218ENST00000485994 ATF4P18848 351 aaPredicted RBP5.2□□□□□ -1.58
VPS50-218ENST00000485994 NPPCP23582 126 aa5.2□□□□□ -1.58
VPS50-218ENST00000485994 GPX4P36969 197 aaPredicted RBP5.2□□□□□ -1.58
VPS50-218ENST00000485994 PAFAH1B2P68402 229 aa5.2□□□□□ -1.58
VPS50-218ENST00000485994 SMCO1Q147U7 214 aa5.2□□□□□ -1.58
VPS50-218ENST00000485994 BAK1Q16611 211 aa5.2□□□□□ -1.58
VPS50-218ENST00000485994 SPINK9Q5DT21 86 aa5.2□□□□□ -1.58
VPS50-218ENST00000485994 LINC00299Q6ZSB3 139 aa5.2□□□□□ -1.58
VPS50-218ENST00000485994 LYZL2Q7Z4W2 148 aa5.2□□□□□ -1.58
VPS50-218ENST00000485994 RNASE11Q8TAA1 199 aaKnown RBP5.2□□□□□ -1.58
VPS50-218ENST00000485994 TMEM170AQ8WVE7 144 aa5.2□□□□□ -1.58
VPS50-218ENST00000485994 PINX1Q96BK5 328 aaKnown RBP5.2□□□□□ -1.58
VPS50-218ENST00000485994 RNF2Q99496 336 aa5.2□□□□□ -1.58
VPS50-218ENST00000485994 GGTLC1Q9BX51 225 aa5.2□□□□□ -1.58
VPS50-218ENST00000485994 TMEM231Q9H6L2 316 aa5.2□□□□□ -1.58
VPS50-218ENST00000485994 HEYLQ9NQ87 328 aaPredicted RBP5.2□□□□□ -1.58
VPS50-218ENST00000485994 PUS1Q9Y606 427 aaKnown RBP eCLIP5.2□□□□□ -1.58
VPS50-218ENST00000485994 U3KQE9 123 aa5.2□□□□□ -1.58
VPS50-218ENST00000485994 RYR3Q15413 4870 aa5.2□□□□□ -1.58
VPS50-218ENST00000485994 CEBPZOSA8MTT3 80 aa5.19□□□□□ -1.58
VPS50-218ENST00000485994 YIF1AO95070 293 aa5.19□□□□□ -1.58
VPS50-218ENST00000485994 SFT2D2O95562 160 aa5.19□□□□□ -1.58
VPS50-218ENST00000485994 GHRHP01286 108 aa5.19□□□□□ -1.58
VPS50-218ENST00000485994 IGHV3-48P01763 117 aa5.19□□□□□ -1.58
VPS50-218ENST00000485994 IGLC1P0CG04 106 aa5.19□□□□□ -1.58
VPS50-218ENST00000485994 OPRK1P41145 380 aa5.19□□□□□ -1.58
VPS50-218ENST00000485994 RBMS2Q15434 407 aaKnown RBP5.19□□□□□ -1.58
VPS50-218ENST00000485994 ODF3L2Q3SX64 289 aa5.19□□□□□ -1.58
VPS50-218ENST00000485994 PRSS54Q6PEW0 395 aa5.19□□□□□ -1.58
VPS50-218ENST00000485994 LILRB2Q8N423 598 aa5.19□□□□□ -1.58
VPS50-218ENST00000485994 SLC24A4Q8NFF2 622 aa5.19□□□□□ -1.58
VPS50-218ENST00000485994 OR1S2Q8NGQ3 325 aa5.19□□□□□ -1.58
VPS50-218ENST00000485994 Q8WTZ3 238 aa5.19□□□□□ -1.58
VPS50-218ENST00000485994 C7orf50Q9BRJ6 194 aaKnown RBP5.19□□□□□ -1.58
VPS50-218ENST00000485994 OVOL2Q9BRP0 275 aa5.19□□□□□ -1.58
VPS50-218ENST00000485994 WFDC10AQ9H1F0 79 aa5.19□□□□□ -1.58
VPS50-218ENST00000485994 SEPSECSQ9HD40 501 aaKnown RBP5.19□□□□□ -1.58
VPS50-218ENST00000485994 PTTG2Q9NZH5 202 aa5.19□□□□□ -1.58
VPS50-218ENST00000485994 MRPL36Q9P0J6 103 aaKnown RBP5.19□□□□□ -1.58
VPS50-218ENST00000485994 TMED3Q9Y3Q3 217 aa5.19□□□□□ -1.58
VPS50-218ENST00000485994 ZNF207O43670 478 aaKnown RBP5.18□□□□□ -1.58
VPS50-218ENST00000485994 MED6O75586 246 aa5.18□□□□□ -1.58
VPS50-218ENST00000485994 APOHP02749 345 aaPredicted RBP5.18□□□□□ -1.58
VPS50-218ENST00000485994 NPY1RP25929 384 aa5.18□□□□□ -1.58
VPS50-218ENST00000485994 AP2S1P53680 142 aaPredicted RBP5.18□□□□□ -1.58
VPS50-218ENST00000485994 APOC4P55056 127 aa5.18□□□□□ -1.58
VPS50-218ENST00000485994 CENPSQ8N2Z9 138 aa5.18□□□□□ -1.58
VPS50-218ENST00000485994 STPG3Q8N7X2 389 aa5.18□□□□□ -1.58
VPS50-218ENST00000485994 DTD1Q8TEA8 209 aa5.18□□□□□ -1.58
VPS50-218ENST00000485994 RNF183Q96D59 192 aa5.18□□□□□ -1.58
VPS50-218ENST00000485994 GRAMD2BQ96HH9 432 aa5.18□□□□□ -1.58
VPS50-218ENST00000485994 CIB3Q96Q77 187 aaPredicted RBP5.18□□□□□ -1.58
VPS50-218ENST00000485994 METTL26Q96S19 204 aa5.18□□□□□ -1.58
VPS50-218ENST00000485994 MAP6D1Q9H9H5 199 aa5.18□□□□□ -1.58
VPS50-218ENST00000485994 SACSQ9NZJ4 4579 aa5.18□□□□□ -1.58
VPS50-218ENST00000485994 IGHV3OR16-8A0A075B7F1 116 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 CENPXA8MT69 81 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 PLA2G10O15496 165 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 NDUFB6O95139 128 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 NXPH3O95157 252 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 TOMM40O96008 361 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 IFNA10P01566 189 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 IL7P13232 177 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 OR10J1P30954 320 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms