RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.01□□□□□ -1.77
COMMD3-212ENST00000479958 SLC35D1Q9NTN3 355 aa4.01□□□□□ -1.77
COMMD3-212ENST00000479958 PSENENQ9NZ42 101 aa4.01□□□□□ -1.77
COMMD3-212ENST00000479958 UBQLN2Q9UHD9 624 aa4.01□□□□□ -1.77
COMMD3-212ENST00000479958 WNK2Q9Y3S1 2297 aa4.01□□□□□ -1.77
COMMD3-212ENST00000479958 LINC00862A6NCI5 91 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 TOR1AO14656 332 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 PLXNB1O43157 2135 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 RBFOX2O43251 390 aaKnown RBP eCLIP4□□□□□ -1.77
COMMD3-212ENST00000479958 ENSAO43768 121 aaKnown RBP4□□□□□ -1.77
COMMD3-212ENST00000479958 IGLV2-23P01705 113 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 METTL15P1P0C7V9 234 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 PET100P0DJ07 73 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 C4BPBP20851 252 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 CD24P25063 80 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 ATP5J2P56134 94 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 UBE2KP61086 200 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 PJVKQ0ZLH3 352 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 HLA-DRB5Q30154 266 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 CLLU1Q5K131 121 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 SPANXN5Q5MJ07 72 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 GPR157Q5UAW9 335 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 RBPMS2Q6ZRY4 209 aaKnown RBP4□□□□□ -1.77
COMMD3-212ENST00000479958 BAP18Q8IXM2 172 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 TCTEX1D1Q8N7M0 179 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 C8orf31Q8N9H6 132 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 OR4P4Q8NGL7 312 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 OR13D1Q8NGV5 346 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 OR4S2Q8NH73 311 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 STOML3Q8TAV4 291 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 C10orf105Q8TEF2 133 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 TNFRSF14Q92956 283 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 SMIM8Q96KF7 97 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 REG4Q9BYZ8 158 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 SH3BGRL3Q9H299 93 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 ARV1Q9H2C2 271 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 FAM212BQ9NTI7 297 aaPredicted RBP4□□□□□ -1.77
COMMD3-212ENST00000479958 LYRM2Q9NU23 88 aaPredicted RBP4□□□□□ -1.77
COMMD3-212ENST00000479958 PRELID3BQ9Y3B1 194 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 SOX21Q9Y651 276 aaPredicted RBP4□□□□□ -1.77
COMMD3-212ENST00000479958 ABCA12Q86UK0 2595 aa4□□□□□ -1.77
COMMD3-212ENST00000479958 IGHV1-3A0A0C4DH29 117 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 IGHV2-70DA0A0C4DH43 119 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 TEX50A0A1B0GTY4 177 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 A0A1B0GW64 132 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 CEBPZOSA8MTT3 80 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 LEUTXA8MZ59 168 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 E7EUB6 86 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 RNASEK-C17orf49H0YIS7 233 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 BUB1B-PAK6H3BSN5 160 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 H7C2Y5 167 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 UPK2O00526 184 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 ARG1P05089 322 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 SAA1P0DJI8 122 aaPredicted RBP3.99□□□□□ -1.77
COMMD3-212ENST00000479958 NQO2P16083 231 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 PRTN3P24158 256 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 KIR2DS2P43631 304 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 VDAC2P45880 294 aaPredicted RBP3.99□□□□□ -1.77
COMMD3-212ENST00000479958 FHITP49789 147 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 ZNF137PP52743 207 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 RUNX1Q01196 453 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 C10orf55Q5SWW7 151 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 VMO1Q7Z5L0 202 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 MOB3BQ86TA1 216 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 COMMD7Q86VX2 200 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 TGIF2LXQ8IUE1 241 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 PUSL1Q8N0Z8 303 aaKnown RBP3.99□□□□□ -1.77
COMMD3-212ENST00000479958 HSD17B11Q8NBQ5 300 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 CSNK1G2-AS1Q8NCQ2 148 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 OR10W1Q8NGF6 305 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 OR5C1Q8NGR4 320 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 OR4A16Q8NH70 328 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 CD300LFQ8TDQ1 290 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 DTD1Q8TEA8 209 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 LHX4Q969G2 390 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 ADTRPQ96IZ2 230 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 RAB40CQ96S21 281 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 TBX15Q96SF7 602 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 HINT2Q9BX68 163 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 SIRPDQ9H106 197 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 COA4Q9NYJ1 87 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 HILPDAQ9Y5L2 63 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 PTPN13Q12923 2485 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 DOPEY2Q9Y3R5 2298 aa3.99□□□□□ -1.77
COMMD3-212ENST00000479958 VPS13CQ709C8 3753 aa3.98□□□□□ -1.77
COMMD3-212ENST00000479958 ODF3BA8MYP8 253 aa3.98□□□□□ -1.77
COMMD3-212ENST00000479958 M0R1W7 72 aa3.98□□□□□ -1.77
COMMD3-212ENST00000479958 FCN1O00602 326 aa3.98□□□□□ -1.77
COMMD3-212ENST00000479958 TAAR5O14804 337 aa3.98□□□□□ -1.77
COMMD3-212ENST00000479958 FGF16O43320 207 aa3.98□□□□□ -1.77
COMMD3-212ENST00000479958 EIF3GO75821 320 aaKnown RBP eCLIP3.98□□□□□ -1.77
COMMD3-212ENST00000479958 SNAPC5O75971 98 aa3.98□□□□□ -1.77
COMMD3-212ENST00000479958 IFNA17P01571 189 aa3.98□□□□□ -1.77
COMMD3-212ENST00000479958 RBP4P02753 201 aa3.98□□□□□ -1.77
COMMD3-212ENST00000479958 GAPDHP04406 335 aaKnown RBP3.98□□□□□ -1.77
COMMD3-212ENST00000479958 CRYGBP07316 175 aa3.98□□□□□ -1.77
COMMD3-212ENST00000479958 TPT1P13693 172 aaKnown RBP3.98□□□□□ -1.77
COMMD3-212ENST00000479958 PVALBP20472 110 aaPredicted RBP3.98□□□□□ -1.77
COMMD3-212ENST00000479958 SULT1A1P50225 295 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms