RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 ICAM4Q14773 271 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 FXYD3Q14802 87 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 PLGLAQ15195 96 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 FAM74A3Q4VXF1 159 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 AWAT1Q58HT5 328 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 CTRB2Q6GPI1 263 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 LCN15Q6UWW0 184 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 SLC16A13Q7RTY0 426 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 DYNAPQ8N1N2 210 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 STPG3Q8N7X2 389 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 SRSF12Q8WXF0 261 aaKnown RBP4.29□□□□□ -1.72
COL17A1-206ENST00000483876 C22orf15Q8WYQ4 148 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 TMEM190Q8WZ59 177 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 TRGV9Q99603 122 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 RARRES2Q99969 163 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 NKX6-2Q9C056 277 aaPredicted RBP4.29□□□□□ -1.72
COL17A1-206ENST00000483876 TUBA4BQ9H853 241 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 DNAJC4Q9NNZ3 241 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 ARL2-SNX15V9GYD0 113 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 TENM3Q9P273 2699 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 IGKV1OR2-108A0A075B7D4 117 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 IGHV4-30-2A0A087WSY4 118 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 TRAV30A0A087WSZ9 112 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 A0A1W2PRD5 423 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 A0A1W2PRF3 423 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 A0A1W2PRM7 423 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 TCRBV4S1A1TA0A5B7 111 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 B4DEV8 164 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 I3L2K1 104 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 BRI3O95415 125 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 HLA-DRB1P01911 266 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 FABP1P07148 127 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 AREGP15514 252 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 HIST1H1BP16401 226 aaKnown RBP4.28□□□□□ -1.72
COL17A1-206ENST00000483876 TMEM11P17152 192 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 OR10J1P30954 320 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 FCGR2BP31994 310 aaPredicted RBP4.28□□□□□ -1.72
COL17A1-206ENST00000483876 SAA4P35542 130 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 MFAP2P55001 183 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 TAS2R45P59539 299 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 PLP1P60201 277 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 MEF2BQ02080 365 aaPredicted RBP4.28□□□□□ -1.72
COL17A1-206ENST00000483876 PRB3Q04118 309 aaPredicted RBP4.28□□□□□ -1.72
COL17A1-206ENST00000483876 HES1Q14469 280 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 MLANAQ16655 118 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 HAGHQ16775 308 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 C10orf55Q5SWW7 151 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 MIC13Q5XKP0 118 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 CYB5R2Q6BCY4 276 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 PQLC2Q6ZP29 291 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 CYP2G1PQ6ZSU1 146 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 SSX7Q7RTT5 188 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 LINC01356Q8N9X3 169 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 CLRN3Q8NCR9 226 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 STXBP6Q8NFX7 210 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 OR1L4Q8NGR5 311 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 OR4X1Q8NH49 305 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 OR2T6Q8NHC8 308 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 NPIPB3Q92617 1050 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 ZNF48Q96MX3 618 aaPredicted RBP4.28□□□□□ -1.72
COL17A1-206ENST00000483876 ATP6V0BQ99437 205 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 PFDN5Q99471 154 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 SLC25A33Q9BSK2 321 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 MRPL32Q9BYC8 188 aaKnown RBP4.28□□□□□ -1.72
COL17A1-206ENST00000483876 WNT10AQ9GZT5 417 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 FNDC4Q9H6D8 234 aaPredicted RBP4.28□□□□□ -1.72
COL17A1-206ENST00000483876 TMEM231Q9H6L2 316 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 C7orf69Q9H7B7 122 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 TPSG1Q9NRR2 321 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 TECRQ9NZ01 308 aaKnown RBP4.28□□□□□ -1.72
COL17A1-206ENST00000483876 THYN1Q9P016 225 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 GNG13Q9P2W3 67 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 FUT9Q9Y231 359 aa4.28□□□□□ -1.72
COL17A1-206ENST00000483876 RYR2Q92736 4967 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 ARHGAP32A7KAX9 2087 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 IGKV1D-37A0A075B6S9 117 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 A0A096LNT2 108 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 PSMB11A5LHX3 300 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 CXorf65A6NEN9 183 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 NCBP2LA6PVI3 153 aaKnown RBP4.27□□□□□ -1.73
COL17A1-206ENST00000483876 F6UZH7 168 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 M0QZK8 103 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 PDE6DO43924 150 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 OR5G3P0C626 314 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 PAX6P26367 422 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 NPBWR1P48145 328 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 YPEL3P61236 119 aaPredicted RBP4.27□□□□□ -1.73
COL17A1-206ENST00000483876 PNRC1Q12796 327 aaPredicted RBP4.27□□□□□ -1.73
COL17A1-206ENST00000483876 BTN1A1Q13410 526 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 RHEBQ15382 184 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 GUCA2BQ16661 112 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 AKIRIN2Q53H80 203 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 FAM122CQ6P4D5 195 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 ATRAIDQ6UW56 229 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 C16orf82Q7Z2V1 217 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 S100A7AQ86SG5 101 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 Q8N9W7 124 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 RXFP4Q8TDU9 374 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 ABHD5Q8WTS1 349 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 C17orf50Q8WW18 174 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms