RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 RFNGQ9Y644 331 aa14.59□□□□□ -0.07
VPS36-203ENST00000475375 U3KQE9 123 aa14.59□□□□□ -0.07
VPS36-203ENST00000475375 TEX48A0A1B0GUV7 120 aa14.58□□□□□ -0.08
VPS36-203ENST00000475375 SMIM9A6NGZ8 99 aa14.58□□□□□ -0.08
VPS36-203ENST00000475375 C16orf90A8MZG2 172 aa14.58□□□□□ -0.08
VPS36-203ENST00000475375 PI3P19957 117 aa14.58□□□□□ -0.08
VPS36-203ENST00000475375 TGFBR1P36897 503 aa14.58□□□□□ -0.08
VPS36-203ENST00000475375 NEDD8Q15843 81 aa14.58□□□□□ -0.08
VPS36-203ENST00000475375 TRIM16LQ309B1 348 aa14.58□□□□□ -0.08
VPS36-203ENST00000475375 RNF212Q495C1 297 aa14.58□□□□□ -0.08
VPS36-203ENST00000475375 ZNF705AQ6ZN79 300 aaPredicted RBP14.58□□□□□ -0.08
VPS36-203ENST00000475375 GPX8Q8TED1 209 aa14.58□□□□□ -0.08
VPS36-203ENST00000475375 TP53RKQ96S44 253 aa14.58□□□□□ -0.08
VPS36-203ENST00000475375 NIPSNAP3BQ9BS92 247 aa14.58□□□□□ -0.08
VPS36-203ENST00000475375 ZNF705FA8MVS1 300 aaPredicted RBP14.57□□□□□ -0.08
VPS36-203ENST00000475375 ZNF705DP0CH99 300 aaPredicted RBP14.57□□□□□ -0.08
VPS36-203ENST00000475375 ZNF705BP0CI00 300 aaPredicted RBP14.57□□□□□ -0.08
VPS36-203ENST00000475375 HLA-DRB4P13762 266 aa14.57□□□□□ -0.08
VPS36-203ENST00000475375 OR10J1P30954 320 aa14.57□□□□□ -0.08
VPS36-203ENST00000475375 RND2P52198 227 aa14.57□□□□□ -0.08
VPS36-203ENST00000475375 DHODHQ02127 395 aa14.57□□□□□ -0.08
VPS36-203ENST00000475375 FAM222AQ5U5X8 452 aa14.57□□□□□ -0.08
VPS36-203ENST00000475375 SIGLEC15Q6ZMC9 328 aa14.57□□□□□ -0.08
VPS36-203ENST00000475375 SNX29P2Q8IUI4 249 aa14.57□□□□□ -0.08
VPS36-203ENST00000475375 RRNAD1Q96FB5 475 aaKnown RBP14.57□□□□□ -0.08
VPS36-203ENST00000475375 DKK2Q9UBU2 259 aa14.57□□□□□ -0.08
VPS36-203ENST00000475375 HLA-DRB4X5D2U9 266 aa14.57□□□□□ -0.08
VPS36-203ENST00000475375 M0QYG6 137 aa14.56□□□□□ -0.08
VPS36-203ENST00000475375 IL4P05112 153 aa14.56□□□□□ -0.08
VPS36-203ENST00000475375 P0C879 139 aa14.56□□□□□ -0.08
VPS36-203ENST00000475375 IGLC1P0CG04 106 aa14.56□□□□□ -0.08
VPS36-203ENST00000475375 RCVRNP35243 200 aa14.56□□□□□ -0.08
VPS36-203ENST00000475375 PIGPP57054 158 aa14.56□□□□□ -0.08
VPS36-203ENST00000475375 MAPKAPK5-AS1Q8N8E1 139 aa14.56□□□□□ -0.08
VPS36-203ENST00000475375 YTHDF1Q9BYJ9 559 aaKnown RBP14.56□□□□□ -0.08
VPS36-203ENST00000475375 C3orf85A0A1B0GTC6 90 aa14.55□□□□□ -0.08
VPS36-203ENST00000475375 SMIM31A0A1B0GVY4 71 aa14.55□□□□□ -0.08
VPS36-203ENST00000475375 RPS19P39019 145 aaKnown RBP14.55□□□□□ -0.08
VPS36-203ENST00000475375 YPEL3P61236 119 aaPredicted RBP14.55□□□□□ -0.08
VPS36-203ENST00000475375 RND3P61587 244 aa14.55□□□□□ -0.08
VPS36-203ENST00000475375 USF2Q15853 346 aaPredicted RBP14.55□□□□□ -0.08
VPS36-203ENST00000475375 Q9H521 79 aa14.55□□□□□ -0.08
VPS36-203ENST00000475375 SEPSECSQ9HD40 501 aaKnown RBP14.55□□□□□ -0.08
VPS36-203ENST00000475375 TMED3Q9Y3Q3 217 aa14.55□□□□□ -0.08
VPS36-203ENST00000475375 GSTZ1O43708 216 aaPredicted RBP14.54□□□□□ -0.08
VPS36-203ENST00000475375 HTR2BP41595 481 aa14.54□□□□□ -0.08
VPS36-203ENST00000475375 NKX2-1P43699 371 aaPredicted RBP14.54□□□□□ -0.08
VPS36-203ENST00000475375 BSXQ3C1V8 233 aa14.54□□□□□ -0.08
VPS36-203ENST00000475375 SP6Q3SY56 376 aa14.54□□□□□ -0.08
VPS36-203ENST00000475375 PRSS54Q6PEW0 395 aa14.54□□□□□ -0.08
VPS36-203ENST00000475375 ZNF486Q96H40 463 aaPredicted RBP14.54□□□□□ -0.08
VPS36-203ENST00000475375 LINC00052Q96N35 136 aa14.54□□□□□ -0.08
VPS36-203ENST00000475375 SCPEP1Q9HB40 452 aa14.54□□□□□ -0.08
VPS36-203ENST00000475375 HEYLQ9NQ87 328 aaPredicted RBP14.54□□□□□ -0.08
VPS36-203ENST00000475375 A0A0G2JRQ6 117 aa14.53□□□□□ -0.08
VPS36-203ENST00000475375 SLC25A4P12235 298 aa14.53□□□□□ -0.08
VPS36-203ENST00000475375 DEFB1P60022 68 aa14.53□□□□□ -0.08
VPS36-203ENST00000475375 GDF5OSQ5U4N7 250 aa14.53□□□□□ -0.08
VPS36-203ENST00000475375 TMEM88Q6PEY1 159 aa14.53□□□□□ -0.08
VPS36-203ENST00000475375 OR4B1Q8NGF8 309 aa14.53□□□□□ -0.08
VPS36-203ENST00000475375 BUB3O43684 328 aa14.52□□□□□ -0.09
VPS36-203ENST00000475375 CDK2AP2O75956 126 aa14.52□□□□□ -0.09
VPS36-203ENST00000475375 RD3LP0DJH9 198 aa14.52□□□□□ -0.09
VPS36-203ENST00000475375 SPCS3P61009 180 aa14.52□□□□□ -0.09
VPS36-203ENST00000475375 LSM3P62310 102 aaKnown RBP14.52□□□□□ -0.09
VPS36-203ENST00000475375 RNASE12Q5GAN4 147 aaKnown RBP14.52□□□□□ -0.09
VPS36-203ENST00000475375 C7orf50Q9BRJ6 194 aaKnown RBP14.52□□□□□ -0.09
VPS36-203ENST00000475375 ATG101Q9BSB4 218 aa14.52□□□□□ -0.09
VPS36-203ENST00000475375 COPZ2Q9P299 210 aa14.52□□□□□ -0.09
VPS36-203ENST00000475375 COMMD3Q9UBI1 195 aa14.52□□□□□ -0.09
VPS36-203ENST00000475375 GOLT1BQ9Y3E0 138 aa14.52□□□□□ -0.09
VPS36-203ENST00000475375 HBE1P02100 147 aa14.51□□□□□ -0.09
VPS36-203ENST00000475375 TNP2Q05952 138 aa14.51□□□□□ -0.09
VPS36-203ENST00000475375 NPIPB3Q92617 1050 aa14.51□□□□□ -0.09
VPS36-203ENST00000475375 ACY3Q96HD9 319 aa14.51□□□□□ -0.09
VPS36-203ENST00000475375 YTHDF2Q9Y5A9 579 aaKnown RBP14.51□□□□□ -0.09
VPS36-203ENST00000475375 LOC102723971A0A1B0GUV8 181 aa14.5□□□□□ -0.09
VPS36-203ENST00000475375 ID1P41134 155 aa14.5□□□□□ -0.09
VPS36-203ENST00000475375 DAD1P61803 113 aa14.5□□□□□ -0.09
VPS36-203ENST00000475375 OXA1LQ15070 435 aa14.5□□□□□ -0.09
VPS36-203ENST00000475375 RNASE10Q5GAN6 216 aaKnown RBP14.5□□□□□ -0.09
VPS36-203ENST00000475375 CCDC71LQ8N9Z2 235 aa14.5□□□□□ -0.09
VPS36-203ENST00000475375 COQ8AQ8NI60 647 aa14.5□□□□□ -0.09
VPS36-203ENST00000475375 RNASEH2CQ8TDP1 164 aaKnown RBP14.5□□□□□ -0.09
VPS36-203ENST00000475375 PBDC1Q9BVG4 233 aa14.5□□□□□ -0.09
VPS36-203ENST00000475375 SAV1Q9H4B6 383 aaPredicted RBP14.5□□□□□ -0.09
VPS36-203ENST00000475375 NACAE9PAV3 2078 aa14.5□□□□□ -0.09
VPS36-203ENST00000475375 CEBPZOSA8MTT3 80 aa14.49□□□□□ -0.09
VPS36-203ENST00000475375 TOMM40O96008 361 aa14.49□□□□□ -0.09
VPS36-203ENST00000475375 C2orf83Q53S99 150 aa14.49□□□□□ -0.09
VPS36-203ENST00000475375 ETFRF1Q6IPR1 90 aa14.49□□□□□ -0.09
VPS36-203ENST00000475375 FOXI2Q6ZQN5 318 aa14.49□□□□□ -0.09
VPS36-203ENST00000475375 SLC24A4Q8NFF2 622 aa14.49□□□□□ -0.09
VPS36-203ENST00000475375 OR51G1Q8NGK1 321 aa14.49□□□□□ -0.09
VPS36-203ENST00000475375 SLC35B3Q9H1N7 401 aa14.49□□□□□ -0.09
VPS36-203ENST00000475375 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.49□□□□□ -0.09
VPS36-203ENST00000475375 APOA1P02647 267 aa14.48□□□□□ -0.09
VPS36-203ENST00000475375 FAM3BP58499 235 aaPredicted RBP14.48□□□□□ -0.09
VPS36-203ENST00000475375 GSG1LQ6UXU4 331 aa14.48□□□□□ -0.09
VPS36-203ENST00000475375 ZNF709Q8N972 641 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms