RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 KRTAP2-1Q9BYU5 128 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 MS4A6AQ9H2W1 248 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 SLC22A13Q9Y226 551 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 IGLV3-32A0A0A0MS00 114 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.38□□□□□ -2.03
SHQ1-208ENST00000482785 GNG14A0A1W2PPG7 69 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 METTL15A6NJ78 407 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 VGLL3A8MV65 326 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 KLLNB2CW77 178 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 C11orf94C9JXX5 98 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 H0YJW9 148 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 COPEO14579 308 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 GYG2O15488 501 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 COX7A2P2O60397 106 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 SCO1O75880 301 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 DCTN3O75935 186 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 CYB5R3P00387 301 aaPredicted RBP2.38□□□□□ -2.03
SHQ1-208ENST00000482785 IL3P08700 152 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 PSG2P11465 335 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 PRPS1L1P21108 318 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 CFL1P23528 166 aaKnown RBP2.38□□□□□ -2.03
SHQ1-208ENST00000482785 PYCR1P32322 319 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 CCR6P51684 374 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 TNFAIP6P98066 277 aaPredicted RBP2.38□□□□□ -2.03
SHQ1-208ENST00000482785 SSX1Q16384 188 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 DEFB135Q30KP9 77 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 AKIRIN2Q53H80 203 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 GLYATQ6IB77 296 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 HCP5Q6MZN7 132 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 NTM-AS1Q6ZSK4 140 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 RPS27LQ71UM5 84 aaKnown RBP2.38□□□□□ -2.03
SHQ1-208ENST00000482785 PRNTQ86SH4 94 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 TMEM256Q8N2U0 113 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 SLC25A29Q8N8R3 303 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 OR5D18Q8NGL1 313 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 OR9A2Q8NGT5 310 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 OR5W2Q8NH69 310 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 HAVCR2Q8TDQ0 301 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 SRSF12Q8WXF0 261 aaKnown RBP2.38□□□□□ -2.03
SHQ1-208ENST00000482785 ASB13Q8WXK3 278 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 PPCDCQ96CD2 204 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 PHYHIPLQ96FC7 376 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 YPEL4Q96NS1 127 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 ZIM3Q96PE6 472 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 SCRT1Q9BWW7 348 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 EBPLQ9BY08 206 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 CHST5Q9GZS9 411 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 MAP1LC3AQ9H492 121 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 RBM12B-AS1Q9P1G2 102 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 LINC00527Q9UJ94 153 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 TIMM22Q9Y584 194 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 DNAJC15Q9Y5T4 150 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 KIF25-AS1Q9Y6Z4 181 aa2.38□□□□□ -2.03
SHQ1-208ENST00000482785 IGHV2-26A0A0B4J1V2 119 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 A0A1W2PQD3 144 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 A0A1W2PQL4 384 aaPredicted RBP2.37□□□□□ -2.03
SHQ1-208ENST00000482785 C9JQL5 133 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 C8orf87E5RJ46 101 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 VAMP5O95183 116 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 HLA-DQA1P01909 254 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 GUSBP08236 651 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 LINC00032P0C843 101 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 SCGB1C2P0DMR2 95 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 PSMA1P25786 263 aaKnown RBP2.37□□□□□ -2.03
SHQ1-208ENST00000482785 ALDH3A1P30838 453 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 GABRA3P34903 492 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 KIR3DL2P43630 455 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 RPS10P46783 165 aaKnown RBP2.37□□□□□ -2.03
SHQ1-208ENST00000482785 IDH2P48735 452 aaKnown RBP2.37□□□□□ -2.03
SHQ1-208ENST00000482785 KRTAP10-6P60371 365 aaPredicted RBP2.37□□□□□ -2.03
SHQ1-208ENST00000482785 EMX2Q04743 252 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 ZNF616Q08AN1 781 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 SMAGPQ0VAQ4 97 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 FOXF1Q12946 379 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 CASP8Q14790 479 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 RNASE13Q5GAN3 156 aaKnown RBP2.37□□□□□ -2.03
SHQ1-208ENST00000482785 TNFAIP8L3Q5GJ75 292 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 TEX30Q5JUR7 227 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 TNFAIP8L2Q6P589 184 aaPredicted RBP2.37□□□□□ -2.03
SHQ1-208ENST00000482785 LINC00612Q8N6U2 182 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 SCGB1C1Q8TD33 95 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 RPS4Y2Q8TD47 263 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 C4orf3Q8WVX3 66 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 CYGBQ8WWM9 190 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 NARS2Q96I59 477 aaKnown RBP2.37□□□□□ -2.03
SHQ1-208ENST00000482785 PPP3R2Q96LZ3 170 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 OR4C12Q96R67 309 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 PRSS27Q9BQR3 290 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 CHCHD7Q9BUK0 85 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 FBXL15Q9H469 300 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 VSIRQ9H7M9 311 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 UBQLN4Q9NRR5 601 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 TMEM14AQ9Y6G1 99 aa2.37□□□□□ -2.03
SHQ1-208ENST00000482785 LOC102724200A0A096LPH7 203 aaPredicted RBP2.36□□□□□ -2.03
SHQ1-208ENST00000482785 TRBV6-6A0A0A6YYG2 114 aa2.36□□□□□ -2.03
SHQ1-208ENST00000482785 SPRR5A0A1B0GTR4 108 aa2.36□□□□□ -2.03
SHQ1-208ENST00000482785 TMEM223A0PJW6 202 aa2.36□□□□□ -2.03
SHQ1-208ENST00000482785 IZUMO1RA6ND01 250 aa2.36□□□□□ -2.03
SHQ1-208ENST00000482785 DEFB4AO15263 64 aa2.36□□□□□ -2.03
SHQ1-208ENST00000482785 ZNF861PO60384 105 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms