RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 NDUFS8O00217 210 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 AHSA1O95433 338 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 LYNX1P0DP58 116 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 CTLA4P16410 223 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 GPX2P18283 190 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 CCNOP22674 350 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 PPIBP23284 216 aaKnown RBP2.06□□□□□ -2.08
PTCD3-211ENST00000476215 FUSP35637 526 aaKnown RBP eCLIP2.06□□□□□ -2.08
PTCD3-211ENST00000476215 TMEM33P57088 247 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 SNRPD2P62316 118 aaKnown RBP2.06□□□□□ -2.08
PTCD3-211ENST00000476215 PMS2P3Q13401 168 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 TNXAQ16473 311 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 LAIR2Q6ISS4 152 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 C5orf46Q6UWT4 87 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 RBM45Q8IUH3 476 aaKnown RBP2.06□□□□□ -2.08
PTCD3-211ENST00000476215 C10orf111Q8N326 155 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 OR9I1Q8NGQ6 314 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 ZMYND19Q96E35 227 aaPredicted RBP2.06□□□□□ -2.08
PTCD3-211ENST00000476215 RAB1BQ9H0U4 201 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 CACYBPQ9HB71 228 aaKnown RBP2.06□□□□□ -2.08
PTCD3-211ENST00000476215 OR5V1Q9UGF6 321 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 POFUT2Q9Y2G5 429 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 USH1CQ9Y6N9 552 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 CHD3Q12873 2000 aaKnown RBP2.06□□□□□ -2.08
PTCD3-211ENST00000476215 VWFP04275 2813 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 CR1P17927 2039 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 IGKV1D-37A0A075B6S9 117 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 A0A1B0GX12 115 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 RAB19A4D1S5 217 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 LRRN3E7EW58 273 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 POLR3GO15318 223 aaPredicted RBP2.05□□□□□ -2.08
PTCD3-211ENST00000476215 ASAH2BP0C7U1 165 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 CD79AP11912 226 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 NQO1P15559 274 aaKnown RBP2.05□□□□□ -2.08
PTCD3-211ENST00000476215 GLRXP35754 106 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 HIST3H3Q16695 136 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 HS3ST5Q8IZT8 346 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 SLC22A24Q8N4F4 322 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 SPICQ8N5J4 248 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 GPR32P1Q8NGA4 272 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 OR4D11Q8NGI4 311 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 OR5J2Q8NH18 312 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 CASTOR1Q8WTX7 329 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 ATP6V1G3Q96LB4 118 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 CGREF1Q99674 301 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 PITX2Q99697 317 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 TSSK6Q9BXA6 273 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 OR2D2Q9H210 308 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 MED29Q9NX70 200 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 GLTPQ9NZD2 209 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 CCDC167Q9P0B6 97 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 CYB5R1Q9UHQ9 305 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 FBXL3Q9UKT7 428 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 NDUFAF1Q9Y375 327 aa2.05□□□□□ -2.08
PTCD3-211ENST00000476215 RBMX2Q9Y388 322 aaKnown RBP2.05□□□□□ -2.08
PTCD3-211ENST00000476215 NOTCH1P46531 2555 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 A0A1W2PRG6 482 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 TRAPPC13A5PLN9 417 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 OR5H14A6NHG9 310 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 CPSF4LA6NMK7 179 aaKnown RBP2.04□□□□□ -2.08
PTCD3-211ENST00000476215 B4DSR2 109 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 CHP2O43745 196 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 UBL3O95164 117 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 OR5F1O95221 314 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 RAB36O95755 333 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 NPPAP01160 153 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 IGF2P01344 180 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 TSPAN19P0C672 248 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 SLC2A1P11166 492 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 CCL2P13500 99 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 SRP14P37108 136 aaKnown RBP2.04□□□□□ -2.08
PTCD3-211ENST00000476215 MOGQ16653 247 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 ELP2Q6IA86 826 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 TTC33Q6PID6 262 aaPredicted RBP2.04□□□□□ -2.08
PTCD3-211ENST00000476215 SSX6Q7RTT6 188 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 GATD1Q8NB37 220 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 SLC30A7Q8NEW0 376 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 OR10A6Q8NH74 314 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 OR2AE1Q8NHA4 323 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 C10orf82Q8WW14 230 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 C11orf40Q8WZ69 217 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 TAMM41Q96BW9 452 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 C20orf166-AS1Q96NR2 134 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 RBP7Q96R05 134 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 OR8B2Q96RD0 313 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 PRSS27Q9BQR3 290 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 ZNF426Q9BUY5 554 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 SLC19A3Q9BZV2 496 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 BPESC1Q9GZL8 116 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 DYNLRB1Q9NP97 96 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 MRPL16Q9NX20 251 aaKnown RBP2.04□□□□□ -2.08
PTCD3-211ENST00000476215 TAAR3PQ9P1P4 343 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 CLEC2DQ9UHP7 191 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 ANGPT4Q9Y264 503 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 WNK2Q9Y3S1 2297 aa2.04□□□□□ -2.08
PTCD3-211ENST00000476215 IGLV3-9A0A075B6K5 115 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 TRBV24-1A0A075B6N3 115 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 IGHV2-26A0A0B4J1V2 119 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 A0A0G2JND7 137 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 C5orf49A4QMS7 147 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms