RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 IGHG2P01859 326 aa11.5□□□□□ -0.57
HIF3A-206ENST00000472815 AMY1AP04745 511 aa11.5□□□□□ -0.57
HIF3A-206ENST00000472815 HNF1AP20823 631 aa11.5□□□□□ -0.57
HIF3A-206ENST00000472815 FGF8P55075 233 aaPredicted RBP11.5□□□□□ -0.57
HIF3A-206ENST00000472815 SCGB2A2Q13296 93 aa11.5□□□□□ -0.57
HIF3A-206ENST00000472815 KHDC3LQ587J8 217 aa11.5□□□□□ -0.57
HIF3A-206ENST00000472815 Q6YL49 198 aa11.5□□□□□ -0.57
HIF3A-206ENST00000472815 BCL6BQ8N143 479 aaPredicted RBP11.5□□□□□ -0.57
HIF3A-206ENST00000472815 CIARTQ8N365 385 aaPredicted RBP11.5□□□□□ -0.57
HIF3A-206ENST00000472815 FANCD2OSQ96PS1 177 aa11.5□□□□□ -0.57
HIF3A-206ENST00000472815 TXN2Q99757 166 aa11.5□□□□□ -0.57
HIF3A-206ENST00000472815 ZNF355PQ9NSJ1 428 aa11.5□□□□□ -0.57
HIF3A-206ENST00000472815 GAR1Q9NY12 217 aaKnown RBP11.5□□□□□ -0.57
HIF3A-206ENST00000472815 GNG13Q9P2W3 67 aa11.5□□□□□ -0.57
HIF3A-206ENST00000472815 SOX21Q9Y651 276 aaPredicted RBP11.5□□□□□ -0.57
HIF3A-206ENST00000472815 IGKV1D-37A0A075B6S9 117 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 IGHV3-21A0A0B4J1V1 117 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 MDFIC2A0A1B0GVS7 189 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 CD5LO43866 347 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 COX7A2P2O60397 106 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 IGF1P05019 195 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 KLK9Q2XQG4 91 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 GCSAMLQ5JQS6 135 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 FAM78BQ5VT40 261 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 SSX7Q7RTT5 188 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 S100A7AQ86SG5 101 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 IQCF2Q8IXL9 164 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 VN1R17PQ8TDU5 208 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 TMEM231Q9H6L2 316 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 DNAJC4Q9NNZ3 241 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 VPREB3Q9UKI3 123 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 KLK9Q9UKQ9 250 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 CYSRT1A8MQ03 144 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 AP4M1O00189 453 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 GNG7O60262 68 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 IGHV4-59P01825 116 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 STAG3L2P0CL84 134 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 STAG3L3P0CL85 134 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 CCL20P78556 96 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 ZNF506Q5JVG8 444 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 NECAP1Q8NC96 275 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 LINC00052Q96N35 136 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 SEC11CQ9BY50 192 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 PRDM13Q9H4Q3 707 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 C21orf62Q9NYP8 219 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 MRPL36Q9P0J6 103 aaKnown RBP11.49□□□□□ -0.57
HIF3A-206ENST00000472815 FBXL7Q9UJT9 491 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 FUT9Q9Y231 359 aa11.49□□□□□ -0.57
HIF3A-206ENST00000472815 F8W036 122 aa11.48□□□□□ -0.57
HIF3A-206ENST00000472815 OR2J3O76001 311 aa11.48□□□□□ -0.57
HIF3A-206ENST00000472815 HSPB1P04792 205 aaKnown RBP11.48□□□□□ -0.57
HIF3A-206ENST00000472815 OR5G3P0C626 314 aa11.48□□□□□ -0.57
HIF3A-206ENST00000472815 IGLC1P0CG04 106 aa11.48□□□□□ -0.57
HIF3A-206ENST00000472815 BCL2P10415 239 aa11.48□□□□□ -0.57
HIF3A-206ENST00000472815 SRP14P37108 136 aaKnown RBP11.48□□□□□ -0.57
HIF3A-206ENST00000472815 ZNF90Q03938 601 aa11.48□□□□□ -0.57
HIF3A-206ENST00000472815 HAGHQ16775 308 aa11.48□□□□□ -0.57
HIF3A-206ENST00000472815 C10orf113Q5VZT2 155 aa11.48□□□□□ -0.57
HIF3A-206ENST00000472815 SLC35B3Q9H1N7 401 aa11.48□□□□□ -0.57
HIF3A-206ENST00000472815 TECRQ9NZ01 308 aaKnown RBP11.48□□□□□ -0.57
HIF3A-206ENST00000472815 VAX2Q9UIW0 290 aa11.48□□□□□ -0.57
HIF3A-206ENST00000472815 ZNF580Q9UK33 172 aa11.48□□□□□ -0.57
HIF3A-206ENST00000472815 ZANQ9Y493 2812 aa11.48□□□□□ -0.57
HIF3A-206ENST00000472815 SH2D7A6NKC9 451 aaPredicted RBP11.47□□□□□ -0.57
HIF3A-206ENST00000472815 H3BUA1 57 aa11.47□□□□□ -0.57
HIF3A-206ENST00000472815 HMGB3O15347 200 aaKnown RBP11.47□□□□□ -0.57
HIF3A-206ENST00000472815 SFTA3P0C7M3 94 aa11.47□□□□□ -0.57
HIF3A-206ENST00000472815 GATA2P23769 480 aaPredicted RBP11.47□□□□□ -0.57
HIF3A-206ENST00000472815 FCGR2BP31994 310 aaPredicted RBP11.47□□□□□ -0.57
HIF3A-206ENST00000472815 SRSF3P84103 164 aaKnown RBP11.47□□□□□ -0.57
HIF3A-206ENST00000472815 Q56UQ5 140 aa11.47□□□□□ -0.57
HIF3A-206ENST00000472815 PQLC2Q6ZP29 291 aa11.47□□□□□ -0.57
HIF3A-206ENST00000472815 SEPSECSQ9HD40 501 aaKnown RBP11.47□□□□□ -0.57
HIF3A-206ENST00000472815 SVEP1Q4LDE5 3571 aa11.47□□□□□ -0.57
HIF3A-206ENST00000472815 LOC102723971A0A1B0GUV8 181 aa11.46□□□□□ -0.57
HIF3A-206ENST00000472815 NDUFS6O75380 124 aaKnown RBP11.46□□□□□ -0.57
HIF3A-206ENST00000472815 CCDC28AQ8IWP9 274 aa11.46□□□□□ -0.57
HIF3A-206ENST00000472815 TXNDC17Q9BRA2 123 aa11.46□□□□□ -0.57
HIF3A-206ENST00000472815 TRBV9A0A0B4J1U6 114 aa11.46□□□□□ -0.58
HIF3A-206ENST00000472815 FAM223BA6NKX1 122 aa11.46□□□□□ -0.58
HIF3A-206ENST00000472815 G3V318 75 aa11.46□□□□□ -0.58
HIF3A-206ENST00000472815 HYPMO75409 117 aa11.46□□□□□ -0.58
HIF3A-206ENST00000472815 BRI3O95415 125 aa11.46□□□□□ -0.58
HIF3A-206ENST00000472815 APOC3P02656 99 aa11.46□□□□□ -0.58
HIF3A-206ENST00000472815 RD3LP0DJH9 198 aa11.46□□□□□ -0.58
HIF3A-206ENST00000472815 ARL14EPLP0DKL9 152 aa11.46□□□□□ -0.58
HIF3A-206ENST00000472815 C8orf88P0DMB2 117 aa11.46□□□□□ -0.58
HIF3A-206ENST00000472815 S100A7P31151 101 aa11.46□□□□□ -0.58
HIF3A-206ENST00000472815 PLP1P60201 277 aa11.46□□□□□ -0.58
HIF3A-206ENST00000472815 YPEL3P61236 119 aaPredicted RBP11.46□□□□□ -0.58
HIF3A-206ENST00000472815 RHOGP84095 191 aa11.46□□□□□ -0.58
HIF3A-206ENST00000472815 C15orf32Q32M92 178 aa11.46□□□□□ -0.58
HIF3A-206ENST00000472815 FAM223AQ8IWN6 122 aa11.46□□□□□ -0.58
HIF3A-206ENST00000472815 EEF1AKMT3Q96AZ1 226 aa11.46□□□□□ -0.58
HIF3A-206ENST00000472815 ATP6V0BQ99437 205 aa11.46□□□□□ -0.58
HIF3A-206ENST00000472815 SCRT1Q9BWW7 348 aa11.46□□□□□ -0.58
HIF3A-206ENST00000472815 TMEM167BQ9NRX6 74 aa11.46□□□□□ -0.58
HIF3A-206ENST00000472815 TRBV7-1A0A0A6YYK4 115 aa11.45□□□□□ -0.58
HIF3A-206ENST00000472815 LINC01548A6NM66 108 aa11.45□□□□□ -0.58
HIF3A-206ENST00000472815 NDUFB8O95169 186 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms