RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 YPEL3P61236 119 aaPredicted RBP11.54□□□□□ -0.56
SDC3-203ENST00000471567 SPANXN5Q5MJ07 72 aa11.54□□□□□ -0.56
SDC3-203ENST00000471567 TOMM20LQ6UXN7 152 aa11.54□□□□□ -0.56
SDC3-203ENST00000471567 NPIPB3Q92617 1050 aa11.54□□□□□ -0.56
SDC3-203ENST00000471567 SLC35E1Q96K37 410 aa11.54□□□□□ -0.56
SDC3-203ENST00000471567 C2orf50Q96LR7 162 aa11.54□□□□□ -0.56
SDC3-203ENST00000471567 RAB40CQ96S21 281 aa11.54□□□□□ -0.56
SDC3-203ENST00000471567 PSENENQ9NZ42 101 aa11.54□□□□□ -0.56
SDC3-203ENST00000471567 PUS1Q9Y606 427 aaKnown RBP eCLIP11.54□□□□□ -0.56
SDC3-203ENST00000471567 IGHV3OR16-8A0A075B7F1 116 aa11.53□□□□□ -0.56
SDC3-203ENST00000471567 TRAV14DV4A0A0A6YYC5 116 aa11.53□□□□□ -0.56
SDC3-203ENST00000471567 ZNF785A8K8V0 405 aa11.53□□□□□ -0.56
SDC3-203ENST00000471567 FAM25EA8MYX2 175 aa11.53□□□□□ -0.56
SDC3-203ENST00000471567 SSSCA1O60232 199 aa11.53□□□□□ -0.56
SDC3-203ENST00000471567 SCGB1D2O95969 90 aa11.53□□□□□ -0.56
SDC3-203ENST00000471567 MBPP02686 304 aaPredicted RBP11.53□□□□□ -0.56
SDC3-203ENST00000471567 TIGITQ495A1 244 aa11.53□□□□□ -0.56
SDC3-203ENST00000471567 BTNL8Q6UX41 500 aa11.53□□□□□ -0.56
SDC3-203ENST00000471567 GSG1LQ6UXU4 331 aa11.53□□□□□ -0.56
SDC3-203ENST00000471567 ACY3Q96HD9 319 aa11.53□□□□□ -0.56
SDC3-203ENST00000471567 ZFAND3Q9H8U3 227 aa11.53□□□□□ -0.56
SDC3-203ENST00000471567 SMPXQ9UHP9 88 aa11.53□□□□□ -0.56
SDC3-203ENST00000471567 PAIP2BQ9ULR5 123 aaKnown RBP11.53□□□□□ -0.56
SDC3-203ENST00000471567 SMAD5-AS1Q9Y6J3 95 aa11.53□□□□□ -0.56
SDC3-203ENST00000471567 IGHV7-4-1A0A0J9YVY3 117 aa11.52□□□□□ -0.57
SDC3-203ENST00000471567 PRSS46E5RG02 174 aa11.52□□□□□ -0.57
SDC3-203ENST00000471567 ZNF207O43670 478 aaKnown RBP11.52□□□□□ -0.57
SDC3-203ENST00000471567 PAX9P55771 341 aa11.52□□□□□ -0.57
SDC3-203ENST00000471567 GAMTQ14353 236 aa11.52□□□□□ -0.57
SDC3-203ENST00000471567 GTSCR1Q86UQ5 136 aa11.52□□□□□ -0.57
SDC3-203ENST00000471567 TMEM61Q8N0U2 210 aa11.52□□□□□ -0.57
SDC3-203ENST00000471567 Q8N1Y9 231 aa11.52□□□□□ -0.57
SDC3-203ENST00000471567 Q8WTZ3 238 aa11.52□□□□□ -0.57
SDC3-203ENST00000471567 H3BP45 60 aa11.51□□□□□ -0.57
SDC3-203ENST00000471567 CHEK1O14757 476 aa11.51□□□□□ -0.57
SDC3-203ENST00000471567 TSC22D2O75157 780 aa11.51□□□□□ -0.57
SDC3-203ENST00000471567 PTTG1O95997 202 aa11.51□□□□□ -0.57
SDC3-203ENST00000471567 BMI1P35226 326 aa11.51□□□□□ -0.57
SDC3-203ENST00000471567 IL15RAQ13261 267 aa11.51□□□□□ -0.57
SDC3-203ENST00000471567 GUCA2BQ16661 112 aa11.51□□□□□ -0.57
SDC3-203ENST00000471567 LAMTOR1Q6IAA8 161 aa11.51□□□□□ -0.57
SDC3-203ENST00000471567 RBPMS2Q6ZRY4 209 aaKnown RBP11.51□□□□□ -0.57
SDC3-203ENST00000471567 WDR89Q96FK6 387 aaPredicted RBP11.51□□□□□ -0.57
SDC3-203ENST00000471567 RHPN1-AS1Q9BWJ2 59 aa11.51□□□□□ -0.57
SDC3-203ENST00000471567 RCL1Q9Y2P8 373 aaKnown RBP11.51□□□□□ -0.57
SDC3-203ENST00000471567 PRKDCP78527 4128 aaKnown RBP11.51□□□□□ -0.57
SDC3-203ENST00000471567 SCAF4O95104 1147 aaKnown RBP11.5□□□□□ -0.57
SDC3-203ENST00000471567 TOMM40O96008 361 aa11.5□□□□□ -0.57
SDC3-203ENST00000471567 NPPCP23582 126 aa11.5□□□□□ -0.57
SDC3-203ENST00000471567 TMEM14EPQ6UXP3 125 aa11.5□□□□□ -0.57
SDC3-203ENST00000471567 B9D2Q9BPU9 175 aa11.5□□□□□ -0.57
SDC3-203ENST00000471567 A0A1W2PS18 150 aa11.49□□□□□ -0.57
SDC3-203ENST00000471567 C7orf66A4D0T2 115 aa11.49□□□□□ -0.57
SDC3-203ENST00000471567 ZFP92A6NM28 416 aa11.49□□□□□ -0.57
SDC3-203ENST00000471567 A8MZ25 164 aa11.49□□□□□ -0.57
SDC3-203ENST00000471567 K7EPK0 472 aa11.49□□□□□ -0.57
SDC3-203ENST00000471567 L7N2F9 121 aa11.49□□□□□ -0.57
SDC3-203ENST00000471567 TSPAN4O14817 238 aa11.49□□□□□ -0.57
SDC3-203ENST00000471567 CD5P06127 495 aa11.49□□□□□ -0.57
SDC3-203ENST00000471567 FABP1P07148 127 aa11.49□□□□□ -0.57
SDC3-203ENST00000471567 RD3LP0DJH9 198 aa11.49□□□□□ -0.57
SDC3-203ENST00000471567 VAMP2P63027 116 aa11.49□□□□□ -0.57
SDC3-203ENST00000471567 METTL26Q96S19 204 aa11.49□□□□□ -0.57
SDC3-203ENST00000471567 TRGV9Q99603 122 aa11.49□□□□□ -0.57
SDC3-203ENST00000471567 SPAG8Q99932 426 aaPredicted RBP11.49□□□□□ -0.57
SDC3-203ENST00000471567 TMEM231Q9H6L2 316 aa11.49□□□□□ -0.57
SDC3-203ENST00000471567 VSIRQ9H7M9 311 aa11.49□□□□□ -0.57
SDC3-203ENST00000471567 IGKV1D-37A0A075B6S9 117 aa11.48□□□□□ -0.57
SDC3-203ENST00000471567 PMS2P5A8MQ11 134 aa11.48□□□□□ -0.57
SDC3-203ENST00000471567 PVALBP20472 110 aaPredicted RBP11.48□□□□□ -0.57
SDC3-203ENST00000471567 CRYBB3P26998 211 aa11.48□□□□□ -0.57
SDC3-203ENST00000471567 THAP8Q8NA92 274 aa11.48□□□□□ -0.57
SDC3-203ENST00000471567 NEURL2Q9BR09 285 aa11.48□□□□□ -0.57
SDC3-203ENST00000471567 LSM5Q9Y4Y9 91 aaKnown RBP11.48□□□□□ -0.57
SDC3-203ENST00000471567 SELENOKQ9Y6D0 94 aa11.48□□□□□ -0.57
SDC3-203ENST00000471567 IGHV3-49A0A0A0MS15 119 aa11.47□□□□□ -0.57
SDC3-203ENST00000471567 FNDC10F2Z333 226 aa11.47□□□□□ -0.57
SDC3-203ENST00000471567 GOSR2O14653 212 aa11.47□□□□□ -0.57
SDC3-203ENST00000471567 METTL15P1P0C7V9 234 aa11.47□□□□□ -0.57
SDC3-203ENST00000471567 PSG1P11464 419 aa11.47□□□□□ -0.57
SDC3-203ENST00000471567 CD81P60033 236 aa11.47□□□□□ -0.57
SDC3-203ENST00000471567 DLK1P80370 383 aa11.47□□□□□ -0.57
SDC3-203ENST00000471567 CYCSP99999 105 aaKnown RBP11.47□□□□□ -0.57
SDC3-203ENST00000471567 OR8G2PQ6IF36 304 aa11.47□□□□□ -0.57
SDC3-203ENST00000471567 TMEM144Q7Z5S9 345 aa11.47□□□□□ -0.57
SDC3-203ENST00000471567 OR10P1Q8NGE3 313 aa11.47□□□□□ -0.57
SDC3-203ENST00000471567 OR51G1Q8NGK1 321 aa11.47□□□□□ -0.57
SDC3-203ENST00000471567 NARS2Q96I59 477 aaKnown RBP11.47□□□□□ -0.57
SDC3-203ENST00000471567 RNF2Q99496 336 aa11.47□□□□□ -0.57
SDC3-203ENST00000471567 NMES1Q9C002 83 aa11.47□□□□□ -0.57
SDC3-203ENST00000471567 C11orf1Q9H5F2 150 aa11.47□□□□□ -0.57
SDC3-203ENST00000471567 SSNA1O43805 119 aa11.46□□□□□ -0.57
SDC3-203ENST00000471567 CFDP00746 253 aaPredicted RBP11.46□□□□□ -0.57
SDC3-203ENST00000471567 APOHP02749 345 aaPredicted RBP11.46□□□□□ -0.57
SDC3-203ENST00000471567 IL4P05112 153 aa11.46□□□□□ -0.57
SDC3-203ENST00000471567 HNRNPCP07910 306 aaKnown RBP eCLIP11.46□□□□□ -0.57
SDC3-203ENST00000471567 CD7P09564 240 aa11.46□□□□□ -0.57
SDC3-203ENST00000471567 IGHV4-30-4P0DP06 118 aa11.46□□□□□ -0.57
SDC3-203ENST00000471567 RAB32Q13637 225 aa11.46□□□□□ -0.57
SDC3-203ENST00000471567 FAM90A2PQ658T7 463 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms