RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 COL4A2P08572 1712 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 TRAV24A0A0B4J272 114 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 FAM90A27PA6NNH2 459 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 DEFB108AA8MXU0 73 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 VWC2LB2RUY7 222 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 SYNGR3O43761 229 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 IGLV2-8P01709 118 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 ID1P41134 155 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 FAM27BQ5VT28 67 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 TMEM42Q69YG0 159 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 SFTA2Q6UW10 78 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 LCNL1Q6ZST4 164 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 FOXL2NBQ6ZUU3 175 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 FGFBP3Q8TAT2 258 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 OSR1Q8TAX0 266 aaPredicted RBP3.46□□□□□ -1.86
VPS50-210ENST00000471188 GPR82Q96P67 336 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 NABP2Q9BQ15 211 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 TTTY13Q9BZ97 58 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 CHRNA10Q9GZZ6 450 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 ENY2Q9NPA8 101 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 INSIG2Q9Y5U4 225 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 AGRNO00468 2067 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 HCFC1P51610 2035 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 VPS13AQ96RL7 3174 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 SVILO95425 2214 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 TNCP24821 2201 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 TRBV20-1A0A075B6N2 111 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 IGHV3-43A0A0B4J1X8 118 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 IGHV5-51A0A0C4DH38 117 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 KIR2DS5A0A0G2JLQ3 304 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 A0A0G2JNG1 304 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 PRSS29PA6NIE9 313 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 J3KRW8 73 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 KIR2DS3K7RE56 304 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 FCGR3BO75015 233 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 CRYGCP07315 174 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 IGHV3-43DP0DP04 118 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 FGF6P10767 208 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 GABRG2P18507 467 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 CRYGSP22914 178 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 SUMO3P55854 103 aaPredicted RBP3.46□□□□□ -1.86
VPS50-210ENST00000471188 KIR2DS5Q14953 304 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 ZFAND6Q6FIF0 208 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 TMEM178AQ8NBL3 297 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 GTSF1Q8WW33 167 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 GLMPQ8WWB7 406 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 ZNF747Q9BV97 191 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 FER1L5A0AVI2 2057 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 PLCE1Q9P212 2302 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 TRAV5A0A0B4J249 113 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 P01737 135 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 XGP55808 180 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 ERVK-16P61578 105 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 TFF2Q03403 129 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 C10orf128Q5T292 105 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 FAM214BQ7L5A3 538 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 YAF2Q8IY57 180 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 TTC9CQ8N5M4 171 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 RFESDQ8TAC1 157 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 DDB2Q92466 427 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 HARBI1Q96MB7 349 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 TAAR6Q96RI8 345 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 FAM110AQ9BQ89 295 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 TMEM140Q9NV12 185 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 FZR1Q9UM11 496 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 TMSB15BA0A087X1C1 80 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 NPIPB5A8MRT5 1133 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.45□□□□□ -1.86
VPS50-210ENST00000471188 IGHV3-13P01766 116 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 ACP1P24666 158 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 GNG5P63218 68 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 SRSF6Q13247 344 aaKnown RBP3.45□□□□□ -1.86
VPS50-210ENST00000471188 GAB4Q2WGN9 574 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 Q6ZS46 218 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 Q6ZUT4 128 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 ATP5L2Q7Z4Y8 100 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 GCSAMQ8N6F7 178 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 OR10X1Q8NGY0 326 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 ZNF414Q96IQ9 312 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 PRELID3AQ96N28 172 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 C18orf15Q96N68 181 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 YAE1D1Q9NRH1 226 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 NCKAP5O14513 1909 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 FREM1Q5H8C1 2179 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 MGST3O14880 152 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 BRI3O95415 125 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 NGFP01138 241 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 FOXI1Q12951 378 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 RUNX3Q13761 415 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 MBNL2Q5VZF2 373 aaKnown RBP3.45□□□□□ -1.86
VPS50-210ENST00000471188 COLCA1Q6ZS62 124 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 Q6ZSR3 168 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 YRDCQ86U90 279 aaKnown RBP3.45□□□□□ -1.86
VPS50-210ENST00000471188 MBD6Q96DN6 1003 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 IGF2BP2-AS1Q96M15 143 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 FOXB1Q99853 325 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 RPP25Q9BUL9 199 aaKnown RBP3.45□□□□□ -1.86
VPS50-210ENST00000471188 CHAC1Q9BUX1 264 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 ZNF576Q9H609 170 aa3.45□□□□□ -1.86
VPS50-210ENST00000471188 LOXL2Q9Y4K0 774 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms