RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ORM1P02763 201 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 RPLP1P05386 114 aaKnown RBP4.1□□□□□ -1.75
CCDC39-204ENST00000476379 CT45A6P0DMU7 189 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 CT45A5P0DMU8 189 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 CT45A7P0DMV0 189 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 FCGR2BP31994 310 aaPredicted RBP4.1□□□□□ -1.75
CCDC39-204ENST00000476379 DUTP33316 252 aaKnown RBP4.1□□□□□ -1.75
CCDC39-204ENST00000476379 CT45A1Q5HYN5 189 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 KHDC1LQ5JSQ8 128 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 MORN5Q5VZ52 161 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 C22orf34Q6ZV56 151 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 ODF3L1Q8IXM7 274 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 MTURNQ8N3F0 131 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 CT45A3Q8NHU0 189 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 FAM168AQ92567 244 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 RPUSD1Q9UJJ7 312 aaKnown RBP4.1□□□□□ -1.75
CCDC39-204ENST00000476379 INSIG2Q9Y5U4 225 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 NCKAP5O14513 1909 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 IGKV1D-17A0A075B6S4 117 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 IGHV1-18A0A0C4DH31 117 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 OR4C46A6NHA9 309 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 HIGD1CA8MV81 97 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 M0R3E3 92 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 P01737 135 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 CTSSP25774 331 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 MORN2Q502X0 79 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 CARFQ8N187 725 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 GCSAMQ8N6F7 178 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 MAPK1IP1LQ8NDC0 245 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 SRSF12Q8WXF0 261 aaKnown RBP4.09□□□□□ -1.75
CCDC39-204ENST00000476379 DIRC2Q96SL1 478 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 AGMATQ9BSE5 352 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 GGTLC1Q9BX51 225 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 APCP25054 2843 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 C21orf140B9A014 251 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 MGST3O14880 152 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 LRRC10Q5BKY1 277 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 TMEM42Q69YG0 159 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 SLC35E4Q6ICL7 350 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 LYPD2Q6UXB3 125 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 CIARTQ8N365 385 aaPredicted RBP4.09□□□□□ -1.75
CCDC39-204ENST00000476379 PNKDQ8N490 385 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 SPRY4Q9C004 299 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 NRN1Q9NPD7 142 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 NUP210LQ5VU65 1888 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 STAB1Q9NY15 2570 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 ISLRO14498 428 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 CT45A10P0DMU9 189 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 BRS3P32247 399 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 KIR2DL2P43627 348 aaPredicted RBP4.09□□□□□ -1.75
CCDC39-204ENST00000476379 HSPE1P61604 102 aaKnown RBP4.09□□□□□ -1.75
CCDC39-204ENST00000476379 RPL24P83731 157 aaKnown RBP4.09□□□□□ -1.75
CCDC39-204ENST00000476379 KDF1Q8NAX2 398 aaPredicted RBP4.09□□□□□ -1.75
CCDC39-204ENST00000476379 C5orf30Q96GV9 206 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 IL19Q9UHD0 177 aa4.09□□□□□ -1.75
CCDC39-204ENST00000476379 TNRC6BQ9UPQ9 1833 aaKnown RBP4.09□□□□□ -1.75
CCDC39-204ENST00000476379 TRBV20OR9-2A0A075B6H5 130 aa4.09□□□□□ -1.76
CCDC39-204ENST00000476379 FOXI3A8MTJ6 420 aaPredicted RBP4.09□□□□□ -1.76
CCDC39-204ENST00000476379 PDE6DO43924 150 aa4.09□□□□□ -1.76
CCDC39-204ENST00000476379 NCR2O95944 276 aa4.09□□□□□ -1.76
CCDC39-204ENST00000476379 MPZP25189 248 aa4.09□□□□□ -1.76
CCDC39-204ENST00000476379 BSPH1Q075Z2 132 aa4.09□□□□□ -1.76
CCDC39-204ENST00000476379 KLRD1Q13241 179 aa4.09□□□□□ -1.76
CCDC39-204ENST00000476379 AARDQ4LEZ3 155 aa4.09□□□□□ -1.76
CCDC39-204ENST00000476379 MBNL2Q5VZF2 373 aaKnown RBP4.09□□□□□ -1.76
CCDC39-204ENST00000476379 Q6ZT83 130 aa4.09□□□□□ -1.76
CCDC39-204ENST00000476379 SLC25A33Q9BSK2 321 aa4.09□□□□□ -1.76
CCDC39-204ENST00000476379 POLR3KQ9Y2Y1 108 aaPredicted RBP4.09□□□□□ -1.76
CCDC39-204ENST00000476379 PTPRBP23467 1997 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 IGLV3-32A0A0A0MS00 114 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 ZNF785A8K8V0 405 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 SMKR1H3BMG3 65 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 AREGP15514 252 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 SRD5A1P18405 259 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 MAS1LP35410 378 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 ZNF124Q15973 351 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 INO80CQ6PI98 192 aaPredicted RBP4.08□□□□□ -1.76
CCDC39-204ENST00000476379 TMEM108Q6UXF1 575 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 FA2HQ7L5A8 372 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 Q8TAT8 98 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 GLMPQ8WWB7 406 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 EGLN1Q9GZT9 426 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 KMT2EQ8IZD2 1858 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 DPRXA6NFQ7 191 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 NUDT3O95989 172 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 IFI6P09912 130 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 LYL1P12980 280 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 TMPRSS3P57727 454 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 BPIFB3P59826 476 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 JOSD1Q15040 202 aaPredicted RBP4.08□□□□□ -1.76
CCDC39-204ENST00000476379 MSMPQ1L6U9 139 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 LSM10Q969L4 123 aaKnown RBP4.08□□□□□ -1.76
CCDC39-204ENST00000476379 ZNF714Q96N38 554 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 ZPBPQ9BS86 351 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 FOXA2Q9Y261 457 aaPredicted RBP4.08□□□□□ -1.76
CCDC39-204ENST00000476379 SRRM4A7MD48 611 aaKnown RBP4.08□□□□□ -1.76
CCDC39-204ENST00000476379 PPIAL4DF5H284 164 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 GNG7O60262 68 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 PRSS1P07477 247 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 TAS2R60P59551 318 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms