RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 TIGITQ495A1 244 aa10.56□□□□□ -0.72
TOP3B-215ENST00000470338 FAM90A2PQ658T7 463 aa10.56□□□□□ -0.72
TOP3B-215ENST00000470338 OR1S2Q8NGQ3 325 aa10.56□□□□□ -0.72
TOP3B-215ENST00000470338 VSIRQ9H7M9 311 aa10.56□□□□□ -0.72
TOP3B-215ENST00000470338 SRD5A3Q9H8P0 318 aa10.56□□□□□ -0.72
TOP3B-215ENST00000470338 IGHV3-49A0A0A0MS15 119 aa10.55□□□□□ -0.72
TOP3B-215ENST00000470338 MED6O75586 246 aa10.55□□□□□ -0.72
TOP3B-215ENST00000470338 ADAP1O75689 374 aa10.55□□□□□ -0.72
TOP3B-215ENST00000470338 CD5P06127 495 aa10.55□□□□□ -0.72
TOP3B-215ENST00000470338 YPEL3P61236 119 aaPredicted RBP10.55□□□□□ -0.72
TOP3B-215ENST00000470338 COQ8AQ8NI60 647 aa10.55□□□□□ -0.72
TOP3B-215ENST00000470338 S100ZQ8WXG8 99 aa10.55□□□□□ -0.72
TOP3B-215ENST00000470338 DNAH7Q8WXX0 4024 aa10.55□□□□□ -0.72
TOP3B-215ENST00000470338 IGHV3OR16-13A0A075B7E8 117 aa10.54□□□□□ -0.72
TOP3B-215ENST00000470338 IGHV3-74A0A0B4J1X5 117 aa10.54□□□□□ -0.72
TOP3B-215ENST00000470338 OR4C46A6NHA9 309 aa10.54□□□□□ -0.72
TOP3B-215ENST00000470338 SYNGR2O43760 224 aa10.54□□□□□ -0.72
TOP3B-215ENST00000470338 APOHP02749 345 aaPredicted RBP10.54□□□□□ -0.72
TOP3B-215ENST00000470338 TCRBP04435 133 aa10.54□□□□□ -0.72
TOP3B-215ENST00000470338 IFNA4P05014 189 aa10.54□□□□□ -0.72
TOP3B-215ENST00000470338 NPPCP23582 126 aa10.54□□□□□ -0.72
TOP3B-215ENST00000470338 OR10J1P30954 320 aa10.54□□□□□ -0.72
TOP3B-215ENST00000470338 BMI1P35226 326 aa10.54□□□□□ -0.72
TOP3B-215ENST00000470338 GPX4P36969 197 aaPredicted RBP10.54□□□□□ -0.72
TOP3B-215ENST00000470338 C4orf46Q504U0 113 aa10.54□□□□□ -0.72
TOP3B-215ENST00000470338 LILRB2Q8N423 598 aa10.54□□□□□ -0.72
TOP3B-215ENST00000470338 ST8SIA2Q92186 375 aa10.54□□□□□ -0.72
TOP3B-215ENST00000470338 NPIPB3Q92617 1050 aa10.54□□□□□ -0.72
TOP3B-215ENST00000470338 CIB3Q96Q77 187 aaPredicted RBP10.54□□□□□ -0.72
TOP3B-215ENST00000470338 FAM110AQ9BQ89 295 aa10.54□□□□□ -0.72
TOP3B-215ENST00000470338 SPATA25Q9BR10 227 aa10.54□□□□□ -0.72
TOP3B-215ENST00000470338 MPTX1A8MV57 137 aa10.53□□□□□ -0.72
TOP3B-215ENST00000470338 IAPPP10997 89 aa10.53□□□□□ -0.72
TOP3B-215ENST00000470338 CRYBB3P26998 211 aa10.53□□□□□ -0.72
TOP3B-215ENST00000470338 ID3Q02535 119 aa10.53□□□□□ -0.72
TOP3B-215ENST00000470338 ODF3L2Q3SX64 289 aa10.53□□□□□ -0.72
TOP3B-215ENST00000470338 Q8WTZ3 238 aa10.53□□□□□ -0.72
TOP3B-215ENST00000470338 MITD1Q8WV92 249 aa10.53□□□□□ -0.72
TOP3B-215ENST00000470338 CITED4Q96RK1 184 aa10.53□□□□□ -0.72
TOP3B-215ENST00000470338 MAGT1Q9H0U3 335 aa10.53□□□□□ -0.72
TOP3B-215ENST00000470338 C20orf85Q9H1P6 137 aa10.53□□□□□ -0.72
TOP3B-215ENST00000470338 PTTG2Q9NZH5 202 aa10.53□□□□□ -0.72
TOP3B-215ENST00000470338 IFNA21P01568 189 aa10.52□□□□□ -0.73
TOP3B-215ENST00000470338 RAB11AP62491 216 aa10.52□□□□□ -0.73
TOP3B-215ENST00000470338 GAMTQ14353 236 aa10.52□□□□□ -0.73
TOP3B-215ENST00000470338 TCF24Q7RTU0 167 aa10.52□□□□□ -0.73
TOP3B-215ENST00000470338 OR4D5Q8NGN0 318 aa10.52□□□□□ -0.73
TOP3B-215ENST00000470338 ACY3Q96HD9 319 aa10.52□□□□□ -0.73
TOP3B-215ENST00000470338 METTL26Q96S19 204 aa10.52□□□□□ -0.73
TOP3B-215ENST00000470338 TMEM231Q9H6L2 316 aa10.52□□□□□ -0.73
TOP3B-215ENST00000470338 UBQLN2Q9UHD9 624 aa10.52□□□□□ -0.73
TOP3B-215ENST00000470338 U3KQE9 123 aa10.52□□□□□ -0.73
TOP3B-215ENST00000470338 A0A1W2PS18 150 aa10.51□□□□□ -0.73
TOP3B-215ENST00000470338 WRBO00258 174 aa10.51□□□□□ -0.73
TOP3B-215ENST00000470338 DFFBO76075 338 aa10.51□□□□□ -0.73
TOP3B-215ENST00000470338 TOMM40O96008 361 aa10.51□□□□□ -0.73
TOP3B-215ENST00000470338 RPP30P78346 268 aaKnown RBP10.51□□□□□ -0.73
TOP3B-215ENST00000470338 TBC1D24Q9ULP9 559 aa10.51□□□□□ -0.73
TOP3B-215ENST00000470338 IGKV1D-37A0A075B6S9 117 aa10.5□□□□□ -0.73
TOP3B-215ENST00000470338 TRAV6A0A075B6T7 132 aa10.5□□□□□ -0.73
TOP3B-215ENST00000470338 LOC102724200A0A096LPH7 203 aaPredicted RBP10.5□□□□□ -0.73
TOP3B-215ENST00000470338 TRAV2A0A0B4J234 112 aa10.5□□□□□ -0.73
TOP3B-215ENST00000470338 IGHV3-66A0A0C4DH42 116 aa10.5□□□□□ -0.73
TOP3B-215ENST00000470338 PRSS46E5RG02 174 aa10.5□□□□□ -0.73
TOP3B-215ENST00000470338 RD3LP0DJH9 198 aa10.5□□□□□ -0.73
TOP3B-215ENST00000470338 NKX2-1P43699 371 aaPredicted RBP10.5□□□□□ -0.73
TOP3B-215ENST00000470338 CMC4P56277 68 aaPredicted RBP10.5□□□□□ -0.73
TOP3B-215ENST00000470338 PAFAH1B2P68402 229 aa10.5□□□□□ -0.73
TOP3B-215ENST00000470338 ASAH1Q13510 395 aa10.5□□□□□ -0.73
TOP3B-215ENST00000470338 SLC35E1Q96K37 410 aa10.5□□□□□ -0.73
TOP3B-215ENST00000470338 GGTLC1Q9BX51 225 aa10.5□□□□□ -0.73
TOP3B-215ENST00000470338 MS4A6AQ9H2W1 248 aa10.5□□□□□ -0.73
TOP3B-215ENST00000470338 NUDT15Q9NV35 164 aa10.5□□□□□ -0.73
TOP3B-215ENST00000470338 IGKV3-7A0A075B6H7 116 aa10.49□□□□□ -0.73
TOP3B-215ENST00000470338 FAM240BA0A1B0GVZ2 78 aa10.49□□□□□ -0.73
TOP3B-215ENST00000470338 IL4P05112 153 aa10.49□□□□□ -0.73
TOP3B-215ENST00000470338 HNRNPCP07910 306 aaKnown RBP eCLIP10.49□□□□□ -0.73
TOP3B-215ENST00000470338 PSG1P11464 419 aa10.49□□□□□ -0.73
TOP3B-215ENST00000470338 TFPI2P48307 235 aa10.49□□□□□ -0.73
TOP3B-215ENST00000470338 POLR2GP62487 172 aaKnown RBP eCLIP10.49□□□□□ -0.73
TOP3B-215ENST00000470338 ZNF846Q147U1 533 aa10.49□□□□□ -0.73
TOP3B-215ENST00000470338 USF2Q15853 346 aaPredicted RBP10.49□□□□□ -0.73
TOP3B-215ENST00000470338 MZT2BQ6NZ67 158 aa10.49□□□□□ -0.73
TOP3B-215ENST00000470338 GBGT1Q8N5D6 347 aa10.49□□□□□ -0.73
TOP3B-215ENST00000470338 NARS2Q96I59 477 aaKnown RBP10.49□□□□□ -0.73
TOP3B-215ENST00000470338 WDR12Q9GZL7 423 aaKnown RBP10.49□□□□□ -0.73
TOP3B-215ENST00000470338 UPK1BO75841 260 aa10.48□□□□□ -0.73
TOP3B-215ENST00000470338 H2AFB2P0C5Z0 115 aa10.48□□□□□ -0.73
TOP3B-215ENST00000470338 P2RY1P47900 373 aa10.48□□□□□ -0.73
TOP3B-215ENST00000470338 IAH1Q2TAA2 248 aaPredicted RBP10.48□□□□□ -0.73
TOP3B-215ENST00000470338 SPANXN5Q5MJ07 72 aa10.48□□□□□ -0.73
TOP3B-215ENST00000470338 C16orf54Q6UWD8 224 aa10.48□□□□□ -0.73
TOP3B-215ENST00000470338 ZBTB8BQ8NAP8 495 aaPredicted RBP10.48□□□□□ -0.73
TOP3B-215ENST00000470338 OR51G1Q8NGK1 321 aa10.48□□□□□ -0.73
TOP3B-215ENST00000470338 ZNF431Q8TF32 576 aaPredicted RBP10.48□□□□□ -0.73
TOP3B-215ENST00000470338 GRAMD2BQ96HH9 432 aa10.48□□□□□ -0.73
TOP3B-215ENST00000470338 SMIM8Q96KF7 97 aa10.48□□□□□ -0.73
TOP3B-215ENST00000470338 EDA2RQ9HAV5 297 aa10.48□□□□□ -0.73
TOP3B-215ENST00000470338 RETNQ9HD89 108 aa10.48□□□□□ -0.73
TOP3B-215ENST00000470338 PAIP2BQ9ULR5 123 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms