RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 YPEL1O60688 119 aa8.03□□□□□ -1.12
VEGFA-212ENST00000480614 CHCHD1Q96BP2 118 aaKnown RBP8.03□□□□□ -1.12
VEGFA-212ENST00000480614 YPEL2Q96QA6 119 aa8.03□□□□□ -1.12
VEGFA-212ENST00000480614 AMELYQ99218 206 aa8.03□□□□□ -1.12
VEGFA-212ENST00000480614 IGHV2OR16-5A0A0B4J2B6 119 aa8.02□□□□□ -1.12
VEGFA-212ENST00000480614 ATXN8Q156A1 80 aa8.02□□□□□ -1.12
VEGFA-212ENST00000480614 C1QL4Q86Z23 238 aa8.02□□□□□ -1.12
VEGFA-212ENST00000480614 HTN3P15516 51 aa8.02□□□□□ -1.12
VEGFA-212ENST00000480614 SEC11AP67812 179 aa8.02□□□□□ -1.12
VEGFA-212ENST00000480614 TMEM95Q3KNT9 176 aa8.02□□□□□ -1.12
VEGFA-212ENST00000480614 ZNF585BQ52M93 769 aa8.02□□□□□ -1.12
VEGFA-212ENST00000480614 TMEM144Q7Z5S9 345 aa8.02□□□□□ -1.12
VEGFA-212ENST00000480614 OR13A1Q8NGR1 328 aa8.02□□□□□ -1.12
VEGFA-212ENST00000480614 FBXL15Q9H469 300 aa8.02□□□□□ -1.12
VEGFA-212ENST00000480614 CEACAM1P13688 526 aa8.02□□□□□ -1.13
VEGFA-212ENST00000480614 C7orf69Q9H7B7 122 aa8.02□□□□□ -1.13
VEGFA-212ENST00000480614 SMAD7O15105 426 aaKnown RBP8.02□□□□□ -1.13
VEGFA-212ENST00000480614 KIAA1549LQ6ZVL6 1849 aa8.02□□□□□ -1.13
VEGFA-212ENST00000480614 LILRA1O75019 489 aa8.02□□□□□ -1.13
VEGFA-212ENST00000480614 EIF4EBP2Q13542 120 aaPredicted RBP8.02□□□□□ -1.13
VEGFA-212ENST00000480614 CSRP2Q16527 193 aa8.02□□□□□ -1.13
VEGFA-212ENST00000480614 ZNF362Q5T0B9 420 aaPredicted RBP8.02□□□□□ -1.13
VEGFA-212ENST00000480614 LINC01590Q5TEZ4 76 aa8.02□□□□□ -1.13
VEGFA-212ENST00000480614 MGST2Q99735 147 aa8.02□□□□□ -1.13
VEGFA-212ENST00000480614 WNT10AQ9GZT5 417 aa8.02□□□□□ -1.13
VEGFA-212ENST00000480614 OVOL1O14753 267 aa8.02□□□□□ -1.13
VEGFA-212ENST00000480614 IGFBP2P18065 325 aa8.02□□□□□ -1.13
VEGFA-212ENST00000480614 ZNF257Q9Y2Q1 563 aa8.02□□□□□ -1.13
VEGFA-212ENST00000480614 LGALS1P09382 135 aaKnown RBP8.02□□□□□ -1.13
VEGFA-212ENST00000480614 NCOR2Q9Y618 2525 aa8.02□□□□□ -1.13
VEGFA-212ENST00000480614 PKD1L2Q7Z442 2459 aa8.02□□□□□ -1.13
VEGFA-212ENST00000480614 TRAV9-2A0A087WT02 112 aa8.02□□□□□ -1.13
VEGFA-212ENST00000480614 C17orf100A8MU93 164 aa8.02□□□□□ -1.13
VEGFA-212ENST00000480614 LINC00271P0C7V0 271 aa8.02□□□□□ -1.13
VEGFA-212ENST00000480614 CKS1BP61024 79 aa8.02□□□□□ -1.13
VEGFA-212ENST00000480614 MSGN1A6NI15 193 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 C15orf61A6NNL5 157 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 HOXA3O43365 443 aaPredicted RBP8.01□□□□□ -1.13
VEGFA-212ENST00000480614 HBDP02042 147 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 LINC01560Q8TB33 94 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 CHCHD2Q9Y6H1 151 aaPredicted RBP8.01□□□□□ -1.13
VEGFA-212ENST00000480614 TRGV4A0A0C4DH28 118 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 CGAP01215 116 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 TFF3Q07654 80 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 F8WEM9 126 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 IGHV3-48P01763 117 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 CCL20P78556 96 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 TNFRSF14Q92956 283 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 FDCSPQ8NFU4 85 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 APOMO95445 188 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 ATP5L2Q7Z4Y8 100 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 IGHV3-49A0A0A0MS15 119 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 ALPK3Q96L96 1907 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 LOC101059948A0A1B0GTJ6 334 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 SPAG8Q99932 426 aaPredicted RBP8.01□□□□□ -1.13
VEGFA-212ENST00000480614 CLEC19AQ6UXS0 136 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 RNF125Q96EQ8 232 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 SRSF6Q13247 344 aaKnown RBP8.01□□□□□ -1.13
VEGFA-212ENST00000480614 JMJD1CQ15652 2540 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 TRAV14DV4A0A0A6YYC5 116 aa8.01□□□□□ -1.13
VEGFA-212ENST00000480614 FOXA3P55318 350 aaPredicted RBP8□□□□□ -1.13
VEGFA-212ENST00000480614 COQ2Q96H96 371 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 SPSB2Q99619 263 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 NRN1Q9NPD7 142 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 IGHV3OR16-13A0A075B7E8 117 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 IGHV3-74A0A0B4J1X5 117 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 IGHV3-35A0A0C4DH35 117 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 SCO2A0A1W2PP80 73 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 KLF4O43474 513 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 COLCA1Q6ZS62 124 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 TRAV16A0A0A6YYK6 109 aaPredicted RBP8□□□□□ -1.13
VEGFA-212ENST00000480614 A0A1W2PRE2 83 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 PIN1P1O15428 100 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 OSTCQ9NRP0 149 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 NAV2Q8IVL1 2488 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 PRADC1Q9BSG0 188 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 VKORC1Q9BQB6 163 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 TMEM133Q9H2Q1 129 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 FBLN5Q9UBX5 448 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 CD28P10747 220 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 LAGE3Q14657 143 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 RASL11AQ6T310 242 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 SLC25A48Q6ZT89 311 aaKnown RBP8□□□□□ -1.13
VEGFA-212ENST00000480614 C14orf144Q96I85 54 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 PLEKHB2Q96CS7 222 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 JPT2Q9H910 190 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 M0R2P5 195 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 EGR4Q05215 589 aa8□□□□□ -1.13
VEGFA-212ENST00000480614 SRP19P09132 144 aaKnown RBP7.99□□□□□ -1.13
VEGFA-212ENST00000480614 SPSB3Q6PJ21 355 aa7.99□□□□□ -1.13
VEGFA-212ENST00000480614 UBE2DNLQ8IWF7 75 aa7.99□□□□□ -1.13
VEGFA-212ENST00000480614 ZNF497Q6ZNH5 498 aa7.99□□□□□ -1.13
VEGFA-212ENST00000480614 OR9G4Q8NGQ1 327 aa7.99□□□□□ -1.13
VEGFA-212ENST00000480614 A0A0G2JK05 382 aa7.99□□□□□ -1.13
VEGFA-212ENST00000480614 TGFAP01135 160 aa7.99□□□□□ -1.13
VEGFA-212ENST00000480614 ERVK11-1P61568 191 aa7.99□□□□□ -1.13
VEGFA-212ENST00000480614 SRSF7Q16629 238 aaKnown RBP eCLIP7.99□□□□□ -1.137e-11■□□□□ 9.1
VEGFA-212ENST00000480614 DERL1Q9BUN8 251 aa7.99□□□□□ -1.13
VEGFA-212ENST00000480614 UPK2O00526 184 aa7.99□□□□□ -1.13
VEGFA-212ENST00000480614 IGLV3-19P01714 112 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms