RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 HSD17B12Q53GQ0 312 aa4.98□□□□□ -1.61
SPTLC1-205ENST00000477888 LCE2AQ5TA79 106 aaPredicted RBP4.98□□□□□ -1.61
SPTLC1-205ENST00000477888 CNIH2Q6PI25 160 aa4.98□□□□□ -1.61
SPTLC1-205ENST00000477888 RXFP4Q8TDU9 374 aa4.98□□□□□ -1.61
SPTLC1-205ENST00000477888 PINX1Q96BK5 328 aaKnown RBP4.98□□□□□ -1.61
SPTLC1-205ENST00000477888 SAV1Q9H4B6 383 aaPredicted RBP4.98□□□□□ -1.61
SPTLC1-205ENST00000477888 NRN1Q9NPD7 142 aa4.98□□□□□ -1.61
SPTLC1-205ENST00000477888 COMMD9Q9P000 198 aa4.98□□□□□ -1.61
SPTLC1-205ENST00000477888 AK6Q9Y3D8 172 aaKnown RBP4.98□□□□□ -1.61
SPTLC1-205ENST00000477888 DNAH8Q96JB1 4490 aa4.97□□□□□ -1.61
SPTLC1-205ENST00000477888 TRAV26-1A0A087WT03 109 aa4.97□□□□□ -1.61
SPTLC1-205ENST00000477888 ZNF705GA8MUZ8 300 aaPredicted RBP4.97□□□□□ -1.61
SPTLC1-205ENST00000477888 B5MCH6 92 aa4.97□□□□□ -1.61
SPTLC1-205ENST00000477888 ATP8B1O43520 1251 aa4.97□□□□□ -1.61
SPTLC1-205ENST00000477888 TSPOP30536 169 aa4.97□□□□□ -1.61
SPTLC1-205ENST00000477888 PSG9Q00887 426 aa4.97□□□□□ -1.61
SPTLC1-205ENST00000477888 ST3GAL4Q11206 333 aa4.97□□□□□ -1.61
SPTLC1-205ENST00000477888 CATR1Q13166 79 aa4.97□□□□□ -1.61
SPTLC1-205ENST00000477888 FOXI2Q6ZQN5 318 aa4.97□□□□□ -1.61
SPTLC1-205ENST00000477888 OR4B1Q8NGF8 309 aa4.97□□□□□ -1.61
SPTLC1-205ENST00000477888 GNPNAT1Q96EK6 184 aaPredicted RBP4.97□□□□□ -1.61
SPTLC1-205ENST00000477888 NARS2Q96I59 477 aaKnown RBP4.97□□□□□ -1.61
SPTLC1-205ENST00000477888 MED4Q9NPJ6 270 aa4.97□□□□□ -1.61
SPTLC1-205ENST00000477888 MRPL36Q9P0J6 103 aaKnown RBP4.97□□□□□ -1.61
SPTLC1-205ENST00000477888 PRNDQ9UKY0 176 aa4.97□□□□□ -1.61
SPTLC1-205ENST00000477888 ERICH4A6NGS2 130 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 EBAG9O00559 213 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 SNAPC5O75971 98 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 KRASP01116 189 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 IGKV1-17P01599 117 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 C1QBP02746 253 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 AZU1P20160 251 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 GADD45AP24522 165 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 ASIPP42127 132 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 WNT4P56705 351 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 ERVK-16P61578 105 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 NFE4Q86UQ8 179 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 NANOGP1Q8N7R0 232 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 OR4C16Q8NGL9 310 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 OR13F1Q8NGS4 319 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 OR51H1Q8NH63 302 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 SECTM1Q8WVN6 248 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 FCGR1BQ92637 280 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 TMEM230Q96A57 120 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 PPP1R14DQ9NXH3 145 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 FKBP11Q9NYL4 201 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 ANXA10Q9UJ72 324 aa4.96□□□□□ -1.62
SPTLC1-205ENST00000477888 IGLV5-52A0A0A0MRZ9 124 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 A0A0J9YY99 117 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 H3BNG1 76 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 SIVA1O15304 175 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 BUB3O43684 328 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 CLN5O75503 358 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 HNRNPCP07910 306 aaKnown RBP eCLIP4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 M6PRP20645 277 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 FCGR2CP31995 323 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 G6PCP35575 357 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 RASSF2P50749 326 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 PAX9P55771 341 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 OR5I1Q13606 314 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 MLANAQ16655 118 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 FAM78BQ5VT40 261 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 HACD4Q5VWC8 232 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 SPATA31B1PQ5VZV4 182 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 TMEM91Q6ZNR0 172 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 ZNF818PQ6ZRF7 136 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 Q6ZSA8 131 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 TPRA1Q86W33 373 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 NUDT10Q8NFP7 164 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 FCAMRQ8WWV6 532 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 NUDT11Q96G61 164 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 IGF2BP2-AS1Q96M15 143 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 TMEM208Q9BTX3 173 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 SCPEP1Q9HB40 452 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 PKHD1L1Q86WI1 4243 aa4.95□□□□□ -1.62
SPTLC1-205ENST00000477888 A8MTW9 85 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 F6UB75 175 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 ZNF701M0R085 212 aaPredicted RBP4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 CRXO43186 299 aaPredicted RBP4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 PPYP01298 95 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 MT1HL1P0DM35 61 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 HOXA5P20719 270 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 F2RP25116 425 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 LPAR6P43657 344 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 RORCP51449 518 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 GNGT1P63211 74 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 SRSF3P84103 164 aaKnown RBP4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 PRCDQ00LT1 54 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 CDNFQ49AH0 187 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 AADACL3Q5VUY0 350 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 C1orf146Q5VVC0 180 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 AMTNQ6UX39 209 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 SIGLEC15Q6ZMC9 328 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 OR4X1Q8NH49 305 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 LGALS14Q8TCE9 139 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 NTN5Q8WTR8 489 aaPredicted RBP4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 LINC00052Q96N35 136 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 ABHD1Q96SE0 405 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 SLC5A7Q9GZV3 580 aa4.94□□□□□ -1.62
SPTLC1-205ENST00000477888 V9GY05 133 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms