RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 MRPS10P82664 201 aaKnown RBP1.08□□□□□ -2.24
VPS50-213ENST00000477572 CAV1Q03135 178 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 SLC38A11Q08AI6 406 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 C1DQ13901 141 aaKnown RBP1.08□□□□□ -2.24
VPS50-213ENST00000477572 JOSD1Q15040 202 aaPredicted RBP1.08□□□□□ -2.24
VPS50-213ENST00000477572 RHEBQ15382 184 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 MMDQ15546 238 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 IAH1Q2TAA2 248 aaPredicted RBP1.08□□□□□ -2.24
VPS50-213ENST00000477572 MORN2Q502X0 79 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 PABPC1L2AQ5JQF8 200 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 GLYATL3Q5SZD4 288 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 Q6ZSA8 131 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 OOSP2Q86WS3 158 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 C8orf59Q8N0T1 100 aaPredicted RBP1.08□□□□□ -2.24
VPS50-213ENST00000477572 OR8I2Q8N0Y5 310 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 TMEM86AQ8N2M4 240 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 C12orf45Q8N5I9 185 aaPredicted RBP1.08□□□□□ -2.24
VPS50-213ENST00000477572 DEFB125Q8N687 156 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 KRTCAP2Q8N6L1 136 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 ACBD7Q8N6N7 88 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 ZIC4Q8N9L1 334 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 OR11H6Q8NGC7 330 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 ZNF675Q8TD23 568 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 ZNF418Q8TF45 676 aaPredicted RBP1.08□□□□□ -2.24
VPS50-213ENST00000477572 MBD3L1Q8WWY6 194 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 SLC7A6Q92536 515 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 BORCS7Q96B45 105 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 ROPN1LQ96C74 230 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 ISOC1Q96CN7 298 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 ZC2HC1AQ96GY0 325 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 ACY3Q96HD9 319 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 LYSMD1Q96S90 227 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 NAA38Q9BRA0 125 aaKnown RBP1.08□□□□□ -2.24
VPS50-213ENST00000477572 LXNQ9BS40 222 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 PBDC1Q9BVG4 233 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 NKX6-2Q9C056 277 aaPredicted RBP1.08□□□□□ -2.24
VPS50-213ENST00000477572 OR2H1Q9GZK4 316 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 OR2J1Q9GZK6 312 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 GPR84Q9NQS5 396 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 UBQLN4Q9NRR5 601 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 SCN3BQ9NY72 215 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 MED11Q9P086 117 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 METTL1Q9UBP6 276 aaKnown RBP1.08□□□□□ -2.24
VPS50-213ENST00000477572 RSL24D1Q9UHA3 163 aaKnown RBP1.08□□□□□ -2.24
VPS50-213ENST00000477572 NAT8BQ9UHF3 227 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 HIGD1AQ9Y241 93 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 CCL26Q9Y258 94 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 HS3ST2Q9Y278 367 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 ABCA3Q99758 1704 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 ARHGEF11O15085 1522 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 KDM5DQ9BY66 1539 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 CASZ1Q86V15 1759 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 KIF13AQ9H1H9 1805 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 ANKRD36BQ8N2N9 1353 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 TMEM2Q9UHN6 1383 aa1.08□□□□□ -2.24
VPS50-213ENST00000477572 SMARCA4P51532 1647 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 RALGAPA2Q2PPJ7 1873 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 ANKRD31Q8N7Z5 1873 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 TECPR2O15040 1411 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 FN1P02751 2386 aaKnown RBP1.07□□□□□ -2.24
VPS50-213ENST00000477572 DENND4CQ5VZ89 1909 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 ALPK3Q96L96 1907 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 ANAPC1Q9H1A4 1944 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 MYH4Q9Y623 1939 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 BCL9LQ86UU0 1499 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 EML6Q6ZMW3 1958 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 ZFYVE16Q7Z3T8 1539 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 TRAV30A0A087WSZ9 112 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 TMED7-TICAM2A0A0A6YYA0 188 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 TRAV8-2A0A0B4J237 113 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 TRAV26-2A0A0B4J265 109 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 TEX50A0A1B0GTY4 177 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 SMIM31A0A1B0GVY4 71 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 TMEM218A2RU14 115 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 FAM183AA6NL82 134 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 SIGLEC16A6NMB1 481 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 CLDN25C9JDP6 229 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 H7BYZ3 331 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 M0R2Z0 102 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 COPEO14579 308 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 MRPS14O60783 128 aaKnown RBP1.07□□□□□ -2.24
VPS50-213ENST00000477572 MPC2O95563 127 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 OR2H2O95918 312 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 HBZP02008 142 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 APOA2P02652 100 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 SERPINE1P05121 402 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 DBIP07108 87 aaKnown RBP1.07□□□□□ -2.24
VPS50-213ENST00000477572 LGALS1P09382 135 aaKnown RBP1.07□□□□□ -2.24
VPS50-213ENST00000477572 OR4A8P0C604 315 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 LINC00694P0DN24 101 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 EVI2AP22794 236 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 AGTR1P30556 359 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 BRS3P32247 399 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 GABRA3P34903 492 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 ATP5G3P48201 142 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 RAB5CP51148 216 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 SNRPD2P62316 118 aaKnown RBP1.07□□□□□ -2.24
VPS50-213ENST00000477572 RPS24P62847 133 aaKnown RBP1.07□□□□□ -2.24
VPS50-213ENST00000477572 HLA-DRB3P79483 266 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 CDK6Q00534 326 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms