RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 RAB14P61106 215 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 CYCSP99999 105 aaKnown RBP3.7□□□□□ -1.82
SF3B1-208ENST00000470268 PRCDQ00LT1 54 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 AKR1C1Q04828 323 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 SCGB2A2Q13296 93 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 CLINT1Q14677 625 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 C9orf152Q5JTZ5 239 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 Q6ZSV7 163 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 LFNGQ8NES3 379 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 OR5B3Q8NH48 314 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 OR52E5Q8NH55 327 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 TMEM170AQ8WVE7 144 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 NOL4LQ96MY1 436 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-208ENST00000470268 LINC00052Q96N35 136 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 AQP10Q96PS8 301 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 SPIN2AQ99865 258 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 SPIN2BQ9BPZ2 258 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 ELOVL1Q9BW60 279 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 HINT2Q9BX68 163 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 COMMD5Q9GZQ3 224 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 SH3BGRL3Q9H299 93 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 RBKSQ9H477 322 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 ZNF257Q9Y2Q1 563 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 DMRT1Q9Y5R6 373 aa3.7□□□□□ -1.82
SF3B1-208ENST00000470268 TEP1Q99973 2627 aaKnown RBP3.69□□□□□ -1.82
SF3B1-208ENST00000470268 PIGBOS1A0A0B4J2F0 54 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 MFSD2BA6NFX1 497 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 HSBP1L1C9JCN9 74 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 M0QZK8 103 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 WRBO00258 174 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 NUPL2O15504 423 aaKnown RBP3.69□□□□□ -1.82
SF3B1-208ENST00000470268 TCF21O43680 179 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 SYNGR2O43760 224 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 EIF3GO75821 320 aaKnown RBP eCLIP3.69□□□□□ -1.82
SF3B1-208ENST00000470268 JTBO76095 146 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 CNIH1O95406 144 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 IGF1P05019 195 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 MAS1LP35410 378 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 NUP62P37198 522 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-208ENST00000470268 RPL35P42766 123 aaKnown RBP3.69□□□□□ -1.82
SF3B1-208ENST00000470268 HOXA1P49639 335 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-208ENST00000470268 CAV2P51636 162 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 MFAP2P55001 183 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 SPCS3P61009 180 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 FLI1Q01543 452 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-208ENST00000470268 TMEM267Q0VDI3 215 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-208ENST00000470268 TMEM88Q6PEY1 159 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 C10orf99Q6UWK7 81 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 SLC35E3Q7Z769 313 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 PRIMA1Q86XR5 153 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 STX12Q86Y82 276 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 Q8N2B8 174 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 STPG2Q8N412 459 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 TMEM217Q8N7C4 229 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 OR1S2Q8NGQ3 325 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 OR1L8Q8NGR8 309 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 SGMS2Q8NHU3 365 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 DTD1Q8TEA8 209 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 ARPC1AQ92747 370 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 DAZAP1Q96EP5 407 aaKnown RBP3.69□□□□□ -1.82
SF3B1-208ENST00000470268 C12orf57Q99622 126 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 PARP11Q9NR21 331 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 WSB1Q9Y6I7 421 aa3.69□□□□□ -1.82
SF3B1-208ENST00000470268 A0A1B0GV50 99 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 CEBPZOSA8MTT3 80 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 FAM90A26D6RGX4 464 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 INS-IGF2F8WCM5 200 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 PLXNB1O43157 2135 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 PRH1P02810 166 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 OR13C7P0DN81 318 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 BMI1P35226 326 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 AKR1D1P51857 326 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 CRIP2P52943 208 aaPredicted RBP3.68□□□□□ -1.82
SF3B1-208ENST00000470268 EWSR1Q01844 656 aaKnown RBP eCLIP3.68□□□□□ -1.82
SF3B1-208ENST00000470268 ARL16Q0P5N6 197 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 ECSCRQ19T08 205 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 BSXQ3C1V8 233 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 ZNF329Q86UD4 541 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 BAP18Q8IXM2 172 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 HSD17B11Q8NBQ5 300 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 ATP6V0BQ99437 205 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 NPFFR1Q9GZQ6 430 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 TMEM231Q9H6L2 316 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 FKBP11Q9NYL4 201 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 NIPBLQ6KC79 2804 aaeCLIP3.68□□□□□ -1.82
SF3B1-208ENST00000470268 TNCP24821 2201 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 NF1P21359 2839 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 C15orf62A8K5M9 175 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 PMS2P5A8MQ11 134 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 E5RGE8 158 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 F8W036 122 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 AGPAT2O15120 278 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 CRYGCP07315 174 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 RNASE2P10153 161 aaKnown RBP3.68□□□□□ -1.82
SF3B1-208ENST00000470268 TPT1P13693 172 aaKnown RBP3.68□□□□□ -1.82
SF3B1-208ENST00000470268 C4BPBP20851 252 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 RUNX1Q01196 453 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 DEFA5Q01523 94 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 AKIRIN2Q53H80 203 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 HIST2H2BDQ6DRA6 164 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms