RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 LINC00479Q96M42 142 aa9.04□□□□□ -0.96
COL27A1-204ENST00000477421 DKK4Q9UBT3 224 aa9.04□□□□□ -0.96
COL27A1-204ENST00000477421 OR2J3O76001 311 aa9.03□□□□□ -0.96
COL27A1-204ENST00000477421 STAG3L2P0CL84 134 aa9.03□□□□□ -0.96
COL27A1-204ENST00000477421 STAG3L3P0CL85 134 aa9.03□□□□□ -0.96
COL27A1-204ENST00000477421 BPIFA4PQ86YQ2 179 aa9.03□□□□□ -0.96
COL27A1-204ENST00000477421 TMEM133Q9H2Q1 129 aa9.03□□□□□ -0.96
COL27A1-204ENST00000477421 A8MWL6 223 aa9.03□□□□□ -0.96
COL27A1-204ENST00000477421 TMEM178BH3BS89 294 aa9.03□□□□□ -0.96
COL27A1-204ENST00000477421 ASPHD1Q5U4P2 390 aa9.03□□□□□ -0.96
COL27A1-204ENST00000477421 ZNF207O43670 478 aaKnown RBP9.03□□□□□ -0.96
COL27A1-204ENST00000477421 TEX38Q6PEX7 206 aa9.03□□□□□ -0.96
COL27A1-204ENST00000477421 UNQ5815/PRO19632Q6UWF5 114 aa9.03□□□□□ -0.96
COL27A1-204ENST00000477421 OR52E5Q8NH55 327 aa9.03□□□□□ -0.96
COL27A1-204ENST00000477421 SRSF12Q8WXF0 261 aaKnown RBP9.03□□□□□ -0.96
COL27A1-204ENST00000477421 HIST1H2BLQ99880 126 aa9.03□□□□□ -0.96
COL27A1-204ENST00000477421 SSBP4Q9BWG4 385 aaPredicted RBP9.03□□□□□ -0.96
COL27A1-204ENST00000477421 C1RLQ9NZP8 487 aa9.03□□□□□ -0.96
COL27A1-204ENST00000477421 DPM3Q9P2X0 92 aa9.03□□□□□ -0.96
COL27A1-204ENST00000477421 A0A1B0GUS0 222 aa9.02□□□□□ -0.97
COL27A1-204ENST00000477421 AMY1AP04745 511 aa9.02□□□□□ -0.97
COL27A1-204ENST00000477421 TBR1Q16650 682 aa9.02□□□□□ -0.97
COL27A1-204ENST00000477421 KRTAP27-1Q3LI81 207 aa9.02□□□□□ -0.97
COL27A1-204ENST00000477421 PPP1R27Q86WC6 154 aa9.02□□□□□ -0.97
COL27A1-204ENST00000477421 WNT10AQ9GZT5 417 aa9.02□□□□□ -0.97
COL27A1-204ENST00000477421 YTHDF2Q9Y5A9 579 aaKnown RBP9.02□□□□□ -0.97
COL27A1-204ENST00000477421 WNT2P09544 360 aa9.02□□□□□ -0.97
COL27A1-204ENST00000477421 UCNP55089 124 aa9.02□□□□□ -0.97
COL27A1-204ENST00000477421 DIAPH2-AS1Q14236 149 aa9.02□□□□□ -0.97
COL27A1-204ENST00000477421 GBGT1Q8N5D6 347 aa9.02□□□□□ -0.97
COL27A1-204ENST00000477421 KLHDC1Q8N7A1 406 aa9.02□□□□□ -0.97
COL27A1-204ENST00000477421 UFC1Q9Y3C8 167 aa9.02□□□□□ -0.97
COL27A1-204ENST00000477421 NAV2Q8IVL1 2488 aa9.02□□□□□ -0.97
COL27A1-204ENST00000477421 TIMM23O14925 209 aa9.02□□□□□ -0.97
COL27A1-204ENST00000477421 OR5AL1P0C617 328 aa9.02□□□□□ -0.97
COL27A1-204ENST00000477421 FCER1GP30273 86 aa9.02□□□□□ -0.97
COL27A1-204ENST00000477421 C19orf35Q6ZS72 473 aa9.02□□□□□ -0.97
COL27A1-204ENST00000477421 IL36BQ9NZH7 164 aa9.02□□□□□ -0.97
COL27A1-204ENST00000477421 TRBV24-1A0A075B6N3 115 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 C15orf65H3BRN8 121 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 ISLRO14498 428 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 LY6EQ16553 131 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 CCDC144NLQ6NUI1 221 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 DMRT1Q9Y5R6 373 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 NUP210LQ5VU65 1888 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 A0A1B0GW64 132 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 M0R143 59 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 CORTO00230 105 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 SERF1AO75920 110 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 FOLR2P14207 255 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 KLRD1Q13241 179 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 C10orf91Q5T1B1 145 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 HIST3H2BBQ8N257 126 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 TMEM256Q8N2U0 113 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 PEX7O00628 323 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 IGLV1-44P01699 117 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 AREGP15514 252 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 COL8A2P25067 703 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 ADMP35318 185 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 NHLH1Q02575 133 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 KLRB1Q12918 225 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 MSMPQ1L6U9 139 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 ZNF672Q499Z4 452 aaPredicted RBP9.01□□□□□ -0.97
COL27A1-204ENST00000477421 PIP4P1Q86T03 277 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 WFDC3Q8IUB2 231 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 CACNG8Q8WXS5 425 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 NAV3Q8IVL0 2385 aa9.01□□□□□ -0.97
COL27A1-204ENST00000477421 HLA-DQA1P01909 254 aa9□□□□□ -0.97
COL27A1-204ENST00000477421 GPX4P36969 197 aaPredicted RBP9□□□□□ -0.97
COL27A1-204ENST00000477421 TCF24Q7RTU0 167 aa9□□□□□ -0.97
COL27A1-204ENST00000477421 A0A1B0GV90 55 aa9□□□□□ -0.97
COL27A1-204ENST00000477421 E7EQL1 145 aa9□□□□□ -0.97
COL27A1-204ENST00000477421 IGHV1-8P0DP01 117 aa9□□□□□ -0.97
COL27A1-204ENST00000477421 VAMP3Q15836 100 aa9□□□□□ -0.97
COL27A1-204ENST00000477421 C17orf58Q2M2W7 97 aa9□□□□□ -0.97
COL27A1-204ENST00000477421 SSX8Q7RTT4 187 aa9□□□□□ -0.97
COL27A1-204ENST00000477421 ZCCHC14Q8WYQ9 949 aaKnown RBP9□□□□□ -0.97
COL27A1-204ENST00000477421 ASCL2Q99929 193 aa9□□□□□ -0.97
COL27A1-204ENST00000477421 LRP4O75096 1905 aa9□□□□□ -0.97
COL27A1-204ENST00000477421 OR8A1Q8NGG7 326 aa9□□□□□ -0.97
COL27A1-204ENST00000477421 IGFBPL1Q8WX77 278 aa9□□□□□ -0.97
COL27A1-204ENST00000477421 SRRM4A7MD48 611 aaKnown RBP8.99□□□□□ -0.97
COL27A1-204ENST00000477421 H0YJW9 148 aa8.99□□□□□ -0.97
COL27A1-204ENST00000477421 AMBPP02760 352 aa8.99□□□□□ -0.97
COL27A1-204ENST00000477421 MT-ND6P03923 174 aa8.99□□□□□ -0.97
COL27A1-204ENST00000477421 MAS1LP35410 378 aa8.99□□□□□ -0.97
COL27A1-204ENST00000477421 COTL1Q14019 142 aa8.99□□□□□ -0.97
COL27A1-204ENST00000477421 SLC25A48Q6ZT89 311 aaKnown RBP8.99□□□□□ -0.97
COL27A1-204ENST00000477421 C19orf24Q9BVV8 132 aa8.99□□□□□ -0.97
COL27A1-204ENST00000477421 LINC00527Q9UJ94 153 aa8.99□□□□□ -0.97
COL27A1-204ENST00000477421 SELENOKQ9Y6D0 94 aa8.99□□□□□ -0.97
COL27A1-204ENST00000477421 GCGP01275 180 aa8.99□□□□□ -0.97
COL27A1-204ENST00000477421 TMEM30BQ3MIR4 351 aa8.99□□□□□ -0.97
COL27A1-204ENST00000477421 ZNF114Q8NC26 417 aa8.99□□□□□ -0.97
COL27A1-204ENST00000477421 MRPL32Q9BYC8 188 aaKnown RBP8.99□□□□□ -0.97
COL27A1-204ENST00000477421 IGHV2-26A0A0B4J1V2 119 aa8.99□□□□□ -0.97
COL27A1-204ENST00000477421 HIGD1CA8MV81 97 aa8.99□□□□□ -0.97
COL27A1-204ENST00000477421 HTN1P15515 57 aa8.99□□□□□ -0.97
COL27A1-204ENST00000477421 MFAP4P55083 255 aa8.99□□□□□ -0.97
COL27A1-204ENST00000477421 TMEM170AQ8WVE7 144 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms