RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 MBD3L1Q8WWY6 194 aa7.88□□□□□ -1.15
HDAC6-226ENST00000483656 RCC1LQ96I51 464 aaKnown RBP7.88□□□□□ -1.15
HDAC6-226ENST00000483656 TRGV9Q99603 122 aa7.88□□□□□ -1.15
HDAC6-226ENST00000483656 HRH4Q9H3N8 390 aa7.88□□□□□ -1.15
HDAC6-226ENST00000483656 ESM1Q9NQ30 184 aa7.88□□□□□ -1.15
HDAC6-226ENST00000483656 ZNF580Q9UK33 172 aa7.88□□□□□ -1.15
HDAC6-226ENST00000483656 PSMB11A5LHX3 300 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 DNAJC9-AS1A6NH13 148 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 ZFP92A6NM28 416 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 SEC14L6B5MCN3 397 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 AP4M1O00189 453 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 CYB5BO43169 146 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 CLN5O75503 358 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 BRI3O95415 125 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 IGKV1-17P01599 117 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 MBP02144 154 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 H2AFB1P0C5Y9 115 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 CD99P14209 185 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 FOSL1P15407 271 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 M6PRP20645 277 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 HNF1AP20823 631 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 RHOGP84095 191 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 ZNF616Q08AN1 781 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 ACOT6Q3I5F7 207 aaPredicted RBP7.87□□□□□ -1.15
HDAC6-226ENST00000483656 TIGITQ495A1 244 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 FAM122CQ6P4D5 195 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 VN1R17PQ8TDU5 208 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 ZNF414Q96IQ9 312 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 MS4A10Q96PG2 267 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 SCRT1Q9BWW7 348 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 KCNIP2Q9NS61 270 aa7.87□□□□□ -1.15
HDAC6-226ENST00000483656 TRAV1-1A0A0B4J248 108 aa7.86□□□□□ -1.15
HDAC6-226ENST00000483656 A0A1B0GV50 99 aa7.86□□□□□ -1.15
HDAC6-226ENST00000483656 IGLV1-40P01703 118 aa7.86□□□□□ -1.15
HDAC6-226ENST00000483656 IGHV3-23P01764 117 aa7.86□□□□□ -1.15
HDAC6-226ENST00000483656 FCGR2BP31994 310 aaPredicted RBP7.86□□□□□ -1.15
HDAC6-226ENST00000483656 MFAP4P55083 255 aa7.86□□□□□ -1.15
HDAC6-226ENST00000483656 SPATA31B1PQ5VZV4 182 aa7.86□□□□□ -1.15
HDAC6-226ENST00000483656 PATE2Q6UY27 113 aa7.86□□□□□ -1.15
HDAC6-226ENST00000483656 Q8N2B8 174 aa7.86□□□□□ -1.15
HDAC6-226ENST00000483656 NECAP1Q8NC96 275 aa7.86□□□□□ -1.15
HDAC6-226ENST00000483656 ZNF502Q8TBZ5 544 aa7.86□□□□□ -1.15
HDAC6-226ENST00000483656 MARC2Q969Z3 335 aa7.86□□□□□ -1.15
HDAC6-226ENST00000483656 ACTR3CQ9C0K3 210 aaPredicted RBP7.86□□□□□ -1.15
HDAC6-226ENST00000483656 PRSS22Q9GZN4 317 aa7.86□□□□□ -1.15
HDAC6-226ENST00000483656 KLK15Q9H2R5 256 aa7.86□□□□□ -1.15
HDAC6-226ENST00000483656 SLC25A22Q9H936 323 aa7.86□□□□□ -1.15
HDAC6-226ENST00000483656 ZNF355PQ9NSJ1 428 aa7.86□□□□□ -1.15
HDAC6-226ENST00000483656 C21orf62Q9NYP8 219 aa7.86□□□□□ -1.15
HDAC6-226ENST00000483656 THYN1Q9P016 225 aa7.86□□□□□ -1.15
HDAC6-226ENST00000483656 PFDN2Q9UHV9 154 aa7.86□□□□□ -1.15
HDAC6-226ENST00000483656 CTXND1A0A1B0GTU2 59 aa7.85□□□□□ -1.15
HDAC6-226ENST00000483656 H3BUA1 57 aa7.85□□□□□ -1.15
HDAC6-226ENST00000483656 HMGB3O15347 200 aaKnown RBP7.85□□□□□ -1.15
HDAC6-226ENST00000483656 NPBWR1P48145 328 aa7.85□□□□□ -1.15
HDAC6-226ENST00000483656 FGF8P55075 233 aaPredicted RBP7.85□□□□□ -1.15
HDAC6-226ENST00000483656 SELENOTP62341 195 aa7.85□□□□□ -1.15
HDAC6-226ENST00000483656 SRSF3P84103 164 aaKnown RBP7.85□□□□□ -1.15
HDAC6-226ENST00000483656 C15orf32Q32M92 178 aa7.85□□□□□ -1.15
HDAC6-226ENST00000483656 C10orf99Q6UWK7 81 aa7.85□□□□□ -1.15
HDAC6-226ENST00000483656 LCN15Q6UWW0 184 aa7.85□□□□□ -1.15
HDAC6-226ENST00000483656 RBMS3Q6XE24 437 aaKnown RBP7.85□□□□□ -1.15
HDAC6-226ENST00000483656 IL34Q6ZMJ4 242 aa7.85□□□□□ -1.15
HDAC6-226ENST00000483656 Q71RC1 249 aaPredicted RBP7.85□□□□□ -1.15
HDAC6-226ENST00000483656 EIF4E3Q8N5X7 224 aaKnown RBP7.85□□□□□ -1.15
HDAC6-226ENST00000483656 SFT2D1Q8WV19 159 aa7.85□□□□□ -1.15
HDAC6-226ENST00000483656 TMEM37Q8WXS4 190 aa7.85□□□□□ -1.15
HDAC6-226ENST00000483656 RAB24Q969Q5 203 aa7.85□□□□□ -1.15
HDAC6-226ENST00000483656 CCDC140Q96MF4 163 aa7.85□□□□□ -1.15
HDAC6-226ENST00000483656 TXN2Q99757 166 aa7.85□□□□□ -1.15
HDAC6-226ENST00000483656 NPFFR1Q9GZQ6 430 aa7.85□□□□□ -1.15
HDAC6-226ENST00000483656 RAB19A4D1S5 217 aa7.84□□□□□ -1.15
HDAC6-226ENST00000483656 MAP1LC3B2A6NCE7 125 aa7.84□□□□□ -1.15
HDAC6-226ENST00000483656 CLDN34H7C241 214 aa7.84□□□□□ -1.15
HDAC6-226ENST00000483656 TRGV3P03979 118 aa7.84□□□□□ -1.15
HDAC6-226ENST00000483656 CTSGP08311 255 aa7.84□□□□□ -1.15
HDAC6-226ENST00000483656 OR5G3P0C626 314 aa7.84□□□□□ -1.15
HDAC6-226ENST00000483656 PSG1P11464 419 aa7.84□□□□□ -1.15
HDAC6-226ENST00000483656 SRD5A1P18405 259 aa7.84□□□□□ -1.15
HDAC6-226ENST00000483656 ADMP35318 185 aa7.84□□□□□ -1.15
HDAC6-226ENST00000483656 CDC34P49427 236 aaPredicted RBP7.84□□□□□ -1.15
HDAC6-226ENST00000483656 PLP1P60201 277 aa7.84□□□□□ -1.15
HDAC6-226ENST00000483656 Q56UQ5 140 aa7.84□□□□□ -1.15
HDAC6-226ENST00000483656 LCNL1Q6ZST4 164 aa7.84□□□□□ -1.15
HDAC6-226ENST00000483656 MIR17HGQ75NE6 70 aa7.84□□□□□ -1.15
HDAC6-226ENST00000483656 CITED4Q96RK1 184 aa7.84□□□□□ -1.15
HDAC6-226ENST00000483656 CHRDL1Q9BU40 450 aa7.84□□□□□ -1.15
HDAC6-226ENST00000483656 MAP1LC3BQ9GZQ8 125 aa7.84□□□□□ -1.15
HDAC6-226ENST00000483656 SEPSECSQ9HD40 501 aaKnown RBP7.84□□□□□ -1.15
HDAC6-226ENST00000483656 SERTAD4Q9NUC0 356 aa7.84□□□□□ -1.15
HDAC6-226ENST00000483656 CDC42EP3Q9UKI2 254 aa7.84□□□□□ -1.15
HDAC6-226ENST00000483656 HIVEP2P31629 2446 aa7.84□□□□□ -1.15
HDAC6-226ENST00000483656 TRAV30A0A087WSZ9 112 aa7.83□□□□□ -1.16
HDAC6-226ENST00000483656 FAM181BA6NEQ2 426 aa7.83□□□□□ -1.16
HDAC6-226ENST00000483656 OR2T8A6NH00 312 aa7.83□□□□□ -1.16
HDAC6-226ENST00000483656 FAM223BA6NKX1 122 aa7.83□□□□□ -1.16
HDAC6-226ENST00000483656 NUDT19A8MXV4 375 aa7.83□□□□□ -1.16
HDAC6-226ENST00000483656 INAFM1C9JVW0 142 aa7.83□□□□□ -1.16
HDAC6-226ENST00000483656 GNG7O60262 68 aa7.83□□□□□ -1.16
HDAC6-226ENST00000483656 TOMM40O96008 361 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms