RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 TRAV14DV4A0A0A6YYC5 116 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 IGHV3-66A0A0C4DH42 116 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 TMEM235A6NFC5 223 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 IFITM5A6NNB3 132 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 K7EIM0 57 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 ST8SIA3O43173 380 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 IFNA10P01566 189 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 C4BPBP20851 252 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 GNG2P59768 71 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 ARPC4P59998 168 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 ERVK-16P61578 105 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 CATR1Q13166 79 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 ZNF846Q147U1 533 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 ARL6IP1Q15041 203 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 IZUMO4Q1ZYL8 232 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 LGALS9BQ3B8N2 356 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 CDNFQ49AH0 187 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 HACD4Q5VWC8 232 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 THOC7Q6I9Y2 204 aaKnown RBP4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 HSD17B13Q7Z5P4 300 aaPredicted RBP4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 SNX29P2Q8IUI4 249 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 CROCCP3Q8IVE0 287 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 FAM24BQ8N5W8 94 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 MAPKAPK5-AS1Q8N8E1 139 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 OR1L8Q8NGR8 309 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 LSM10Q969L4 123 aaKnown RBP4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 OR10C1Q96KK4 312 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 BCL7BQ9BQE9 202 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 MS4A6AQ9H2W1 248 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 CLEC5AQ9NY25 188 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 RABAC1Q9UI14 185 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 ANXA10Q9UJ72 324 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 TEX50A0A1B0GTY4 177 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 SMIM30A4D0T7 59 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 C16orf90A8MZG2 172 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 PDCD5O14737 125 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 RBFOX2O43251 390 aaKnown RBP eCLIP4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 PFDN1O60925 122 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 DFFBO76075 338 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 HPRT1P00492 218 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 IFNA21P01568 189 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 IFNA17P01571 189 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 IGHV3-48P01763 117 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 CTSGP08311 255 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 PTHLHP12272 177 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 MYL9P24844 172 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 FCGR2CP31995 323 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 AMTP48728 403 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 FXYD4P59646 89 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 TMEM41BQ5BJD5 291 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 SOHLH1Q5JUK2 328 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 AADACL3Q5VUY0 350 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 MCFD2Q8NI22 146 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 TMED6Q8WW62 240 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 SLC25A46Q96AG3 418 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 ZNF414Q96IQ9 312 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 ATP6V0BQ99437 205 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 MGLLQ99685 303 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 GINS3Q9BRX5 216 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 SCRT1Q9BWW7 348 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 SLIRPQ9GZT3 109 aaKnown RBP4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 SLC5A7Q9GZV3 580 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 TBC1D24Q9ULP9 559 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 NSG2Q9Y328 171 aa4.3□□□□□ -1.72
SEMA3D-204ENST00000484038 KNCNA6PVL3 124 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 ZNF705EA8MWA4 302 aaPredicted RBP4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 GNG7O60262 68 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 PPYP01298 95 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 APOHP02749 345 aaPredicted RBP4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 CD5P06127 495 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 FCER2P06734 321 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 GIG44P09565 113 aaPredicted RBP4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 ZNF688P0C7X2 276 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 SPP1P10451 314 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 RAB3BP20337 219 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 MFAP4P55083 255 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 IFITM3Q01628 133 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 MLLT11Q13015 90 aaPredicted RBP4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 POU2AF1Q16633 256 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 C12orf74Q32Q52 190 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 MORN3Q6PF18 240 aaPredicted RBP4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 TRPT1Q86TN4 253 aaKnown RBP4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 TMEM17Q86X19 198 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 STXBP6Q8NFX7 210 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 PINX1Q96BK5 328 aaKnown RBP4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 NXF2Q9GZY0 626 aaKnown RBP4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 NDUFA4L2Q9NRX3 87 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 TMEM14BQ9NUH8 114 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 COMMD9Q9P000 198 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 DAPK2Q9UIK4 370 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 PAM16Q9Y3D7 125 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 OR51B2Q9Y5P1 312 aa4.29□□□□□ -1.72
SEMA3D-204ENST00000484038 SSX5O60225 188 aa4.28□□□□□ -1.72
SEMA3D-204ENST00000484038 SNAPC5O75971 98 aa4.28□□□□□ -1.72
SEMA3D-204ENST00000484038 MT-CO2P00403 227 aa4.28□□□□□ -1.72
SEMA3D-204ENST00000484038 KRASP01116 189 aa4.28□□□□□ -1.72
SEMA3D-204ENST00000484038 RLN1P04808 185 aa4.28□□□□□ -1.72
SEMA3D-204ENST00000484038 NPY1RP25929 384 aa4.28□□□□□ -1.72
SEMA3D-204ENST00000484038 G6PCP35575 357 aa4.28□□□□□ -1.72
SEMA3D-204ENST00000484038 MSMO1Q15800 293 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms