RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 PRRG2O14669 202 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 SMCPP49901 116 aaPredicted RBP2.74□□□□□ -1.97
UBR3-208ENST00000474426 ECSCRQ19T08 205 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 GAGE13Q4V321 117 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 Q75L30 129 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 C6orf223Q8N319 242 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 OR51H1Q8NH63 302 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 TNFRSF19Q9NS68 423 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 COL16A1Q07092 1604 aaPredicted RBP2.74□□□□□ -1.97
UBR3-208ENST00000474426 DLG5Q8TDM6 1919 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 ARID1BQ8NFD5 2236 aaPredicted RBP2.74□□□□□ -1.97
UBR3-208ENST00000474426 A0A0A6YYD4 124 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 WI2-2373I1.2A0A1W2PRP0 233 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 K7EM74 188 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 DEDDO75618 318 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 SERF1AO75920 110 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 IGHV3-7P01780 117 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 TRACP01848 142 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 APOC2P02655 101 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 GYPAP02724 150 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 HSPB1P04792 205 aaKnown RBP2.74□□□□□ -1.97
UBR3-208ENST00000474426 FGF1P05230 155 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 SRP19P09132 144 aaKnown RBP2.74□□□□□ -1.97
UBR3-208ENST00000474426 COX7CP15954 63 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 CAV3P56539 151 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 ERCC8Q13216 396 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 POLR2J2Q9GZM3 115 aaKnown RBP2.74□□□□□ -1.97
UBR3-208ENST00000474426 GABARAPL1Q9H0R8 117 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 SCRT2Q9NQ03 307 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 TJP1Q07157 1748 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 PARP4Q9UKK3 1724 aaKnown RBP2.74□□□□□ -1.97
UBR3-208ENST00000474426 ZNF236Q9UL36 1845 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 TRBV7-6A0A0J9YX20 115 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 A1L4Q6 167 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 FAM220BPB1ANY3 271 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 PYYP10082 97 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 MYCNOSP40205 109 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 CACNG7P62955 275 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 ARL16Q0P5N6 197 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 RSPO1Q2MKA7 263 aaPredicted RBP2.74□□□□□ -1.97
UBR3-208ENST00000474426 RNASE12Q5GAN4 147 aaKnown RBP2.74□□□□□ -1.97
UBR3-208ENST00000474426 TEPPQ6URK8 271 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 RPP25LQ8N5L8 163 aaKnown RBP2.74□□□□□ -1.97
UBR3-208ENST00000474426 RNF182Q8N6D2 247 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 OR52N5Q8NH56 324 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 AQP3Q92482 292 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 LINC00479Q96M42 142 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 PRSS27Q9BQR3 290 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 C11orf68Q9H3H3 251 aaKnown RBP2.74□□□□□ -1.97
UBR3-208ENST00000474426 DPH3P1Q9H4G8 78 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 NAA60Q9H7X0 242 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 OR2W1Q9Y3N9 320 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 POLEQ07864 2286 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 NUMA1Q14980 2115 aa2.74□□□□□ -1.97
UBR3-208ENST00000474426 ARHGAP21Q5T5U3 1957 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 TRAV12-2A0A075B6T6 113 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 FFAR1O14842 300 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 TIMM23O14925 209 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 PDCD6O75340 191 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 LGALS2P05162 132 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 INAFM2P0DMQ5 153 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 GLI4P10075 376 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 HLA-DRB4P13762 266 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 HLA-DMBP28068 263 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 CENPWQ5EE01 88 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 RUSC1-AS1Q66K80 236 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 SP5Q6BEB4 398 aaPredicted RBP2.73□□□□□ -1.97
UBR3-208ENST00000474426 ATP5L2Q7Z4Y8 100 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 MRGPREQ86SM8 312 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 ZNF843Q8N446 348 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 OR2T10Q8NGZ9 312 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 PPDPFLQ8WWR9 84 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 CCL17Q92583 94 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 CST11Q9H112 138 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 SLC39A9Q9NUM3 307 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 HLA-DRB4X5D2U9 266 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 GBF1Q92538 1859 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 TRBV19A0A075B6N1 114 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 TRBV7-7A0A0K0K1E9 115 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 K7N7A8 449 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 FAM19A3Q7Z5A8 133 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 TMEM75Q8N9X5 138 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 TMEM255BQ8WV15 326 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 PMCHL2Q9BQD1 86 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 FIS1Q9Y3D6 152 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 PTPRDP23468 1912 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 NEXMIFQ5QGS0 1516 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 EML6Q6ZMW3 1958 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 TRPM6Q9BX84 2022 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 IGKV1D-8A0A087WSZ0 117 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 IGLV1-36A0A0B4J1U3 117 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 E9PLD3 99 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 C11orf98E9PRG8 122 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 SS18L1O75177 396 aaPredicted RBP2.73□□□□□ -1.97
UBR3-208ENST00000474426 SOD1P00441 154 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 C1QAP02745 245 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 CD7P09564 240 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 GP1BBP13224 206 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 CFAP126Q5VTH2 177 aa2.73□□□□□ -1.97
UBR3-208ENST00000474426 NCBP2-AS2Q69YL0 99 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms