RNA–Protein interactions for RNA: ENST00000485365.1

SFPQ-208, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 693 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-208	ENST00000485365	TMEM229B	Q8NBD8	167 aa		3.59	□□□□□ -1.83
SFPQ-208	ENST00000485365	UBAC2	Q8NBM4	344 aa		3.59	□□□□□ -1.83
SFPQ-208	ENST00000485365	TMEM116	Q8NCL8	245 aa		3.59	□□□□□ -1.83
SFPQ-208	ENST00000485365	OR10W1	Q8NGF6	305 aa		3.59	□□□□□ -1.83
SFPQ-208	ENST00000485365	OR4D10	Q8NGI6	311 aa		3.59	□□□□□ -1.83
SFPQ-208	ENST00000485365	TMEM167A	Q8TBQ9	72 aa		3.59	□□□□□ -1.83
SFPQ-208	ENST00000485365	MARCH1	Q8TCQ1	289 aa		3.59	□□□□□ -1.83
SFPQ-208	ENST00000485365	PDCD10	Q9BUL8	212 aa		3.59	□□□□□ -1.83
SFPQ-208	ENST00000485365	ZMAT5	Q9UDW3	170 aa	Known RBP	3.59	□□□□□ -1.83
SFPQ-208	ENST00000485365	MTFP1	Q9UDX5	166 aa		3.59	□□□□□ -1.83
SFPQ-208	ENST00000485365	OR51B2	Q9Y5P1	312 aa		3.59	□□□□□ -1.83
SFPQ-208	ENST00000485365	IGHV3-35	A0A0C4DH35	117 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	C3orf85	A0A1B0GTC6	90 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365		H3BUA1	57 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	CYB5B	O43169	146 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	TSC22D2	O75157	780 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	OR2C1	O95371	312 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	IFNA17	P01571	189 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	TRBV12-3	P01733	135 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	C1QB	P02746	253 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	CLEC3B	P05452	202 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	AREG	P15514	252 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	AKR1C4	P17516	323 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	ZP3	P21754	424 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	PSMB6	P28072	239 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	MRPS10	P82664	201 aa	Known RBP	3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	EIF4EBP1	Q13541	118 aa	Predicted RBP	3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	MEF2D	Q14814	521 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	C15orf32	Q32M92	178 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	VAX1	Q5SQQ9	334 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	TRIQK	Q629K1	86 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	LAMTOR1	Q6IAA8	161 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	PUSL1	Q8N0Z8	303 aa	Known RBP	3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	TOMM5	Q8N4H5	51 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	TTC9C	Q8N5M4	171 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	GDPD1	Q8N9F7	314 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	CCDC71L	Q8N9Z2	235 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	ADAD2	Q8NCV1	583 aa	Known RBP	3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	OR51S1	Q8NGJ8	323 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	OR1L8	Q8NGR8	309 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	OR13C8	Q8NGS7	320 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	OR4A5	Q8NH83	315 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	TERB2	Q8NHR7	220 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	DYNLRB2	Q8TF09	96 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	DEDD2	Q8WXF8	326 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	MRGPRF	Q96AM1	343 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	EEF1AKMT3	Q96AZ1	226 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	PINX1	Q96BK5	328 aa	Known RBP	3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	USMG5	Q96IX5	58 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	ASCL2	Q99929	193 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	ENY2	Q9NPA8	101 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	SLC2A9	Q9NRM0	540 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	BET1L	Q9NYM9	111 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	SCP2D1	Q9UJQ7	156 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	ANAPC10	Q9UM13	185 aa		3.58	□□□□□ -1.84
SFPQ-208	ENST00000485365	FAM223B	A6NKX1	122 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365		K7EIL1	84 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	RBFOX2	O43251	390 aa	Known RBP eCLIP	3.57	□□□□□ -1.84	2e-14	■■■□□ 15
SFPQ-208	ENST00000485365	LYRM1	O43325	122 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	GGCT	O75223	188 aa	Known RBP	3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	SCO1	O75880	301 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	ATG12	O94817	140 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	YIF1A	O95070	293 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	IGHV3-48	P01763	117 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	OR5AC1	P0C628	307 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	ZNF735	P0CB33	412 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	FAU	P35544	74 aa	Known RBP	3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	ARL3	P36405	182 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	HOXA1	P49639	335 aa	Predicted RBP	3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	AP2S1	P53680	142 aa	Predicted RBP	3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	RRAS2	P62070	204 aa	Predicted RBP	3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	ERH	P84090	104 aa	Known RBP	3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	RUNX1	Q01196	453 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	MSMO1	Q15800	293 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	GUCA2B	Q16661	112 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365		Q56UQ5	140 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	MZT2B	Q6NZ67	158 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	PLET1	Q6UQ28	207 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	ZNF767P	Q75MW2	155 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	TMED4	Q7Z7H5	227 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	ZNF429	Q86V71	674 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	FAM223A	Q8IWN6	122 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	SGPP2	Q8IWX5	399 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365		Q8N402	240 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	C9orf62	Q8N4C0	152 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	ARRDC1	Q8N5I2	433 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	NECAP1	Q8NC96	275 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	OR4C16	Q8NGL9	310 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	LRRC20	Q8TCA0	184 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	SMIM4	Q8WVI0	70 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	TMEM56	Q96MV1	263 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	SCGB3A2	Q96PL1	93 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	TP53RK	Q96S44	253 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	FKBP11	Q9NYL4	201 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	COMMD9	Q9P000	198 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	THYN1	Q9P016	225 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	RABL2A	Q9UBK7	228 aa	Predicted RBP	3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	PRND	Q9UKY0	176 aa		3.57	□□□□□ -1.84
SFPQ-208	ENST00000485365	RABL2B	Q9UNT1	228 aa		3.57	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms