RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 MARVELD1Q9BSK0 173 aa11.66□□□□□ -0.54
C9orf3-217ENST00000479161 ZFAND3Q9H8U3 227 aa11.66□□□□□ -0.54
C9orf3-217ENST00000479161 MRPL36Q9P0J6 103 aaKnown RBP11.66□□□□□ -0.54
C9orf3-217ENST00000479161 COL7A1Q02388 2944 aa11.66□□□□□ -0.54
C9orf3-217ENST00000479161 IGHV7-4-1A0A0J9YVY3 117 aa11.65□□□□□ -0.54
C9orf3-217ENST00000479161 IZUMO1RA6ND01 250 aa11.65□□□□□ -0.54
C9orf3-217ENST00000479161 SNRPGP15A8MWD9 76 aa11.65□□□□□ -0.54
C9orf3-217ENST00000479161 TSPAN4O14817 238 aa11.65□□□□□ -0.54
C9orf3-217ENST00000479161 IAH1Q2TAA2 248 aaPredicted RBP11.65□□□□□ -0.54
C9orf3-217ENST00000479161 LAMTOR1Q6IAA8 161 aa11.65□□□□□ -0.54
C9orf3-217ENST00000479161 HAPLN4Q86UW8 402 aa11.65□□□□□ -0.54
C9orf3-217ENST00000479161 TMEM61Q8N0U2 210 aa11.65□□□□□ -0.54
C9orf3-217ENST00000479161 ZBTB8BQ8NAP8 495 aaPredicted RBP11.65□□□□□ -0.54
C9orf3-217ENST00000479161 SPAG8Q99932 426 aaPredicted RBP11.65□□□□□ -0.54
C9orf3-217ENST00000479161 C20orf24Q9BUV8 137 aa11.65□□□□□ -0.54
C9orf3-217ENST00000479161 GPN1Q9HCN4 374 aaPredicted RBP11.65□□□□□ -0.54
C9orf3-217ENST00000479161 PRSS46E5RG02 174 aa11.64□□□□□ -0.55
C9orf3-217ENST00000479161 PTTG1O95997 202 aa11.64□□□□□ -0.55
C9orf3-217ENST00000479161 OR10J1P30954 320 aa11.64□□□□□ -0.55
C9orf3-217ENST00000479161 RND2P52198 227 aa11.64□□□□□ -0.55
C9orf3-217ENST00000479161 SLC16A13Q7RTY0 426 aa11.64□□□□□ -0.55
C9orf3-217ENST00000479161 NRARPQ7Z6K4 114 aa11.64□□□□□ -0.55
C9orf3-217ENST00000479161 FAM110AQ9BQ89 295 aa11.64□□□□□ -0.55
C9orf3-217ENST00000479161 VSIRQ9H7M9 311 aa11.64□□□□□ -0.55
C9orf3-217ENST00000479161 C19orf73Q9NVV2 129 aa11.64□□□□□ -0.55
C9orf3-217ENST00000479161 STRAPQ9Y3F4 350 aaKnown RBP11.64□□□□□ -0.55
C9orf3-217ENST00000479161 PUS1Q9Y606 427 aaKnown RBP eCLIP11.64□□□□□ -0.55
C9orf3-217ENST00000479161 WRBO00258 174 aa11.63□□□□□ -0.55
C9orf3-217ENST00000479161 CHEK1O14757 476 aa11.63□□□□□ -0.55
C9orf3-217ENST00000479161 TSC22D2O75157 780 aa11.63□□□□□ -0.55
C9orf3-217ENST00000479161 YIF1AO95070 293 aa11.63□□□□□ -0.55
C9orf3-217ENST00000479161 SCAF4O95104 1147 aaKnown RBP11.63□□□□□ -0.55
C9orf3-217ENST00000479161 EDN2P20800 178 aa11.63□□□□□ -0.55
C9orf3-217ENST00000479161 CRYBB3P26998 211 aa11.63□□□□□ -0.55
C9orf3-217ENST00000479161 GAMTQ14353 236 aa11.63□□□□□ -0.55
C9orf3-217ENST00000479161 BTNL8Q6UX41 500 aa11.63□□□□□ -0.55
C9orf3-217ENST00000479161 RBPMS2Q6ZRY4 209 aaKnown RBP11.63□□□□□ -0.55
C9orf3-217ENST00000479161 Q8WTZ3 238 aa11.63□□□□□ -0.55
C9orf3-217ENST00000479161 NPIPB3Q92617 1050 aa11.63□□□□□ -0.55
C9orf3-217ENST00000479161 SEC22CQ9BRL7 303 aa11.63□□□□□ -0.55
C9orf3-217ENST00000479161 MAGT1Q9H0U3 335 aa11.63□□□□□ -0.55
C9orf3-217ENST00000479161 A0A1W2PS18 150 aa11.62□□□□□ -0.55
C9orf3-217ENST00000479161 FNDC10F2Z333 226 aa11.62□□□□□ -0.55
C9orf3-217ENST00000479161 INMT-MINDY4F8WBC2 141 aa11.62□□□□□ -0.55
C9orf3-217ENST00000479161 TOMM40O96008 361 aa11.62□□□□□ -0.55
C9orf3-217ENST00000479161 FABP1P07148 127 aa11.62□□□□□ -0.55
C9orf3-217ENST00000479161 IAPPP10997 89 aa11.62□□□□□ -0.55
C9orf3-217ENST00000479161 POLR2GP62487 172 aaKnown RBP eCLIP11.62□□□□□ -0.55
C9orf3-217ENST00000479161 IL15RAQ13261 267 aa11.62□□□□□ -0.55
C9orf3-217ENST00000479161 FAM90A2PQ658T7 463 aa11.62□□□□□ -0.55
C9orf3-217ENST00000479161 C11orf87Q6NUJ2 197 aa11.62□□□□□ -0.55
C9orf3-217ENST00000479161 SLC35E1Q96K37 410 aa11.62□□□□□ -0.55
C9orf3-217ENST00000479161 C2orf50Q96LR7 162 aa11.62□□□□□ -0.55
C9orf3-217ENST00000479161 RHPN1-AS1Q9BWJ2 59 aa11.62□□□□□ -0.55
C9orf3-217ENST00000479161 TMEM231Q9H6L2 316 aa11.62□□□□□ -0.55
C9orf3-217ENST00000479161 CFDP00746 253 aaPredicted RBP11.61□□□□□ -0.55
C9orf3-217ENST00000479161 IGHV4-30-4P0DP06 118 aa11.61□□□□□ -0.55
C9orf3-217ENST00000479161 NPPCP23582 126 aa11.61□□□□□ -0.55
C9orf3-217ENST00000479161 PAX9P55771 341 aa11.61□□□□□ -0.55
C9orf3-217ENST00000479161 TIGITQ495A1 244 aa11.61□□□□□ -0.55
C9orf3-217ENST00000479161 SPANXN5Q5MJ07 72 aa11.61□□□□□ -0.55
C9orf3-217ENST00000479161 TMEM14EPQ6UXP3 125 aa11.61□□□□□ -0.55
C9orf3-217ENST00000479161 THAP8Q8NA92 274 aa11.61□□□□□ -0.55
C9orf3-217ENST00000479161 CHAC2Q8WUX2 184 aa11.61□□□□□ -0.55
C9orf3-217ENST00000479161 WDR89Q96FK6 387 aaPredicted RBP11.61□□□□□ -0.55
C9orf3-217ENST00000479161 METTL26Q96S19 204 aa11.61□□□□□ -0.55
C9orf3-217ENST00000479161 NEURL2Q9BR09 285 aa11.61□□□□□ -0.55
C9orf3-217ENST00000479161 PSENENQ9NZ42 101 aa11.61□□□□□ -0.55
C9orf3-217ENST00000479161 U3KQE9 123 aa11.61□□□□□ -0.55
C9orf3-217ENST00000479161 TRAV2A0A0B4J234 112 aa11.6□□□□□ -0.55
C9orf3-217ENST00000479161 PMS2P5A8MQ11 134 aa11.6□□□□□ -0.55
C9orf3-217ENST00000479161 MBPP02686 304 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-217ENST00000479161 RD3LP0DJH9 198 aa11.6□□□□□ -0.55
C9orf3-217ENST00000479161 CMC4P56277 68 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-217ENST00000479161 GUCA2BQ16661 112 aa11.6□□□□□ -0.55
C9orf3-217ENST00000479161 GSG1LQ6UXU4 331 aa11.6□□□□□ -0.55
C9orf3-217ENST00000479161 ACY3Q96HD9 319 aa11.6□□□□□ -0.55
C9orf3-217ENST00000479161 TRGV9Q99603 122 aa11.6□□□□□ -0.55
C9orf3-217ENST00000479161 GSKIPQ9P0R6 139 aa11.6□□□□□ -0.55
C9orf3-217ENST00000479161 RCL1Q9Y2P8 373 aaKnown RBP11.6□□□□□ -0.55
C9orf3-217ENST00000479161 OR4C46A6NHA9 309 aa11.59□□□□□ -0.55
C9orf3-217ENST00000479161 FRMD6-AS1P0C7T7 363 aa11.59□□□□□ -0.55
C9orf3-217ENST00000479161 CD81P60033 236 aa11.59□□□□□ -0.55
C9orf3-217ENST00000479161 LINC00322Q6ZN03 302 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-217ENST00000479161 OR51G1Q8NGK1 321 aa11.59□□□□□ -0.55
C9orf3-217ENST00000479161 NARS2Q96I59 477 aaKnown RBP11.59□□□□□ -0.55
C9orf3-217ENST00000479161 FAM210AQ96ND0 272 aa11.59□□□□□ -0.55
C9orf3-217ENST00000479161 RNF2Q99496 336 aa11.59□□□□□ -0.55
C9orf3-217ENST00000479161 GGACTQ9BVM4 153 aa11.59□□□□□ -0.55
C9orf3-217ENST00000479161 IGKV1D-37A0A075B6S9 117 aa11.58□□□□□ -0.56
C9orf3-217ENST00000479161 IGHV3OR16-8A0A075B7F1 116 aa11.58□□□□□ -0.56
C9orf3-217ENST00000479161 C7orf66A4D0T2 115 aa11.58□□□□□ -0.56
C9orf3-217ENST00000479161 C5orf51A6NDU8 294 aa11.58□□□□□ -0.56
C9orf3-217ENST00000479161 ZNF207O43670 478 aaKnown RBP11.58□□□□□ -0.56
C9orf3-217ENST00000479161 SSSCA1O60232 199 aa11.58□□□□□ -0.56
C9orf3-217ENST00000479161 PSG1P11464 419 aa11.58□□□□□ -0.56
C9orf3-217ENST00000479161 NUP62P37198 522 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-217ENST00000479161 CYCSP99999 105 aaKnown RBP11.58□□□□□ -0.56
C9orf3-217ENST00000479161 OR8G2PQ6IF36 304 aa11.58□□□□□ -0.56
C9orf3-217ENST00000479161 TMEM144Q7Z5S9 345 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms