RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 SS18L1O75177 396 aaPredicted RBP8□□□□□ -1.13
CDH23-211ENST00000475158 IGKV1-5P01602 117 aa8□□□□□ -1.13
CDH23-211ENST00000475158 RIGQ13278 110 aa8□□□□□ -1.13
CDH23-211ENST00000475158 Q1RN00 199 aa8□□□□□ -1.13
CDH23-211ENST00000475158 TMEM116Q8NCL8 245 aa8□□□□□ -1.13
CDH23-211ENST00000475158 XIRP2A4UGR9 3374 aa8□□□□□ -1.13
CDH23-211ENST00000475158 MKI67P46013 3256 aaKnown RBP8□□□□□ -1.13
CDH23-211ENST00000475158 IGKV1D-33P01593 117 aa8□□□□□ -1.13
CDH23-211ENST00000475158 IGKV1-33P01594 117 aa8□□□□□ -1.13
CDH23-211ENST00000475158 UCNP55089 124 aa8□□□□□ -1.13
CDH23-211ENST00000475158 ZNF146Q15072 292 aa8□□□□□ -1.13
CDH23-211ENST00000475158 MTURNQ8N3F0 131 aa8□□□□□ -1.13
CDH23-211ENST00000475158 KCNS1Q96KK3 526 aa8□□□□□ -1.13
CDH23-211ENST00000475158 PROK2Q9HC23 129 aa8□□□□□ -1.13
CDH23-211ENST00000475158 CDC42EP3Q9UKI2 254 aa8□□□□□ -1.13
CDH23-211ENST00000475158 FOXA2Q9Y261 457 aaPredicted RBP8□□□□□ -1.13
CDH23-211ENST00000475158 COX11Q9Y6N1 276 aa8□□□□□ -1.13
CDH23-211ENST00000475158 LOC107984156A0A0G2JMH3 177 aa8□□□□□ -1.13
CDH23-211ENST00000475158 PYYP10082 97 aa8□□□□□ -1.13
CDH23-211ENST00000475158 DUTP33316 252 aaKnown RBP8□□□□□ -1.13
CDH23-211ENST00000475158 DNLZQ5SXM8 178 aa8□□□□□ -1.13
CDH23-211ENST00000475158 C10orf91Q5T1B1 145 aa8□□□□□ -1.13
CDH23-211ENST00000475158 ARL17AQ8IVW1 177 aa8□□□□□ -1.13
CDH23-211ENST00000475158 IFI27L2Q9H2X8 130 aa8□□□□□ -1.13
CDH23-211ENST00000475158 TRAV30A0A087WSZ9 112 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 CORTO00230 105 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 RBFOX2O43251 390 aaKnown RBP eCLIP7.99□□□□□ -1.13
CDH23-211ENST00000475158 NBEAP1P0C6P0 100 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 TWIST1Q15672 202 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 RNASE7Q9H1E1 156 aaKnown RBP7.99□□□□□ -1.13
CDH23-211ENST00000475158 KLK15Q9H2R5 256 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 LIME1Q9H400 295 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 CRIM1Q9NZV1 1036 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 LINC00527Q9UJ94 153 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 C7orf71A4D174 169 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 ZNF503-AS2A6NEH8 195 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 B9A039 149 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 IGHV1-46P01743 117 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 HLA-DQA1P01909 254 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 DLX1P56177 255 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 TMEM97Q5BJF2 176 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 TTC32Q5I0X7 151 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 STPG4Q8N801 248 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 C1orf162Q8NEQ5 155 aaPredicted RBP7.99□□□□□ -1.13
CDH23-211ENST00000475158 Q8NFD4 153 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 OR1N2Q8NGR9 330 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 C1orf147Q96MC9 270 aaPredicted RBP7.99□□□□□ -1.13
CDH23-211ENST00000475158 MLNRO43193 412 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 FAM106CPP0CH98 169 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 RSPO1Q2MKA7 263 aaPredicted RBP7.99□□□□□ -1.13
CDH23-211ENST00000475158 RPP25LQ8N5L8 163 aaKnown RBP7.99□□□□□ -1.13
CDH23-211ENST00000475158 OR2K2Q8NGT1 345 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 C16orf92Q96LL3 132 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 TMEM70Q9BUB7 260 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 FRMPD3Q5JV73 1810 aa7.99□□□□□ -1.13
CDH23-211ENST00000475158 KIF26AQ9ULI4 1882 aaPredicted RBP7.98□□□□□ -1.13
CDH23-211ENST00000475158 NAV3Q8IVL0 2385 aa7.98□□□□□ -1.13
CDH23-211ENST00000475158 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.98□□□□□ -1.13
CDH23-211ENST00000475158 RPL7P18124 248 aaKnown RBP7.98□□□□□ -1.13
CDH23-211ENST00000475158 GNG5P63218 68 aa7.98□□□□□ -1.13
CDH23-211ENST00000475158 MBNL2Q5VZF2 373 aaKnown RBP7.98□□□□□ -1.13
CDH23-211ENST00000475158 LINC00473A8K010 186 aa7.98□□□□□ -1.13
CDH23-211ENST00000475158 CDKN1BP46527 198 aa7.98□□□□□ -1.13
CDH23-211ENST00000475158 CD177Q8N6Q3 437 aa7.98□□□□□ -1.13
CDH23-211ENST00000475158 PLXNA2O75051 1894 aa7.98□□□□□ -1.13
CDH23-211ENST00000475158 A0A1B0GWB2 263 aa7.98□□□□□ -1.13
CDH23-211ENST00000475158 TMEM189A5PLL7 270 aa7.98□□□□□ -1.13
CDH23-211ENST00000475158 CCL25O15444 150 aa7.98□□□□□ -1.13
CDH23-211ENST00000475158 HLA-DRB1P01911 266 aa7.98□□□□□ -1.13
CDH23-211ENST00000475158 ANOS1P23352 680 aa7.98□□□□□ -1.13
CDH23-211ENST00000475158 MFAP4P55083 255 aa7.98□□□□□ -1.13
CDH23-211ENST00000475158 SPACA3Q8IXA5 215 aa7.98□□□□□ -1.13
CDH23-211ENST00000475158 OSR1Q8TAX0 266 aaPredicted RBP7.98□□□□□ -1.13
CDH23-211ENST00000475158 COL25A1Q9BXS0 654 aaPredicted RBP7.98□□□□□ -1.13
CDH23-211ENST00000475158 JKAMPQ9P055 326 aa7.98□□□□□ -1.13
CDH23-211ENST00000475158 MLANAQ16655 118 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 DNM1P46Q6ZS02 220 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 MDS2Q8NDY4 140 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 OR10AG1Q8NH19 301 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 DPM3Q9P2X0 92 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 IGKV1-6A0A0C4DH72 117 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 FOXI3A8MTJ6 420 aaPredicted RBP7.97□□□□□ -1.13
CDH23-211ENST00000475158 SRRM5B3KS81 715 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 CKS2P33552 79 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 NMSQ5H8A3 153 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 TMEM42Q69YG0 159 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 NEUROG1Q92886 237 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 CITED1Q99966 193 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 C5orf42Q9H799 3197 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 TRAV5A0A0B4J249 113 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 IGHV3-11P01762 117 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 TYMSP04818 313 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 TSPOP30536 169 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 GPR183P32249 361 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 MAS1LP35410 378 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 TMEM78Q5T7P6 136 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 COQ2Q96H96 371 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 IGHV3OR16-12A0A075B7B8 117 aa7.97□□□□□ -1.13
CDH23-211ENST00000475158 RNASE6Q93091 150 aaKnown RBP7.97□□□□□ -1.13
CDH23-211ENST00000475158 SLC25A33Q9BSK2 321 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms