RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, human

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-222	ENST00000478095	GP9	P14770	177 aa		7.77	□□□□□ -1.17
HDAC6-222	ENST00000478095	CD69	Q07108	199 aa		7.77	□□□□□ -1.17
HDAC6-222	ENST00000478095	TIGIT	Q495A1	244 aa		7.77	□□□□□ -1.17
HDAC6-222	ENST00000478095	NPIPB3	Q92617	1050 aa		7.77	□□□□□ -1.17
HDAC6-222	ENST00000478095	MARVELD1	Q9BSK0	173 aa		7.77	□□□□□ -1.17
HDAC6-222	ENST00000478095	DAZ1	Q9NQZ3	744 aa	Known RBP	7.77	□□□□□ -1.17
HDAC6-222	ENST00000478095	MLX	Q9UH92	298 aa		7.77	□□□□□ -1.17
HDAC6-222	ENST00000478095	PUS1	Q9Y606	427 aa	Known RBP eCLIP	7.77	□□□□□ -1.17
HDAC6-222	ENST00000478095	IGHV3OR16-13	A0A075B7E8	117 aa		7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	IGHV3-49	A0A0A0MS15	119 aa		7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	IGHV3-74	A0A0B4J1X5	117 aa		7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	GOSR2	O14653	212 aa		7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	PRAF2	O60831	178 aa		7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	SIX6	O95475	246 aa		7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	IGKV1-17	P01599	117 aa		7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	MBP	P02686	304 aa	Predicted RBP	7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	IGLC1	P0CG04	106 aa		7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	OR10J1	P30954	320 aa		7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	RAB11A	P62491	216 aa		7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	RPP30	P78346	268 aa	Known RBP	7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	DEFB114	Q30KQ6	69 aa		7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	ETFRF1	Q6IPR1	90 aa		7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	LCN12	Q6JVE5	192 aa		7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	TOMM20L	Q6UXN7	152 aa		7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	ZNF600	Q6ZNG1	722 aa		7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	WDR89	Q96FK6	387 aa	Predicted RBP	7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	PSENEN	Q9NZ42	101 aa		7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	RCL1	Q9Y2P8	373 aa	Known RBP	7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	STRAP	Q9Y3F4	350 aa	Known RBP	7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	LSM5	Q9Y4Y9	91 aa	Known RBP	7.76	□□□□□ -1.17
HDAC6-222	ENST00000478095	SNRPGP15	A8MWD9	76 aa		7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	SCGB2A1	O75556	95 aa		7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	CCNK	O75909	580 aa		7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	SCAF4	O95104	1147 aa	Known RBP	7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	ELL	P55199	621 aa	Predicted RBP	7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	PAX9	P55771	341 aa		7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	ATP5I	P56385	69 aa	Predicted RBP	7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	S100A10	P60903	97 aa		7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	GAMT	Q14353	236 aa		7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	GUCA2B	Q16661	112 aa		7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	GSG1L	Q6UXU4	331 aa		7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	TMEM61	Q8N0U2	210 aa		7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	TMEM116	Q8NCL8	245 aa		7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	OR1S2	Q8NGQ3	325 aa		7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	MARC2	Q969Z3	335 aa		7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	SLC35E1	Q96K37	410 aa		7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	C2orf50	Q96LR7	162 aa		7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	MRPL18	Q9H0U6	180 aa	Known RBP	7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	TECR	Q9NZ01	308 aa	Known RBP	7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	MRPL27	Q9P0M9	148 aa	Known RBP	7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	DNAH3	Q8TD57	4116 aa		7.75	□□□□□ -1.17
HDAC6-222	ENST00000478095	TRAV30	A0A087WSZ9	112 aa		7.74	□□□□□ -1.17
HDAC6-222	ENST00000478095	TRAV14DV4	A0A0A6YYC5	116 aa		7.74	□□□□□ -1.17
HDAC6-222	ENST00000478095	IGHV3-66	A0A0C4DH42	116 aa		7.74	□□□□□ -1.17
HDAC6-222	ENST00000478095	IGHV7-4-1	A0A0J9YVY3	117 aa		7.74	□□□□□ -1.17
HDAC6-222	ENST00000478095	PRSS46	E5RG02	174 aa		7.74	□□□□□ -1.17
HDAC6-222	ENST00000478095		K7EMT4	169 aa		7.74	□□□□□ -1.17
HDAC6-222	ENST00000478095		K7EPK0	472 aa		7.74	□□□□□ -1.17
HDAC6-222	ENST00000478095	SSNA1	O43805	119 aa		7.74	□□□□□ -1.17
HDAC6-222	ENST00000478095	PTTG1	O95997	202 aa		7.74	□□□□□ -1.17
HDAC6-222	ENST00000478095	C8orf88	P0DMB2	117 aa		7.74	□□□□□ -1.17
HDAC6-222	ENST00000478095	OR8G2P	Q6IF36	304 aa		7.74	□□□□□ -1.17
HDAC6-222	ENST00000478095	ACOT7L	Q6ZUV0	252 aa		7.74	□□□□□ -1.17
HDAC6-222	ENST00000478095	OR2K2	Q8NGT1	345 aa		7.74	□□□□□ -1.17
HDAC6-222	ENST00000478095	SMIM8	Q96KF7	97 aa		7.74	□□□□□ -1.17
HDAC6-222	ENST00000478095	RAB40C	Q96S21	281 aa		7.74	□□□□□ -1.17
HDAC6-222	ENST00000478095	RHPN1-AS1	Q9BWJ2	59 aa		7.74	□□□□□ -1.17
HDAC6-222	ENST00000478095	LSM4	Q9Y4Z0	139 aa	Known RBP	7.74	□□□□□ -1.17
HDAC6-222	ENST00000478095	PRKDC	P78527	4128 aa	Known RBP	7.73	□□□□□ -1.17
HDAC6-222	ENST00000478095	SMCO3	A2RU48	225 aa		7.73	□□□□□ -1.17
HDAC6-222	ENST00000478095	C7orf66	A4D0T2	115 aa		7.73	□□□□□ -1.17
HDAC6-222	ENST00000478095	ZFP92	A6NM28	416 aa		7.73	□□□□□ -1.17
HDAC6-222	ENST00000478095	ZNF785	A8K8V0	405 aa		7.73	□□□□□ -1.17
HDAC6-222	ENST00000478095		L7N2F9	121 aa		7.73	□□□□□ -1.17
HDAC6-222	ENST00000478095	CHEK1	O14757	476 aa		7.73	□□□□□ -1.17
HDAC6-222	ENST00000478095	APOH	P02749	345 aa	Predicted RBP	7.73	□□□□□ -1.17
HDAC6-222	ENST00000478095	METTL15P1	P0C7V9	234 aa		7.73	□□□□□ -1.17
HDAC6-222	ENST00000478095	GPX4	P36969	197 aa	Predicted RBP	7.73	□□□□□ -1.17
HDAC6-222	ENST00000478095	BCAP31	P51572	246 aa		7.73	□□□□□ -1.17
HDAC6-222	ENST00000478095	VAMP2	P63027	116 aa		7.73	□□□□□ -1.17
HDAC6-222	ENST00000478095	RAB32	Q13637	225 aa		7.73	□□□□□ -1.17
HDAC6-222	ENST00000478095	RNF2	Q99496	336 aa		7.73	□□□□□ -1.17
HDAC6-222	ENST00000478095	GINS3	Q9BRX5	216 aa		7.73	□□□□□ -1.17
HDAC6-222	ENST00000478095	SMPX	Q9UHP9	88 aa		7.73	□□□□□ -1.17
HDAC6-222	ENST00000478095	IGKV3-7	A0A075B6H7	116 aa		7.72	□□□□□ -1.17
HDAC6-222	ENST00000478095	IGKV1D-37	A0A075B6S9	117 aa		7.72	□□□□□ -1.17
HDAC6-222	ENST00000478095	TSC22D2	O75157	780 aa		7.72	□□□□□ -1.17
HDAC6-222	ENST00000478095	TOMM40	O96008	361 aa		7.72	□□□□□ -1.17
HDAC6-222	ENST00000478095	IL4	P05112	153 aa		7.72	□□□□□ -1.17
HDAC6-222	ENST00000478095	CD7	P09564	240 aa		7.72	□□□□□ -1.17
HDAC6-222	ENST00000478095	RD3L	P0DJH9	198 aa		7.72	□□□□□ -1.17
HDAC6-222	ENST00000478095	CAV2	P51636	162 aa		7.72	□□□□□ -1.17
HDAC6-222	ENST00000478095	TAS2R30	P59541	319 aa		7.72	□□□□□ -1.17
HDAC6-222	ENST00000478095	CD81	P60033	236 aa		7.72	□□□□□ -1.17
HDAC6-222	ENST00000478095	YPEL3	P61236	119 aa	Predicted RBP	7.72	□□□□□ -1.17
HDAC6-222	ENST00000478095	RRAS2	P62070	204 aa	Predicted RBP	7.72	□□□□□ -1.17
HDAC6-222	ENST00000478095	ZNF90	Q03938	601 aa		7.72	□□□□□ -1.17
HDAC6-222	ENST00000478095	AKR1C1	Q04828	323 aa		7.72	□□□□□ -1.17
HDAC6-222	ENST00000478095	IL15RA	Q13261	267 aa		7.72	□□□□□ -1.17
HDAC6-222	ENST00000478095	DCTN2	Q13561	401 aa	Known RBP	7.72	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms