RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 BTF3L4Q96K17 158 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 OR4F4Q96R69 305 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 TXN2Q99757 166 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 SMIM7Q9BQ49 75 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 SLC25A33Q9BSK2 321 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 KRTAP4-9Q9BYQ8 210 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 WNT10AQ9GZT5 417 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 SDF2L1Q9HCN8 221 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 LY96Q9Y6Y9 160 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 SPTBN1Q01082 2364 aaKnown RBP6.31□□□□□ -1.4
VMA21-203ENST00000477649 DOPEY1Q5JWR5 2465 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 IGKV1D-37A0A075B6S9 117 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 A0A1W2PRD5 423 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 A0A1W2PRF3 423 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 A0A1W2PRM7 423 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 PSMB11A5LHX3 300 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 I3L2K1 104 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 M0QZK8 103 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 FCN1O00602 326 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 PPP1R2P9O14990 202 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 HYPMO75409 117 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 FOLR2P14207 255 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 CD99P14209 185 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 FCGR2BP31994 310 aaPredicted RBP6.3□□□□□ -1.4
VMA21-203ENST00000477649 CEBPGP53567 150 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 SSBP2P81877 361 aaPredicted RBP6.3□□□□□ -1.4
VMA21-203ENST00000477649 CLEC12BQ2HXU8 276 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 CST9LP1Q5W188 147 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 PRSS57Q6UWY2 283 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 Q8N9W7 124 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 C11orf52Q96A22 123 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 ANAPC16Q96DE5 110 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 PARLQ9H300 379 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 SEPSECSQ9HD40 501 aaKnown RBP6.3□□□□□ -1.4
VMA21-203ENST00000477649 PITPNC1Q9UKF7 332 aa6.3□□□□□ -1.4
VMA21-203ENST00000477649 IGHV4-30-2A0A087WSY4 118 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 CLDN34H7C241 214 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 OR2C1O95371 312 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 BRI3O95415 125 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 REG1AP05451 166 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 RNF224P0DH78 156 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 MFAP2P55001 183 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 MFAP4P55083 255 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 YPEL3P61236 119 aaPredicted RBP6.29□□□□□ -1.4
VMA21-203ENST00000477649 FLI1Q01543 452 aaPredicted RBP6.29□□□□□ -1.4
VMA21-203ENST00000477649 LOXL1Q08397 574 aaPredicted RBP6.29□□□□□ -1.4
VMA21-203ENST00000477649 MLANAQ16655 118 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 GCSAMLQ5JQS6 135 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 TET2Q6N021 2002 aaPredicted RBP6.29□□□□□ -1.4
VMA21-203ENST00000477649 TMEM88Q6PEY1 159 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 MIR17HGQ75NE6 70 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 CBLN2Q8IUK8 224 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 TEX29Q8N6K0 151 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 LINC01356Q8N9X3 169 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 OR51G1Q8NGK1 321 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 SGMS2Q8NHU3 365 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 VN1R17PQ8TDU5 208 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 MBD6Q96DN6 1003 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 AJUBAQ96IF1 538 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 RBM14Q96PK6 669 aaKnown RBP6.29□□□□□ -1.4
VMA21-203ENST00000477649 TMPRSS5Q9H3S3 457 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 TMA7Q9Y2S6 64 aaKnown RBP6.29□□□□□ -1.4
VMA21-203ENST00000477649 MOB4Q9Y3A3 225 aa6.29□□□□□ -1.4
VMA21-203ENST00000477649 IGLV11-55A0A075B6I3 123 aa6.28□□□□□ -1.4
VMA21-203ENST00000477649 IGHV7-81A0A0B4J1V7 117 aa6.28□□□□□ -1.4
VMA21-203ENST00000477649 COLCA2A8K830 154 aa6.28□□□□□ -1.4
VMA21-203ENST00000477649 C9JCJ5 164 aa6.28□□□□□ -1.4
VMA21-203ENST00000477649 K7EIM0 57 aa6.28□□□□□ -1.4
VMA21-203ENST00000477649 OR7C2O60412 319 aa6.28□□□□□ -1.4
VMA21-203ENST00000477649 TOMM40O96008 361 aa6.28□□□□□ -1.4
VMA21-203ENST00000477649 S100A9P06702 114 aaKnown RBP6.28□□□□□ -1.4
VMA21-203ENST00000477649 IGLC1P0CG04 106 aa6.28□□□□□ -1.4
VMA21-203ENST00000477649 RD3LP0DJH9 198 aa6.28□□□□□ -1.4
VMA21-203ENST00000477649 PLA2G2AP14555 144 aa6.28□□□□□ -1.4
VMA21-203ENST00000477649 CRIP2P52943 208 aaPredicted RBP6.28□□□□□ -1.4
VMA21-203ENST00000477649 PRB3Q04118 309 aaPredicted RBP6.28□□□□□ -1.4
VMA21-203ENST00000477649 SRSF1Q07955 248 aaKnown RBP eCLIP6.28□□□□□ -1.4
VMA21-203ENST00000477649 AKIRIN2Q53H80 203 aa6.28□□□□□ -1.4
VMA21-203ENST00000477649 DYNAPQ8N1N2 210 aa6.28□□□□□ -1.4
VMA21-203ENST00000477649 FAM110DQ8TAY7 271 aaPredicted RBP6.28□□□□□ -1.4
VMA21-203ENST00000477649 TMEM37Q8WXS4 190 aa6.28□□□□□ -1.4
VMA21-203ENST00000477649 IMMP2LQ96T52 175 aa6.28□□□□□ -1.4
VMA21-203ENST00000477649 KRTAP4-2Q9BYR5 136 aa6.28□□□□□ -1.4
VMA21-203ENST00000477649 OR51M1Q9H341 326 aa6.28□□□□□ -1.4
VMA21-203ENST00000477649 C7orf69Q9H7B7 122 aa6.28□□□□□ -1.4
VMA21-203ENST00000477649 TMEM14CQ9P0S9 112 aa6.28□□□□□ -1.4
VMA21-203ENST00000477649 ZNF580Q9UK33 172 aa6.28□□□□□ -1.4
VMA21-203ENST00000477649 H3BUA1 57 aa6.27□□□□□ -1.41
VMA21-203ENST00000477649 NUPL2O15504 423 aaKnown RBP6.27□□□□□ -1.41
VMA21-203ENST00000477649 ATF4P18848 351 aaPredicted RBP6.27□□□□□ -1.41
VMA21-203ENST00000477649 S100PP25815 95 aa6.27□□□□□ -1.41
VMA21-203ENST00000477649 RAB9AP51151 201 aa6.27□□□□□ -1.41
VMA21-203ENST00000477649 RAB5BP61020 215 aa6.27□□□□□ -1.41
VMA21-203ENST00000477649 UBE2L3P68036 154 aaKnown RBP6.27□□□□□ -1.41
VMA21-203ENST00000477649 ZNF90Q03938 601 aa6.27□□□□□ -1.41
VMA21-203ENST00000477649 SPATA31B1PQ5VZV4 182 aa6.27□□□□□ -1.41
VMA21-203ENST00000477649 LINC00305Q7Z4B0 112 aa6.27□□□□□ -1.41
VMA21-203ENST00000477649 C5orf56Q8N8D9 126 aa6.27□□□□□ -1.41
VMA21-203ENST00000477649 OR5AU1Q8NGC0 362 aa6.27□□□□□ -1.41
VMA21-203ENST00000477649 Q8WTZ3 238 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms