RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 SLC35B1P78383 322 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 HIST1H1AQ02539 215 aaPredicted RBP3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 EDDM3AQ14507 147 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 C17orf58Q2M2W7 97 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 CT45A1Q5HYN5 189 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 TMEM200BQ69YZ2 307 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 RNASEKQ6P5S7 137 aaKnown RBP3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 SLC25A34Q6PIV7 304 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 C16orf54Q6UWD8 224 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 CXorf67Q86X51 503 aaPredicted RBP3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 THAP8Q8NA92 274 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 STXBP6Q8NFX7 210 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 CT45A3Q8NHU0 189 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 FAM222BQ8WU58 562 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 H1FXQ92522 213 aaKnown RBP3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 FXYD5Q96DB9 178 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 SNRNP40Q96DI7 357 aaKnown RBP3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 MLST8Q9BVC4 326 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 PRSS22Q9GZN4 317 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 TMEM191AQ9H0A3 160 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 MS4A6AQ9H2W1 248 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 RPP21Q9H633 154 aaKnown RBP3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 ZNF430Q9H8G1 570 aaPredicted RBP3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 SCRT2Q9NQ03 307 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 SERTAD4Q9NUC0 356 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 DNAH14Q0VDD8 3507 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 CDH23Q9H251 3354 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 LOC102724200A0A096LPH7 203 aaPredicted RBP3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 TRGV5A0A0B4J1U4 118 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 IGHV3-64DA0A0J9YX35 117 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 TRBV6-1A0A0K0K1D8 114 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 KBTBD11-OT1A0A1B0GTJ5 212 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 TEX50A0A1B0GTY4 177 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 TCRBV4S1A1TA0A5B7 111 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 C19orf71A6NCJ1 209 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 HIGD1CA8MV81 97 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 VWC2LB2RUY7 222 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 CD5LO43866 347 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 COX7A2P2O60397 106 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 LHBP01229 141 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 LTAP01374 205 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 IGHG3P01860 377 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 CECR9P0C854 216 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 SP9P0CG40 484 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 COL8A2P25067 703 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 CEACAM3P40198 252 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 SEC11AP67812 179 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 HOXA4Q00056 320 aaPredicted RBP3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 PAX2Q02962 417 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 VAMP3Q15836 100 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 LTC4SQ16873 150 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 MPV17L2Q567V2 206 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 OCIAD2Q56VL3 154 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 LINC01545Q5VT33 79 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 MORN5Q5VZ52 161 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 C10orf113Q5VZT2 155 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 PVRIGQ6DKI7 326 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 FAM71F2Q6NXP2 309 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 ZNF841Q6ZN19 808 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 SLC25A48Q6ZT89 311 aaKnown RBP3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 ZNF833PQ6ZTB9 187 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 Q6ZVH6 145 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 SSX8Q7RTT4 187 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 TCF24Q7RTU0 167 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 KIR3DL3Q8N743 410 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 OR4A5Q8NH83 315 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 OR9G1Q8NH87 305 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 OSR1Q8TAX0 266 aaPredicted RBP3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 GPR82Q96P67 336 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 NDFIP1Q9BT67 221 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 PAXXQ9BUH6 204 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 FAM234AQ9H0X4 552 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 CST9LQ9H4G1 147 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 NDUFA4L2Q9NRX3 87 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 ZNF355PQ9NSJ1 428 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 CLEC5AQ9NY25 188 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 DKK4Q9UBT3 224 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 HSPB8Q9UJY1 196 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 ZNF835Q9Y2P0 537 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 CACNA1EQ15878 2313 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 KNL1Q8NG31 2342 aa3.77□□□□□ -1.81
SMARCC1-206ENST00000485737 IGKV1D-37A0A075B6S9 117 aa3.76□□□□□ -1.81
SMARCC1-206ENST00000485737 IGHV1-18A0A0C4DH31 117 aa3.76□□□□□ -1.81
SMARCC1-206ENST00000485737 MUC21A0A0G2JKD1 596 aa3.76□□□□□ -1.81
SMARCC1-206ENST00000485737 MUC21A0A140T8X8 626 aa3.76□□□□□ -1.81
SMARCC1-206ENST00000485737 A0A1B0GW15 77 aa3.76□□□□□ -1.81
SMARCC1-206ENST00000485737 A8MWL6 223 aa3.76□□□□□ -1.81
SMARCC1-206ENST00000485737 HSBP1L1C9JCN9 74 aa3.76□□□□□ -1.81
SMARCC1-206ENST00000485737 K7ERU9 68 aa3.76□□□□□ -1.81
SMARCC1-206ENST00000485737 M0R296 226 aa3.76□□□□□ -1.81
SMARCC1-206ENST00000485737 OVOL3O00110 214 aa3.76□□□□□ -1.81
SMARCC1-206ENST00000485737 CORTO00230 105 aa3.76□□□□□ -1.81
SMARCC1-206ENST00000485737 LYZL6O75951 148 aa3.76□□□□□ -1.81
SMARCC1-206ENST00000485737 LEPROTL1O95214 131 aa3.76□□□□□ -1.81
SMARCC1-206ENST00000485737 APOHP02749 345 aaPredicted RBP3.76□□□□□ -1.81
SMARCC1-206ENST00000485737 CFIP05156 583 aa3.76□□□□□ -1.81
SMARCC1-206ENST00000485737 ZNF883P0CG24 379 aa3.76□□□□□ -1.81
SMARCC1-206ENST00000485737 SAA1P0DJI8 122 aaPredicted RBP3.76□□□□□ -1.81
SMARCC1-206ENST00000485737 CT45A6P0DMU7 189 aa3.76□□□□□ -1.81
SMARCC1-206ENST00000485737 CT45A5P0DMU8 189 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms