RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 CCL3L1P16619 93 aa18.16■□□□□ 0.5
CLN5-202ENST00000485938 HNRNPA3P51991 378 aaKnown RBP18.16■□□□□ 0.5
CLN5-202ENST00000485938 KLHDC1Q8N7A1 406 aa18.16■□□□□ 0.5
CLN5-202ENST00000485938 MRPL36Q9P0J6 103 aaKnown RBP18.16■□□□□ 0.5
CLN5-202ENST00000485938 PPIAL4AQ9Y536 164 aa18.16■□□□□ 0.5
CLN5-202ENST00000485938 OR2J3O76001 311 aa18.15■□□□□ 0.5
CLN5-202ENST00000485938 MEF2CQ06413 473 aaPredicted RBP18.15■□□□□ 0.5
CLN5-202ENST00000485938 PRR27Q6MZM9 219 aa18.15■□□□□ 0.5
CLN5-202ENST00000485938 ZNF841Q6ZN19 808 aa18.15■□□□□ 0.5
CLN5-202ENST00000485938 ATOH7Q8N100 152 aa18.15■□□□□ 0.5
CLN5-202ENST00000485938 OR4A5Q8NH83 315 aa18.15■□□□□ 0.5
CLN5-202ENST00000485938 ALKBH7Q9BT30 221 aaPredicted RBP18.15■□□□□ 0.5
CLN5-202ENST00000485938 LAMTOR2Q9Y2Q5 125 aa18.15■□□□□ 0.5
CLN5-202ENST00000485938 ARFGEF3Q5TH69 2177 aa18.15■□□□□ 0.5
CLN5-202ENST00000485938 NKX6-3A6NJ46 265 aa18.15■□□□□ 0.5
CLN5-202ENST00000485938 GNG5P63218 68 aa18.15■□□□□ 0.5
CLN5-202ENST00000485938 DEFB124Q8NES8 71 aa18.15■□□□□ 0.5
CLN5-202ENST00000485938 OR4C13Q8NGP0 309 aa18.15■□□□□ 0.5
CLN5-202ENST00000485938 CHRDL1Q9BU40 450 aa18.15■□□□□ 0.5
CLN5-202ENST00000485938 SAP30LQ9HAJ7 183 aa18.15■□□□□ 0.5
CLN5-202ENST00000485938 FAM181BA6NEQ2 426 aa18.14■□□□□ 0.49
CLN5-202ENST00000485938 HSBP1O75506 76 aa18.14■□□□□ 0.49
CLN5-202ENST00000485938 MAJINQ3KP22 176 aa18.14■□□□□ 0.49
CLN5-202ENST00000485938 TNFRSF19Q9NS68 423 aa18.14■□□□□ 0.49
CLN5-202ENST00000485938 HIGD1CA8MV81 97 aa18.14■□□□□ 0.49
CLN5-202ENST00000485938 CORTO00230 105 aa18.14■□□□□ 0.49
CLN5-202ENST00000485938 HIST1H1EP10412 219 aaKnown RBP18.14■□□□□ 0.49
CLN5-202ENST00000485938 CD40P25942 277 aa18.14■□□□□ 0.49
CLN5-202ENST00000485938 CCL8P80075 99 aa18.14■□□□□ 0.49
CLN5-202ENST00000485938 PMCHL1Q16048 86 aa18.14■□□□□ 0.49
CLN5-202ENST00000485938 C11orf42Q8N5U0 333 aa18.14■□□□□ 0.49
CLN5-202ENST00000485938 VSTM2AQ8TAG5 236 aa18.14■□□□□ 0.49
CLN5-202ENST00000485938 SSBP4Q9BWG4 385 aaPredicted RBP18.14■□□□□ 0.49
CLN5-202ENST00000485938 ZFHX4Q86UP3 3567 aa18.13■□□□□ 0.49
CLN5-202ENST00000485938 SPAARA0A1B0GVQ0 90 aa18.13■□□□□ 0.49
CLN5-202ENST00000485938 VWC2LB2RUY7 222 aa18.13■□□□□ 0.49
CLN5-202ENST00000485938 FCN3O75636 299 aa18.13■□□□□ 0.49
CLN5-202ENST00000485938 GPR6P46095 362 aaPredicted RBP18.13■□□□□ 0.49
CLN5-202ENST00000485938 SUB1P53999 127 aaKnown RBP eCLIP18.13■□□□□ 0.49
CLN5-202ENST00000485938 DIAPH2-AS1Q14236 149 aa18.13■□□□□ 0.49
CLN5-202ENST00000485938 EBLN2Q6P2I7 272 aa18.13■□□□□ 0.49
CLN5-202ENST00000485938 LINC00305Q7Z4B0 112 aa18.13■□□□□ 0.49
CLN5-202ENST00000485938 CEACAM4O75871 244 aa18.12■□□□□ 0.49
CLN5-202ENST00000485938 PLAUP00749 431 aa18.12■□□□□ 0.49
CLN5-202ENST00000485938 IGLV2-23P01705 113 aa18.12■□□□□ 0.49
CLN5-202ENST00000485938 TMEM200BQ69YZ2 307 aa18.12■□□□□ 0.49
CLN5-202ENST00000485938 PDPNQ86YL7 162 aa18.12■□□□□ 0.49
CLN5-202ENST00000485938 EPDR1Q9UM22 224 aa18.12■□□□□ 0.49
CLN5-202ENST00000485938 A0A1B0GXF2 115 aa18.12■□□□□ 0.49
CLN5-202ENST00000485938 NDUFB8O95169 186 aa18.12■□□□□ 0.49
CLN5-202ENST00000485938 FAM27E3Q08E93 113 aa18.12■□□□□ 0.49
CLN5-202ENST00000485938 C1orf185Q5T7R7 199 aa18.12■□□□□ 0.49
CLN5-202ENST00000485938 ATP5L2Q7Z4Y8 100 aa18.12■□□□□ 0.49
CLN5-202ENST00000485938 ZADH2Q8N4Q0 377 aa18.12■□□□□ 0.49
CLN5-202ENST00000485938 RBMXL3Q8N7X1 1067 aaKnown RBP18.12■□□□□ 0.49
CLN5-202ENST00000485938 OR8B3Q8NGG8 313 aa18.12■□□□□ 0.49
CLN5-202ENST00000485938 OR8B2Q96RD0 313 aa18.12■□□□□ 0.49
CLN5-202ENST00000485938 ZNF318Q5VUA4 2279 aa18.11■□□□□ 0.49
CLN5-202ENST00000485938 M0R2Z0 102 aa18.11■□□□□ 0.49
CLN5-202ENST00000485938 KLF12Q9Y4X4 402 aa18.11■□□□□ 0.49
CLN5-202ENST00000485938 TSPOP30536 169 aa18.11■□□□□ 0.49
CLN5-202ENST00000485938 CAMPP49913 170 aa18.11■□□□□ 0.49
CLN5-202ENST00000485938 UBE2G1P62253 170 aa18.11■□□□□ 0.49
CLN5-202ENST00000485938 RNASEKQ6P5S7 137 aaKnown RBP18.11■□□□□ 0.49
CLN5-202ENST00000485938 OR10X1Q8NGY0 326 aa18.11■□□□□ 0.49
CLN5-202ENST00000485938 DMRTA1Q5VZB9 504 aa18.1■□□□□ 0.49
CLN5-202ENST00000485938 PIP4P1Q86T03 277 aa18.1■□□□□ 0.49
CLN5-202ENST00000485938 ZCCHC24Q8N2G6 241 aaKnown RBP18.1■□□□□ 0.49
CLN5-202ENST00000485938 SIAH2O43255 324 aa18.1■□□□□ 0.49
CLN5-202ENST00000485938 MRPS16Q9Y3D3 137 aaKnown RBP18.1■□□□□ 0.49
CLN5-202ENST00000485938 CFAP47Q6ZTR5 3102 aa18.09■□□□□ 0.49
CLN5-202ENST00000485938 TRAV9-2A0A087WT02 112 aa18.09■□□□□ 0.49
CLN5-202ENST00000485938 C2orf70A6NJV1 201 aa18.09■□□□□ 0.49
CLN5-202ENST00000485938 C22orf46C9J442 243 aa18.09■□□□□ 0.49
CLN5-202ENST00000485938 SLC25A5P05141 298 aaKnown RBP18.09■□□□□ 0.49
CLN5-202ENST00000485938 FAM71F2Q6NXP2 309 aa18.09■□□□□ 0.49
CLN5-202ENST00000485938 NUP37Q8NFH4 326 aa18.09■□□□□ 0.49
CLN5-202ENST00000485938 STXBP6Q8NFX7 210 aa18.09■□□□□ 0.49
CLN5-202ENST00000485938 SMIM12Q96EX1 92 aa18.09■□□□□ 0.49
CLN5-202ENST00000485938 WASHC3Q9Y3C0 194 aa18.09■□□□□ 0.49
CLN5-202ENST00000485938 A0A1W2PPI3 338 aa18.09■□□□□ 0.49
CLN5-202ENST00000485938 TNFRSF1AP19438 455 aa18.09■□□□□ 0.49
CLN5-202ENST00000485938 Q56UQ5 140 aa18.09■□□□□ 0.49
CLN5-202ENST00000485938 RUSC1-AS1Q66K80 236 aa18.09■□□□□ 0.49
CLN5-202ENST00000485938 BLNKQ8WV28 456 aa18.09■□□□□ 0.49
CLN5-202ENST00000485938 ST6GALNAC6Q969X2 333 aa18.09■□□□□ 0.49
CLN5-202ENST00000485938 PERPQ96FX8 193 aa18.09■□□□□ 0.49
CLN5-202ENST00000485938 SGK494Q96LW2 274 aa18.09■□□□□ 0.49
CLN5-202ENST00000485938 MLST8Q9BVC4 326 aa18.09■□□□□ 0.49
CLN5-202ENST00000485938 SSUH2Q9Y2M2 353 aa18.09■□□□□ 0.49
CLN5-202ENST00000485938 FTH1P19P0C7X4 201 aa18.08■□□□□ 0.48
CLN5-202ENST00000485938 TMEM186Q96B77 213 aa18.08■□□□□ 0.48
CLN5-202ENST00000485938 URB1-AS1Q96HZ7 61 aa18.08■□□□□ 0.48
CLN5-202ENST00000485938 GPR82Q96P67 336 aa18.08■□□□□ 0.48
CLN5-202ENST00000485938 RBM14Q96PK6 669 aaKnown RBP18.08■□□□□ 0.48
CLN5-202ENST00000485938 TPSG1Q9NRR2 321 aa18.08■□□□□ 0.48
CLN5-202ENST00000485938 PGPA6NDG6 321 aa18.07■□□□□ 0.48
CLN5-202ENST00000485938 MOSP00540 346 aa18.07■□□□□ 0.48
CLN5-202ENST00000485938 ORM2P19652 201 aa18.07■□□□□ 0.48
CLN5-202ENST00000485938 CA7P43166 264 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms