RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 SIGLECL1Q8N7X8 197 aa2.66□□□□□ -1.98
SMC5-203ENST00000475540 PFN4Q8NHR9 129 aa2.66□□□□□ -1.98
SMC5-203ENST00000475540 ADAT3Q96EY9 351 aaPredicted RBP2.66□□□□□ -1.98
SMC5-203ENST00000475540 OR52A1Q9UKL2 312 aa2.66□□□□□ -1.98
SMC5-203ENST00000475540 LAMTOR2Q9Y2Q5 125 aa2.66□□□□□ -1.98
SMC5-203ENST00000475540 NUBP2Q9Y5Y2 271 aa2.66□□□□□ -1.98
SMC5-203ENST00000475540 NYNRINQ9P2P1 1898 aaKnown RBP2.66□□□□□ -1.98
SMC5-203ENST00000475540 ARHGEF10O15013 1369 aa2.65□□□□□ -1.98
SMC5-203ENST00000475540 A0A0D9SEW6 157 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 A0A1W2PNM2 257 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 TLCD2A6NGC4 264 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 GADD45GO95257 159 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 TCL1BO95988 128 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 PPBPP02775 128 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 NFYBP25208 207 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 UBE2BP63146 152 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 FOXF1Q12946 379 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 KISS1Q15726 138 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 TMEM86AQ8N2M4 240 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 OR52R1Q8NGF1 315 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 LZICQ8WZA0 190 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 TMEM106AQ96A25 262 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 ISOC1Q96CN7 298 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 CCDC115Q96NT0 180 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 GPX7Q96SL4 187 aaPredicted RBP2.65□□□□□ -1.99
SMC5-203ENST00000475540 HIST1H2BLQ99880 126 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 PSORS1C2Q9UIG4 136 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 PLXND1Q9Y4D7 1925 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 ECM29Q5VYK3 1845 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 ZNF407Q9C0G0 2248 aa2.65□□□□□ -1.99
SMC5-203ENST00000475540 ZNF106Q9H2Y7 1883 aaKnown RBP2.65□□□□□ -1.99
SMC5-203ENST00000475540 IGKV1-9A0A0C4DH69 117 aa2.64□□□□□ -1.99
SMC5-203ENST00000475540 MEIS3P1A6NDR6 274 aa2.64□□□□□ -1.99
SMC5-203ENST00000475540 ARPC5O15511 151 aa2.64□□□□□ -1.99
SMC5-203ENST00000475540 TRGC2P03986 189 aa2.64□□□□□ -1.99
SMC5-203ENST00000475540 IGKV1-16P04430 117 aa2.64□□□□□ -1.99
SMC5-203ENST00000475540 FXYD2P54710 66 aa2.64□□□□□ -1.99
SMC5-203ENST00000475540 SUPT4H1P63272 117 aaKnown RBP2.64□□□□□ -1.99
SMC5-203ENST00000475540 FKBP1CQ5VVH2 108 aa2.64□□□□□ -1.99
SMC5-203ENST00000475540 AGTRAPQ6RW13 159 aa2.64□□□□□ -1.99
SMC5-203ENST00000475540 IFT20Q8IY31 132 aa2.64□□□□□ -1.99
SMC5-203ENST00000475540 ST6GALNAC3Q8NDV1 305 aa2.64□□□□□ -1.99
SMC5-203ENST00000475540 WFDC5Q8TCV5 224 aa2.64□□□□□ -1.99
SMC5-203ENST00000475540 BORCS5Q969J3 196 aa2.64□□□□□ -1.99
SMC5-203ENST00000475540 MRPS24Q96EL2 167 aaKnown RBP2.64□□□□□ -1.99
SMC5-203ENST00000475540 PKMYT1Q99640 499 aa2.64□□□□□ -1.99
SMC5-203ENST00000475540 DOHHQ9BU89 302 aa2.64□□□□□ -1.99
SMC5-203ENST00000475540 EPDR1Q9UM22 224 aa2.64□□□□□ -1.99
SMC5-203ENST00000475540 TECPR2O15040 1411 aa2.64□□□□□ -1.99
SMC5-203ENST00000475540 NCAPD3P42695 1498 aa2.64□□□□□ -1.99
SMC5-203ENST00000475540 ARAP1Q96P48 1450 aa2.64□□□□□ -1.99
SMC5-203ENST00000475540 ADGBQ8N7X0 1667 aa2.63□□□□□ -1.99
SMC5-203ENST00000475540 MED1Q15648 1581 aaPredicted RBP2.63□□□□□ -1.99
SMC5-203ENST00000475540 IGHV3-64A0A075B6Q5 118 aa2.63□□□□□ -1.99
SMC5-203ENST00000475540 A0A0D9SG52 128 aa2.63□□□□□ -1.99
SMC5-203ENST00000475540 TRBV10-2A0A0K0K1G8 114 aa2.63□□□□□ -1.99
SMC5-203ENST00000475540 C3orf84H3BNL1 204 aa2.63□□□□□ -1.99
SMC5-203ENST00000475540 ZNF90Q03938 601 aa2.63□□□□□ -1.99
SMC5-203ENST00000475540 PLCXD2Q0VAA5 305 aa2.63□□□□□ -1.99
SMC5-203ENST00000475540 NDUFA5Q16718 116 aa2.63□□□□□ -1.99
SMC5-203ENST00000475540 RTL8BQ17RB0 113 aa2.63□□□□□ -1.99
SMC5-203ENST00000475540 KHDC3LQ587J8 217 aa2.63□□□□□ -1.99
SMC5-203ENST00000475540 DPPA3Q6W0C5 159 aa2.63□□□□□ -1.99
SMC5-203ENST00000475540 DHFR2Q86XF0 187 aa2.63□□□□□ -1.99
SMC5-203ENST00000475540 Q8NDZ9 215 aa2.63□□□□□ -1.99
SMC5-203ENST00000475540 STAG3L4Q8TBR4 150 aa2.63□□□□□ -1.99
SMC5-203ENST00000475540 GSKIPQ9P0R6 139 aa2.63□□□□□ -1.99
SMC5-203ENST00000475540 UBR2Q8IWV8 1755 aa2.63□□□□□ -1.99
SMC5-203ENST00000475540 SLX4Q8IY92 1834 aa2.63□□□□□ -1.99
SMC5-203ENST00000475540 WDR90Q96KV7 1748 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 RIC1Q4ADV7 1423 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 CD109Q6YHK3 1445 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 TRGV10A0A0A0MS01 117 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 TRDV1A0A1B0GX56 115 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 ODF3BA8MYP8 253 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 J3KT08 172 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 J3QRE1 110 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 TMEM256-PLSCR3K7ERE1 68 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 M0R378 163 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 CTSGP08311 255 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 BCL2P10415 239 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 COX6A1P12074 109 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 POLR2HP52434 150 aaKnown RBP2.62□□□□□ -1.99
SMC5-203ENST00000475540 RPS28P62857 69 aaKnown RBP2.62□□□□□ -1.99
SMC5-203ENST00000475540 FAM27BQ5VT28 67 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 C1orf140Q5VVS0 124 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 C22orf39Q6P5X5 142 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 PPTC7Q8NI37 304 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 DCANP1Q8TF63 244 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 TEX37Q96LM6 180 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 JPT1Q9UK76 154 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 CEP152O94986 1710 aa2.62□□□□□ -1.99
SMC5-203ENST00000475540 IGHV1-18A0A0C4DH31 117 aa2.61□□□□□ -1.99
SMC5-203ENST00000475540 C7orf71A4D174 169 aa2.61□□□□□ -1.99
SMC5-203ENST00000475540 ARRDC5A6NEK1 342 aa2.61□□□□□ -1.99
SMC5-203ENST00000475540 OR2T1O43869 369 aa2.61□□□□□ -1.99
SMC5-203ENST00000475540 RNASE4P34096 147 aaKnown RBP2.61□□□□□ -1.99
SMC5-203ENST00000475540 INSL3P51460 131 aa2.61□□□□□ -1.99
SMC5-203ENST00000475540 CCDC153Q494R4 210 aa2.61□□□□□ -1.99
SMC5-203ENST00000475540 PRR15Q8IV56 129 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms