RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 IFNA21P01568 189 aa6.58□□□□□ -1.36
CPSF4-211ENST00000471455 GIG44P09565 113 aaPredicted RBP6.58□□□□□ -1.36
CPSF4-211ENST00000471455 CRYBB3P26998 211 aa6.58□□□□□ -1.36
CPSF4-211ENST00000471455 HLA-DMAP28067 261 aa6.58□□□□□ -1.36
CPSF4-211ENST00000471455 UCP3P55916 312 aa6.58□□□□□ -1.36
CPSF4-211ENST00000471455 DHRS2Q13268 280 aa6.58□□□□□ -1.36
CPSF4-211ENST00000471455 LGALS9BQ3B8N2 356 aa6.58□□□□□ -1.36
CPSF4-211ENST00000471455 LILRB2Q8N423 598 aa6.58□□□□□ -1.36
CPSF4-211ENST00000471455 SAMD12Q8N8I0 201 aa6.58□□□□□ -1.36
CPSF4-211ENST00000471455 OR4X1Q8NH49 305 aa6.58□□□□□ -1.36
CPSF4-211ENST00000471455 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
CPSF4-211ENST00000471455 SCPEP1Q9HB40 452 aa6.58□□□□□ -1.36
CPSF4-211ENST00000471455 SEPSECSQ9HD40 501 aaKnown RBP6.58□□□□□ -1.36
CPSF4-211ENST00000471455 MUC4Q99102 2169 aa6.58□□□□□ -1.36
CPSF4-211ENST00000471455 A0A1B0GU03 582 aa6.57□□□□□ -1.36
CPSF4-211ENST00000471455 SMIM31A0A1B0GVY4 71 aa6.57□□□□□ -1.36
CPSF4-211ENST00000471455 ANKRD65E5RJM6 399 aa6.57□□□□□ -1.36
CPSF4-211ENST00000471455 GSTZ1O43708 216 aaPredicted RBP6.57□□□□□ -1.36
CPSF4-211ENST00000471455 SPART-AS1P0CW21 52 aa6.57□□□□□ -1.36
CPSF4-211ENST00000471455 RCVRNP35243 200 aa6.57□□□□□ -1.36
CPSF4-211ENST00000471455 NUP62P37198 522 aaPredicted RBP6.57□□□□□ -1.36
CPSF4-211ENST00000471455 RPL5P46777 297 aaKnown RBP6.57□□□□□ -1.36
CPSF4-211ENST00000471455 KRTAP10-2P60368 255 aa6.57□□□□□ -1.36
CPSF4-211ENST00000471455 C12orf74Q32Q52 190 aa6.57□□□□□ -1.36
CPSF4-211ENST00000471455 PSMG4Q5JS54 123 aa6.57□□□□□ -1.36
CPSF4-211ENST00000471455 RNASE11Q8TAA1 199 aaKnown RBP6.57□□□□□ -1.36
CPSF4-211ENST00000471455 DCANP1Q8TF63 244 aa6.57□□□□□ -1.36
CPSF4-211ENST00000471455 ZNF486Q96H40 463 aaPredicted RBP6.57□□□□□ -1.36
CPSF4-211ENST00000471455 CLEC5AQ9NY25 188 aa6.57□□□□□ -1.36
CPSF4-211ENST00000471455 PFDN2Q9UHV9 154 aa6.57□□□□□ -1.36
CPSF4-211ENST00000471455 DNAH11Q96DT5 4516 aa6.56□□□□□ -1.36
CPSF4-211ENST00000471455 SMIM9A6NGZ8 99 aa6.56□□□□□ -1.36
CPSF4-211ENST00000471455 IGKV1-39P01597 117 aa6.56□□□□□ -1.36
CPSF4-211ENST00000471455 IGKV1D-39P04432 117 aa6.56□□□□□ -1.36
CPSF4-211ENST00000471455 HNRNPCP07910 306 aaKnown RBP eCLIP6.56□□□□□ -1.36
CPSF4-211ENST00000471455 RNASE2P10153 161 aaKnown RBP6.56□□□□□ -1.36
CPSF4-211ENST00000471455 PGAM2P15259 253 aa6.56□□□□□ -1.36
CPSF4-211ENST00000471455 RND3P61587 244 aa6.56□□□□□ -1.36
CPSF4-211ENST00000471455 TRIM16LQ309B1 348 aa6.56□□□□□ -1.36
CPSF4-211ENST00000471455 SPINK9Q5DT21 86 aa6.56□□□□□ -1.36
CPSF4-211ENST00000471455 CSNK1G2-AS1Q8NCQ2 148 aa6.56□□□□□ -1.36
CPSF4-211ENST00000471455 OR1S2Q8NGQ3 325 aa6.56□□□□□ -1.36
CPSF4-211ENST00000471455 Q8WTZ3 238 aa6.56□□□□□ -1.36
CPSF4-211ENST00000471455 RRNAD1Q96FB5 475 aaKnown RBP6.56□□□□□ -1.36
CPSF4-211ENST00000471455 RAB40CQ96S21 281 aa6.56□□□□□ -1.36
CPSF4-211ENST00000471455 RNF167Q9H6Y7 350 aa6.56□□□□□ -1.36
CPSF4-211ENST00000471455 CELA1Q9UNI1 258 aa6.56□□□□□ -1.36
CPSF4-211ENST00000471455 AGRNO00468 2067 aa6.56□□□□□ -1.36
CPSF4-211ENST00000471455 M0R2N4 97 aa6.55□□□□□ -1.36
CPSF4-211ENST00000471455 RTL8CO15255 209 aa6.55□□□□□ -1.36
CPSF4-211ENST00000471455 B3GALNT1O75752 331 aa6.55□□□□□ -1.36
CPSF4-211ENST00000471455 SLC25A4P12235 298 aa6.55□□□□□ -1.36
CPSF4-211ENST00000471455 HTR2BP41595 481 aa6.55□□□□□ -1.36
CPSF4-211ENST00000471455 PPP5CP53041 499 aa6.55□□□□□ -1.36
CPSF4-211ENST00000471455 NEDD8Q15843 81 aa6.55□□□□□ -1.36
CPSF4-211ENST00000471455 ETFRF1Q6IPR1 90 aa6.55□□□□□ -1.36
CPSF4-211ENST00000471455 CCDC71LQ8N9Z2 235 aa6.55□□□□□ -1.36
CPSF4-211ENST00000471455 GPX8Q8TED1 209 aa6.55□□□□□ -1.36
CPSF4-211ENST00000471455 NEU1Q99519 415 aa6.55□□□□□ -1.36
CPSF4-211ENST00000471455 NRN1Q9NPD7 142 aa6.55□□□□□ -1.36
CPSF4-211ENST00000471455 CACFD1Q9UGQ2 172 aa6.55□□□□□ -1.36
CPSF4-211ENST00000471455 RFNGQ9Y644 331 aa6.55□□□□□ -1.36
CPSF4-211ENST00000471455 PKHD1P08F94 4074 aa6.55□□□□□ -1.36
CPSF4-211ENST00000471455 FAT2Q9NYQ8 4349 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 FAM90A26D6RGX4 464 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 IGKV1-17P01599 117 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 IGKV1-5P01602 117 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 CD74P04233 296 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 TBPP20226 339 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 ETV6P41212 452 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 PIGPP57054 158 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 YPEL3P61236 119 aaPredicted RBP6.54□□□□□ -1.36
CPSF4-211ENST00000471455 TIGITQ495A1 244 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 RNF212Q495C1 297 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 TEPPQ6URK8 271 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 C16orf54Q6UWD8 224 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 ZNF767PQ75MW2 155 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 NOXA1Q86UR1 476 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 LYSMD2Q8IV50 215 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 FAM219AQ8IW50 185 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 ARRDC1Q8N5I2 433 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 RNASEH2CQ8TDP1 164 aaKnown RBP6.54□□□□□ -1.36
CPSF4-211ENST00000471455 GLMPQ8WWB7 406 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 VCX3AQ9NNX9 186 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 COPZ2Q9P299 210 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 XCL2Q9UBD3 114 aa6.54□□□□□ -1.36
CPSF4-211ENST00000471455 DNAH17Q9UFH2 4485 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 A0A0B4J293 547 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 C3orf85A0A1B0GTC6 90 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 H3BMM0 161 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 APOA1P02647 267 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 IL4P05112 153 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 P0C879 139 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 IGLC1P0CG04 106 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 HLA-DRB4P13762 266 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 OR10J1P30954 320 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 NKX2-1P43699 371 aaPredicted RBP6.53□□□□□ -1.36
CPSF4-211ENST00000471455 EMP1P54849 157 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 FAM3BP58499 235 aaPredicted RBP6.53□□□□□ -1.36
CPSF4-211ENST00000471455 SPCS3P61009 180 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms