RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 NRG4Q8WWG1 115 aa5.34□□□□□ -1.55
CSDE1-206ENST00000483030 PINX1Q96BK5 328 aaKnown RBP5.34□□□□□ -1.55
CSDE1-206ENST00000483030 GINS3Q9BRX5 216 aa5.34□□□□□ -1.55
CSDE1-206ENST00000483030 RNF126Q9BV68 326 aa5.34□□□□□ -1.55
CSDE1-206ENST00000483030 KRTAP4-5Q9BYR2 181 aa5.34□□□□□ -1.55
CSDE1-206ENST00000483030 VSIRQ9H7M9 311 aa5.34□□□□□ -1.55
CSDE1-206ENST00000483030 SEPSECSQ9HD40 501 aaKnown RBP5.34□□□□□ -1.55
CSDE1-206ENST00000483030 TXNL4BQ9NX01 149 aaKnown RBP5.34□□□□□ -1.55
CSDE1-206ENST00000483030 FKBP11Q9NYL4 201 aa5.34□□□□□ -1.55
CSDE1-206ENST00000483030 RABAC1Q9UI14 185 aa5.34□□□□□ -1.55
CSDE1-206ENST00000483030 DEFB131BA0A096LNP1 70 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 TRAV2A0A0B4J234 112 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 MEIS3P1A6NDR6 274 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 KNCNA6PVL3 124 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 ZNF705EA8MWA4 302 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-206ENST00000483030 LINC00587B1AMM8 73 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 MBP02144 154 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 H2AFB2P0C5Z0 115 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 CLEC2LP0C7M8 214 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 P0DMU3 169 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 FAM231AP0DMU4 169 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 FAM231CP0DMU5 169 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 FGF9P31371 208 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-206ENST00000483030 RFX2P48378 723 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 TAS2R60P59551 318 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 SMCO1Q147U7 214 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 C12orf74Q32Q52 190 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 PXDC1Q5TGL8 231 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 ETFRF1Q6IPR1 90 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 SFXN4Q6P4A7 337 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 MORN3Q6PF18 240 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-206ENST00000483030 DHRS11Q6UWP2 260 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 TRPT1Q86TN4 253 aaKnown RBP5.33□□□□□ -1.56
CSDE1-206ENST00000483030 MITD1Q8WV92 249 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 BORCS5Q969J3 196 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 MOB3AQ96BX8 217 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 SLC25A38Q96DW6 304 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 SCRT1Q9BWW7 348 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 MRPL18Q9H0U6 180 aaKnown RBP5.33□□□□□ -1.56
CSDE1-206ENST00000483030 SAV1Q9H4B6 383 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-206ENST00000483030 AUNIPQ9H7T9 357 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 TMEM14BQ9NUH8 114 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 CLEC5AQ9NY25 188 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 X6R8D5 127 aa5.33□□□□□ -1.56
CSDE1-206ENST00000483030 A0A1B0GU03 582 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 SPP1P10451 314 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 C4BPBP20851 252 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 NPPCP23582 126 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 G0S2P27469 103 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 SDC2P34741 201 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 ALDH3B2P48448 385 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 FLI1Q01543 452 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-206ENST00000483030 MXD1Q05195 221 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 USF2Q15853 346 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-206ENST00000483030 TMEM41BQ5BJD5 291 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 ACTL10Q5JWF8 245 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 IDNKQ5T6J7 187 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 UBE2UQ5VVX9 321 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 CMTM1Q8IZ96 169 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 STXBP6Q8NFX7 210 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 OR4A16Q8NH70 328 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 RNASE11Q8TAA1 199 aaKnown RBP5.32□□□□□ -1.56
CSDE1-206ENST00000483030 CNBD2Q96M20 576 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 C12orf57Q99622 126 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 ZNF2Q9BSG1 426 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-206ENST00000483030 EHFQ9NZC4 300 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 TBC1D24Q9ULP9 559 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 CELA1Q9UNI1 258 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 RNF24Q9Y225 148 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 FAT2Q9NYQ8 4349 aa5.32□□□□□ -1.56
CSDE1-206ENST00000483030 DNAH2Q9P225 4427 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 A0A0A6YYH2 397 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 A0A1W2PS18 150 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 A6NJ64 397 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 K7EQG2 157 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 TMEM50AO95807 157 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 IFNA10P01566 189 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 PMP2P02689 132 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 AMBPP02760 352 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 ZNF688P0C7X2 276 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 S100PP25815 95 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 PSMB9P28065 219 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 NPBWR1P48145 328 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 CEBPGP53567 150 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 HSPE1P61604 102 aaKnown RBP5.31□□□□□ -1.56
CSDE1-206ENST00000483030 ERHP84090 104 aaKnown RBP5.31□□□□□ -1.56
CSDE1-206ENST00000483030 BAK1Q16611 211 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 LGALS9BQ3B8N2 356 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 PHLDA2Q53GA4 152 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 H2BFWTQ7Z2G1 175 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 ZNF575Q86XF7 245 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 ZNF114Q8NC26 417 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 CSNK1G2-AS1Q8NCQ2 148 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 GRAMD2BQ96HH9 432 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 ZNF479Q96JC4 524 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 NDUFAF3Q9BU61 184 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 TMEM231Q9H6L2 316 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 RNF167Q9H6Y7 350 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 IFT46Q9NQC8 304 aa5.31□□□□□ -1.56
CSDE1-206ENST00000483030 SSR3Q9UNL2 185 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms