RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 MRPL27Q9P0M9 148 aaKnown RBP6.64□□□□□ -1.35
SNX4-205ENST00000482965 GSKIPQ9P0R6 139 aa6.64□□□□□ -1.35
SNX4-205ENST00000482965 SELENOKQ9Y6D0 94 aa6.64□□□□□ -1.35
SNX4-205ENST00000482965 C5orf51A6NDU8 294 aa6.63□□□□□ -1.35
SNX4-205ENST00000482965 C15orf62A8K5M9 175 aa6.63□□□□□ -1.35
SNX4-205ENST00000482965 INMT-MINDY4F8WBC2 141 aa6.63□□□□□ -1.35
SNX4-205ENST00000482965 K7EMT4 169 aa6.63□□□□□ -1.35
SNX4-205ENST00000482965 SSSCA1O60232 199 aa6.63□□□□□ -1.35
SNX4-205ENST00000482965 C8orf88P0DMB2 117 aa6.63□□□□□ -1.35
SNX4-205ENST00000482965 POLR2GP62487 172 aaKnown RBP eCLIP6.63□□□□□ -1.35
SNX4-205ENST00000482965 PRKDCP78527 4128 aaKnown RBP6.63□□□□□ -1.35
SNX4-205ENST00000482965 ID3Q02535 119 aa6.63□□□□□ -1.35
SNX4-205ENST00000482965 CD69Q07108 199 aa6.63□□□□□ -1.35
SNX4-205ENST00000482965 GUCA2BQ16661 112 aa6.63□□□□□ -1.35
SNX4-205ENST00000482965 TIGITQ495A1 244 aa6.63□□□□□ -1.35
SNX4-205ENST00000482965 SPANXN5Q5MJ07 72 aa6.63□□□□□ -1.35
SNX4-205ENST00000482965 OR1S2Q8NGQ3 325 aa6.63□□□□□ -1.35
SNX4-205ENST00000482965 NPIPB3Q92617 1050 aa6.63□□□□□ -1.35
SNX4-205ENST00000482965 ACY3Q96HD9 319 aa6.63□□□□□ -1.35
SNX4-205ENST00000482965 SLC35E1Q96K37 410 aa6.63□□□□□ -1.35
SNX4-205ENST00000482965 OR10C1Q96KK4 312 aa6.63□□□□□ -1.35
SNX4-205ENST00000482965 GINS3Q9BRX5 216 aa6.63□□□□□ -1.35
SNX4-205ENST00000482965 MLXQ9UH92 298 aa6.63□□□□□ -1.35
SNX4-205ENST00000482965 LSM4Q9Y4Z0 139 aaKnown RBP6.63□□□□□ -1.35
SNX4-205ENST00000482965 PUS1Q9Y606 427 aaKnown RBP eCLIP6.63□□□□□ -1.35
SNX4-205ENST00000482965 SMAD5-AS1Q9Y6J3 95 aa6.63□□□□□ -1.35
SNX4-205ENST00000482965 IGHV7-4-1A0A0J9YVY3 117 aa6.62□□□□□ -1.35
SNX4-205ENST00000482965 H3BP45 60 aa6.62□□□□□ -1.35
SNX4-205ENST00000482965 PRAF2O60831 178 aa6.62□□□□□ -1.35
SNX4-205ENST00000482965 IGLC1P0CG04 106 aa6.62□□□□□ -1.35
SNX4-205ENST00000482965 OR10J1P30954 320 aa6.62□□□□□ -1.35
SNX4-205ENST00000482965 GPX4P36969 197 aaPredicted RBP6.62□□□□□ -1.35
SNX4-205ENST00000482965 TOMM20LQ6UXN7 152 aa6.62□□□□□ -1.35
SNX4-205ENST00000482965 RBPMS2Q6ZRY4 209 aaKnown RBP6.62□□□□□ -1.35
SNX4-205ENST00000482965 GTSCR1Q86UQ5 136 aa6.62□□□□□ -1.35
SNX4-205ENST00000482965 TMEM61Q8N0U2 210 aa6.62□□□□□ -1.35
SNX4-205ENST00000482965 TMEM116Q8NCL8 245 aa6.62□□□□□ -1.35
SNX4-205ENST00000482965 WDR89Q96FK6 387 aaPredicted RBP6.62□□□□□ -1.35
SNX4-205ENST00000482965 ZNF414Q96IQ9 312 aa6.62□□□□□ -1.35
SNX4-205ENST00000482965 PSENENQ9NZ42 101 aa6.62□□□□□ -1.35
SNX4-205ENST00000482965 STRAPQ9Y3F4 350 aaKnown RBP6.62□□□□□ -1.35
SNX4-205ENST00000482965 IGHV3-49A0A0A0MS15 119 aa6.61□□□□□ -1.35
SNX4-205ENST00000482965 TRAV14DV4A0A0A6YYC5 116 aa6.61□□□□□ -1.35
SNX4-205ENST00000482965 TRAV25A0A0B4J276 109 aa6.61□□□□□ -1.35
SNX4-205ENST00000482965 ZNF785A8K8V0 405 aa6.61□□□□□ -1.35
SNX4-205ENST00000482965 SCAF4O95104 1147 aaKnown RBP6.61□□□□□ -1.35
SNX4-205ENST00000482965 IGKV1-17P01599 117 aa6.61□□□□□ -1.35
SNX4-205ENST00000482965 BMI1P35226 326 aa6.61□□□□□ -1.35
SNX4-205ENST00000482965 CD81P60033 236 aa6.61□□□□□ -1.35
SNX4-205ENST00000482965 LAMTOR1Q6IAA8 161 aa6.61□□□□□ -1.35
SNX4-205ENST00000482965 GSG1LQ6UXU4 331 aa6.61□□□□□ -1.35
SNX4-205ENST00000482965 Q8WTZ3 238 aa6.61□□□□□ -1.35
SNX4-205ENST00000482965 SMIM8Q96KF7 97 aa6.61□□□□□ -1.35
SNX4-205ENST00000482965 C2orf50Q96LR7 162 aa6.61□□□□□ -1.35
SNX4-205ENST00000482965 RAB40CQ96S21 281 aa6.61□□□□□ -1.35
SNX4-205ENST00000482965 MARVELD1Q9BSK0 173 aa6.61□□□□□ -1.35
SNX4-205ENST00000482965 RHPN1-AS1Q9BWJ2 59 aa6.61□□□□□ -1.35
SNX4-205ENST00000482965 SMPXQ9UHP9 88 aa6.61□□□□□ -1.35
SNX4-205ENST00000482965 RCL1Q9Y2P8 373 aaKnown RBP6.61□□□□□ -1.35
SNX4-205ENST00000482965 IGHV3OR16-13A0A075B7E8 117 aa6.6□□□□□ -1.35
SNX4-205ENST00000482965 IGHV3-74A0A0B4J1X5 117 aa6.6□□□□□ -1.35
SNX4-205ENST00000482965 ZFP92A6NM28 416 aa6.6□□□□□ -1.35
SNX4-205ENST00000482965 SNRPGP15A8MWD9 76 aa6.6□□□□□ -1.35
SNX4-205ENST00000482965 L7N2F9 121 aa6.6□□□□□ -1.35
SNX4-205ENST00000482965 CHEK1O14757 476 aa6.6□□□□□ -1.35
SNX4-205ENST00000482965 MBPP02686 304 aaPredicted RBP6.6□□□□□ -1.35
SNX4-205ENST00000482965 NPPCP23582 126 aa6.6□□□□□ -1.35
SNX4-205ENST00000482965 YPEL3P61236 119 aaPredicted RBP6.6□□□□□ -1.35
SNX4-205ENST00000482965 VAMP2P63027 116 aa6.6□□□□□ -1.35
SNX4-205ENST00000482965 GAMTQ14353 236 aa6.6□□□□□ -1.35
SNX4-205ENST00000482965 OR8G2PQ6IF36 304 aa6.6□□□□□ -1.35
SNX4-205ENST00000482965 Q8N1Y9 231 aa6.6□□□□□ -1.35
SNX4-205ENST00000482965 NARS2Q96I59 477 aaKnown RBP6.6□□□□□ -1.35
SNX4-205ENST00000482965 METTL26Q96S19 204 aa6.6□□□□□ -1.35
SNX4-205ENST00000482965 B9D2Q9BPU9 175 aa6.6□□□□□ -1.35
SNX4-205ENST00000482965 NEURL2Q9BR09 285 aa6.6□□□□□ -1.35
SNX4-205ENST00000482965 TMEM231Q9H6L2 316 aa6.6□□□□□ -1.35
SNX4-205ENST00000482965 LSM5Q9Y4Y9 91 aaKnown RBP6.6□□□□□ -1.35
SNX4-205ENST00000482965 A0A1W2PS18 150 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 PRSS46E5RG02 174 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 K7EPK0 472 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 GOSR2O14653 212 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 TSPAN4O14817 238 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 TSC22D2O75157 780 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 TOMM40O96008 361 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 IL4P05112 153 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 FABP1P07148 127 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 CD7P09564 240 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 METTL15P1P0C7V9 234 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 RD3LP0DJH9 198 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 IGHV4-30-4P0DP06 118 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 PAX9P55771 341 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 TAS2R30P59541 319 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 S100A10P60903 97 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 AKR1C1Q04828 323 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 ACOT7LQ6ZUV0 252 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 ST8SIA2Q92186 375 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 RNF2Q99496 336 aa6.59□□□□□ -1.35
SNX4-205ENST00000482965 SPAG8Q99932 426 aaPredicted RBP6.59□□□□□ -1.35
SNX4-205ENST00000482965 TUBA4BQ9H853 241 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms