RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 FAM120AOSQ5T036 256 aa11.65□□□□□ -0.54
COL9A2-207ENST00000482722 S1PR3Q99500 378 aa11.65□□□□□ -0.54
COL9A2-207ENST00000482722 CSMD1Q96PZ7 3565 aa11.65□□□□□ -0.54
COL9A2-207ENST00000482722 PRR33A8MZF0 331 aa11.65□□□□□ -0.55
COL9A2-207ENST00000482722 TOX4O94842 621 aa11.65□□□□□ -0.55
COL9A2-207ENST00000482722 IGKV3-15P01624 115 aa11.65□□□□□ -0.55
COL9A2-207ENST00000482722 MLANAQ16655 118 aa11.65□□□□□ -0.55
COL9A2-207ENST00000482722 FAM201AQ5SY85 155 aa11.65□□□□□ -0.55
COL9A2-207ENST00000482722 ZC2HC1AQ96GY0 325 aa11.65□□□□□ -0.55
COL9A2-207ENST00000482722 COMMD5Q9GZQ3 224 aa11.65□□□□□ -0.55
COL9A2-207ENST00000482722 GAGE12BA1L429 117 aa11.64□□□□□ -0.55
COL9A2-207ENST00000482722 SPRNQ5BIV9 151 aa11.64□□□□□ -0.55
COL9A2-207ENST00000482722 MBD6Q96DN6 1003 aa11.64□□□□□ -0.55
COL9A2-207ENST00000482722 AKAP6Q13023 2319 aa11.64□□□□□ -0.55
COL9A2-207ENST00000482722 SLC25A34Q6PIV7 304 aa11.64□□□□□ -0.55
COL9A2-207ENST00000482722 RASL11AQ6T310 242 aa11.64□□□□□ -0.55
COL9A2-207ENST00000482722 NUDT11Q96G61 164 aa11.64□□□□□ -0.55
COL9A2-207ENST00000482722 SH3BGRL2Q9UJC5 107 aa11.64□□□□□ -0.55
COL9A2-207ENST00000482722 MAP1AP78559 2803 aaPredicted RBP11.63□□□□□ -0.55
COL9A2-207ENST00000482722 TRAV8-6A0A0B4J262 113 aa11.63□□□□□ -0.55
COL9A2-207ENST00000482722 TMEM238C9JI98 176 aa11.63□□□□□ -0.55
COL9A2-207ENST00000482722 ZNF841Q6ZN19 808 aa11.63□□□□□ -0.55
COL9A2-207ENST00000482722 TRGV8A0A0C4DH27 118 aa11.63□□□□□ -0.55
COL9A2-207ENST00000482722 SNRNP40Q96DI7 357 aaKnown RBP11.63□□□□□ -0.55
COL9A2-207ENST00000482722 IGKV1D-17A0A075B6S4 117 aa11.62□□□□□ -0.55
COL9A2-207ENST00000482722 TRAV17A0A0B4J275 112 aa11.62□□□□□ -0.55
COL9A2-207ENST00000482722 IGHV1-18A0A0C4DH31 117 aa11.62□□□□□ -0.55
COL9A2-207ENST00000482722 K7ERU9 68 aa11.62□□□□□ -0.55
COL9A2-207ENST00000482722 CORTO00230 105 aa11.62□□□□□ -0.55
COL9A2-207ENST00000482722 MEGF9Q9H1U4 602 aa11.62□□□□□ -0.55
COL9A2-207ENST00000482722 ZNF71Q9NQZ8 489 aaPredicted RBP11.62□□□□□ -0.55
COL9A2-207ENST00000482722 IGKV1OR2-108A0A075B7D4 117 aa11.62□□□□□ -0.55
COL9A2-207ENST00000482722 VWC2LB2RUY7 222 aa11.62□□□□□ -0.55
COL9A2-207ENST00000482722 SYS1-DBNDD2H3BUS1 97 aa11.62□□□□□ -0.55
COL9A2-207ENST00000482722 SPRY3O43610 288 aa11.62□□□□□ -0.55
COL9A2-207ENST00000482722 SAP30O75446 220 aa11.62□□□□□ -0.55
COL9A2-207ENST00000482722 OR2J3O76001 311 aa11.62□□□□□ -0.55
COL9A2-207ENST00000482722 ADH4P08319 380 aa11.62□□□□□ -0.55
COL9A2-207ENST00000482722 RIPPLY3P57055 190 aa11.62□□□□□ -0.55
COL9A2-207ENST00000482722 PRR7Q8TB68 274 aa11.62□□□□□ -0.55
COL9A2-207ENST00000482722 OR2V2Q96R30 315 aa11.62□□□□□ -0.55
COL9A2-207ENST00000482722 A0A087X0K7 114 aa11.61□□□□□ -0.55
COL9A2-207ENST00000482722 CD24P25063 80 aa11.61□□□□□ -0.55
COL9A2-207ENST00000482722 TRAT1Q6PIZ9 186 aa11.61□□□□□ -0.55
COL9A2-207ENST00000482722 C12orf54Q6X4T0 127 aa11.61□□□□□ -0.55
COL9A2-207ENST00000482722 MOGAT3Q86VF5 341 aa11.61□□□□□ -0.55
COL9A2-207ENST00000482722 MCRIP2Q9BUT9 160 aaKnown RBP11.61□□□□□ -0.55
COL9A2-207ENST00000482722 DKK4Q9UBT3 224 aa11.61□□□□□ -0.55
COL9A2-207ENST00000482722 A0A1W2PRE2 83 aa11.61□□□□□ -0.55
COL9A2-207ENST00000482722 C15orf61A6NNL5 157 aa11.61□□□□□ -0.55
COL9A2-207ENST00000482722 CRXO43186 299 aaPredicted RBP11.61□□□□□ -0.55
COL9A2-207ENST00000482722 FOXA3P55318 350 aaPredicted RBP11.61□□□□□ -0.55
COL9A2-207ENST00000482722 FOXC1Q12948 553 aa11.61□□□□□ -0.55
COL9A2-207ENST00000482722 MSMPQ1L6U9 139 aa11.61□□□□□ -0.55
COL9A2-207ENST00000482722 DEFB108BQ8NET1 73 aa11.61□□□□□ -0.55
COL9A2-207ENST00000482722 SARAFQ96BY9 339 aa11.61□□□□□ -0.55
COL9A2-207ENST00000482722 GRAMD2BQ96HH9 432 aa11.61□□□□□ -0.55
COL9A2-207ENST00000482722 IFI27L2Q9H2X8 130 aa11.61□□□□□ -0.55
COL9A2-207ENST00000482722 ENY2Q9NPA8 101 aa11.61□□□□□ -0.55
COL9A2-207ENST00000482722 TRAV5A0A0B4J249 113 aa11.61□□□□□ -0.55
COL9A2-207ENST00000482722 IGHV1-24A0A0C4DH33 117 aa11.61□□□□□ -0.55
COL9A2-207ENST00000482722 HIGD1CA8MV81 97 aa11.61□□□□□ -0.55
COL9A2-207ENST00000482722 SEM1Q6ZVN7 128 aa11.61□□□□□ -0.55
COL9A2-207ENST00000482722 M0R1B8 84 aa11.6□□□□□ -0.55
COL9A2-207ENST00000482722 CD5LO43866 347 aa11.6□□□□□ -0.55
COL9A2-207ENST00000482722 MORN5Q5VZ52 161 aa11.6□□□□□ -0.55
COL9A2-207ENST00000482722 FAM71F2Q6NXP2 309 aa11.6□□□□□ -0.55
COL9A2-207ENST00000482722 SGK494Q96LW2 274 aa11.6□□□□□ -0.55
COL9A2-207ENST00000482722 DUX4L9Q6RFH8 374 aaPredicted RBP11.6□□□□□ -0.55
COL9A2-207ENST00000482722 OR9G1Q8NH87 305 aa11.6□□□□□ -0.55
COL9A2-207ENST00000482722 SPOCK3Q9BQ16 436 aa11.6□□□□□ -0.55
COL9A2-207ENST00000482722 SCRT2Q9NQ03 307 aa11.6□□□□□ -0.55
COL9A2-207ENST00000482722 TAS2R45P59539 299 aa11.59□□□□□ -0.55
COL9A2-207ENST00000482722 HSPE1P61604 102 aaKnown RBP11.59□□□□□ -0.55
COL9A2-207ENST00000482722 FOXE3Q13461 319 aa11.59□□□□□ -0.55
COL9A2-207ENST00000482722 C22orf34Q6ZV56 151 aa11.59□□□□□ -0.55
COL9A2-207ENST00000482722 GCSAMQ8N6F7 178 aa11.59□□□□□ -0.55
COL9A2-207ENST00000482722 COL25A1Q9BXS0 654 aaPredicted RBP11.59□□□□□ -0.55
COL9A2-207ENST00000482722 PROCRQ9UNN8 238 aa11.59□□□□□ -0.55
COL9A2-207ENST00000482722 ZNF835Q9Y2P0 537 aa11.59□□□□□ -0.55
COL9A2-207ENST00000482722 MED13LQ71F56 2210 aa11.59□□□□□ -0.55
COL9A2-207ENST00000482722 LEPROTL1O95214 131 aa11.59□□□□□ -0.55
COL9A2-207ENST00000482722 IGHV3-48P01763 117 aa11.59□□□□□ -0.55
COL9A2-207ENST00000482722 IGHG3P01860 377 aa11.59□□□□□ -0.55
COL9A2-207ENST00000482722 LOXL3P58215 753 aa11.59□□□□□ -0.55
COL9A2-207ENST00000482722 FAM231DQ6ZW35 169 aa11.59□□□□□ -0.55
COL9A2-207ENST00000482722 FAM90A1Q86YD7 464 aa11.59□□□□□ -0.55
COL9A2-207ENST00000482722 SMIM12Q96EX1 92 aa11.59□□□□□ -0.55
COL9A2-207ENST00000482722 SLC25A33Q9BSK2 321 aa11.59□□□□□ -0.55
COL9A2-207ENST00000482722 NCOR1P1Q9H4R4 102 aa11.59□□□□□ -0.55
COL9A2-207ENST00000482722 C1RLQ9NZP8 487 aa11.59□□□□□ -0.55
COL9A2-207ENST00000482722 ZNRD1Q9P1U0 126 aa11.59□□□□□ -0.55
COL9A2-207ENST00000482722 SELENOKQ9Y6D0 94 aa11.59□□□□□ -0.55
COL9A2-207ENST00000482722 HSBP1L1C9JCN9 74 aa11.58□□□□□ -0.56
COL9A2-207ENST00000482722 J3QR06 171 aa11.58□□□□□ -0.56
COL9A2-207ENST00000482722 IGLC1P0CG04 106 aa11.58□□□□□ -0.56
COL9A2-207ENST00000482722 C8orf88P0DMB2 117 aa11.58□□□□□ -0.56
COL9A2-207ENST00000482722 TMEM11P17152 192 aa11.58□□□□□ -0.56
COL9A2-207ENST00000482722 UBE2L3P68036 154 aaKnown RBP11.58□□□□□ -0.56
COL9A2-207ENST00000482722 BHLHA15Q7RTS1 189 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms