RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 CD33P20138 364 aa8.06□□□□□ -1.12
SMC1A-206ENST00000470241 OR10J1P30954 320 aa8.06□□□□□ -1.12
SMC1A-206ENST00000470241 SULT1A1P50225 295 aa8.06□□□□□ -1.12
SMC1A-206ENST00000470241 DLK1P80370 383 aa8.06□□□□□ -1.12
SMC1A-206ENST00000470241 EWSR1Q01844 656 aaKnown RBP eCLIP8.06□□□□□ -1.12
SMC1A-206ENST00000470241 REC114Q7Z4M0 266 aa8.06□□□□□ -1.12
SMC1A-206ENST00000470241 TMEM217Q8N7C4 229 aa8.06□□□□□ -1.12
SMC1A-206ENST00000470241 THAP8Q8NA92 274 aa8.06□□□□□ -1.12
SMC1A-206ENST00000470241 OR1S2Q8NGQ3 325 aa8.06□□□□□ -1.12
SMC1A-206ENST00000470241 OR2T35Q8NGX2 323 aa8.06□□□□□ -1.12
SMC1A-206ENST00000470241 WNK1Q9H4A3 2382 aa8.06□□□□□ -1.12
SMC1A-206ENST00000470241 hCG_2014768A0A024R1R8 64 aa8.05□□□□□ -1.12
SMC1A-206ENST00000470241 IGKV1OR2-108A0A075B7D4 117 aa8.05□□□□□ -1.12
SMC1A-206ENST00000470241 FNDC10F2Z333 226 aa8.05□□□□□ -1.12
SMC1A-206ENST00000470241 LGALS9O00182 355 aa8.05□□□□□ -1.12
SMC1A-206ENST00000470241 NDUFA4O00483 81 aa8.05□□□□□ -1.12
SMC1A-206ENST00000470241 NHLH2Q02577 135 aa8.05□□□□□ -1.12
SMC1A-206ENST00000470241 RELQ04864 619 aaPredicted RBP8.05□□□□□ -1.12
SMC1A-206ENST00000470241 FGL1Q08830 312 aa8.05□□□□□ -1.12
SMC1A-206ENST00000470241 SLC38A11Q08AI6 406 aa8.05□□□□□ -1.12
SMC1A-206ENST00000470241 FAM106AQ4KMX7 169 aa8.05□□□□□ -1.12
SMC1A-206ENST00000470241 IL34Q6ZMJ4 242 aa8.05□□□□□ -1.12
SMC1A-206ENST00000470241 ZNF600Q6ZNG1 722 aa8.05□□□□□ -1.12
SMC1A-206ENST00000470241 STX12Q86Y82 276 aa8.05□□□□□ -1.12
SMC1A-206ENST00000470241 OR9G4Q8NGQ1 327 aa8.05□□□□□ -1.12
SMC1A-206ENST00000470241 THAP6Q8TBB0 222 aa8.05□□□□□ -1.12
SMC1A-206ENST00000470241 TMEM190Q8WZ59 177 aa8.05□□□□□ -1.12
SMC1A-206ENST00000470241 RCC1LQ96I51 464 aaKnown RBP8.05□□□□□ -1.12
SMC1A-206ENST00000470241 GGACTQ9BVM4 153 aa8.05□□□□□ -1.12
SMC1A-206ENST00000470241 SLC25A31Q9H0C2 315 aa8.05□□□□□ -1.12
SMC1A-206ENST00000470241 IGHV3OR16-8A0A075B7F1 116 aa8.04□□□□□ -1.12
SMC1A-206ENST00000470241 ZNF320A2RRD8 509 aa8.04□□□□□ -1.12
SMC1A-206ENST00000470241 TMEM213A2RRL7 107 aa8.04□□□□□ -1.12
SMC1A-206ENST00000470241 SMCO3A2RU48 225 aa8.04□□□□□ -1.12
SMC1A-206ENST00000470241 SMLR1H3BR10 107 aa8.04□□□□□ -1.12
SMC1A-206ENST00000470241 SCAF4O95104 1147 aaKnown RBP8.04□□□□□ -1.12
SMC1A-206ENST00000470241 CSN3P07498 182 aa8.04□□□□□ -1.12
SMC1A-206ENST00000470241 IGLL1P15814 213 aa8.04□□□□□ -1.12
SMC1A-206ENST00000470241 EDN2P20800 178 aa8.04□□□□□ -1.12
SMC1A-206ENST00000470241 S100A11P31949 105 aa8.04□□□□□ -1.12
SMC1A-206ENST00000470241 YPEL3P61236 119 aaPredicted RBP8.04□□□□□ -1.12
SMC1A-206ENST00000470241 ZNF90Q03938 601 aa8.04□□□□□ -1.12
SMC1A-206ENST00000470241 AKR1C1Q04828 323 aa8.04□□□□□ -1.12
SMC1A-206ENST00000470241 BAXQ07812 192 aa8.04□□□□□ -1.12
SMC1A-206ENST00000470241 VWC2Q2TAL6 325 aa8.04□□□□□ -1.12
SMC1A-206ENST00000470241 TOMM20LQ6UXN7 152 aa8.04□□□□□ -1.12
SMC1A-206ENST00000470241 ADAMTSL5Q6ZMM2 481 aa8.04□□□□□ -1.12
SMC1A-206ENST00000470241 TMEM144Q7Z5S9 345 aa8.04□□□□□ -1.12
SMC1A-206ENST00000470241 TRGV9Q99603 122 aa8.04□□□□□ -1.12
SMC1A-206ENST00000470241 ZFAND3Q9H8U3 227 aa8.04□□□□□ -1.12
SMC1A-206ENST00000470241 PUS1Q9Y606 427 aaKnown RBP eCLIP8.04□□□□□ -1.12
SMC1A-206ENST00000470241 ZFP92A6NM28 416 aa8.03□□□□□ -1.12
SMC1A-206ENST00000470241 A8MWP6 167 aa8.03□□□□□ -1.12
SMC1A-206ENST00000470241 SEC14L6B5MCN3 397 aa8.03□□□□□ -1.12
SMC1A-206ENST00000470241 SCGB2A1O75556 95 aa8.03□□□□□ -1.12
SMC1A-206ENST00000470241 YIF1AO95070 293 aa8.03□□□□□ -1.12
SMC1A-206ENST00000470241 TOMM40O96008 361 aa8.03□□□□□ -1.12
SMC1A-206ENST00000470241 PSG1P11464 419 aa8.03□□□□□ -1.12
SMC1A-206ENST00000470241 RPL12P30050 165 aaKnown RBP8.03□□□□□ -1.12
SMC1A-206ENST00000470241 HBG1P69891 147 aa8.03□□□□□ -1.12
SMC1A-206ENST00000470241 HBG2P69892 147 aa8.03□□□□□ -1.12
SMC1A-206ENST00000470241 TM4SF20Q53R12 229 aa8.03□□□□□ -1.12
SMC1A-206ENST00000470241 OR5C1Q8NGR4 320 aa8.03□□□□□ -1.12
SMC1A-206ENST00000470241 ST6GAL2Q96JF0 529 aa8.03□□□□□ -1.12
SMC1A-206ENST00000470241 MCRIP2Q9BUT9 160 aaKnown RBP8.03□□□□□ -1.12
SMC1A-206ENST00000470241 C20orf24Q9BUV8 137 aa8.03□□□□□ -1.12
SMC1A-206ENST00000470241 TMEM147Q9BVK8 224 aa8.03□□□□□ -1.12
SMC1A-206ENST00000470241 NPVFQ9HCQ7 196 aa8.03□□□□□ -1.12
SMC1A-206ENST00000470241 PEMTQ9UBM1 199 aa8.03□□□□□ -1.12
SMC1A-206ENST00000470241 UFC1Q9Y3C8 167 aa8.03□□□□□ -1.12
SMC1A-206ENST00000470241 LSM4Q9Y4Z0 139 aaKnown RBP8.03□□□□□ -1.12
SMC1A-206ENST00000470241 HSPB11Q9Y547 144 aa8.03□□□□□ -1.12
SMC1A-206ENST00000470241 VWFP04275 2813 aa8.02□□□□□ -1.12
SMC1A-206ENST00000470241 C2orf70A6NJV1 201 aa8.02□□□□□ -1.13
SMC1A-206ENST00000470241 K7EMT4 169 aa8.02□□□□□ -1.13
SMC1A-206ENST00000470241 ZNF207O43670 478 aaKnown RBP8.02□□□□□ -1.13
SMC1A-206ENST00000470241 RD3LP0DJH9 198 aa8.02□□□□□ -1.13
SMC1A-206ENST00000470241 ELLP55199 621 aaPredicted RBP8.02□□□□□ -1.13
SMC1A-206ENST00000470241 OR2F1Q13607 317 aa8.02□□□□□ -1.13
SMC1A-206ENST00000470241 ATP6V1FQ16864 119 aa8.02□□□□□ -1.13
SMC1A-206ENST00000470241 OXLD1Q5BKU9 147 aa8.02□□□□□ -1.13
SMC1A-206ENST00000470241 TMEM182Q6ZP80 229 aaPredicted RBP8.02□□□□□ -1.13
SMC1A-206ENST00000470241 LILRB2Q8N423 598 aa8.02□□□□□ -1.13
SMC1A-206ENST00000470241 Q8WTZ3 238 aa8.02□□□□□ -1.13
SMC1A-206ENST00000470241 AQP10Q96PS8 301 aa8.02□□□□□ -1.13
SMC1A-206ENST00000470241 ELOVL1Q9BW60 279 aa8.02□□□□□ -1.13
SMC1A-206ENST00000470241 UQCC1Q9NVA1 299 aa8.02□□□□□ -1.13
SMC1A-206ENST00000470241 FXYD6-FXYD2A0A087WZ82 144 aa8.01□□□□□ -1.13
SMC1A-206ENST00000470241 RNF222A6NCQ9 220 aa8.01□□□□□ -1.13
SMC1A-206ENST00000470241 G3V4G9 280 aa8.01□□□□□ -1.13
SMC1A-206ENST00000470241 SAP30O75446 220 aa8.01□□□□□ -1.13
SMC1A-206ENST00000470241 C8orf88P0DMB2 117 aa8.01□□□□□ -1.13
SMC1A-206ENST00000470241 FOLR2P14207 255 aa8.01□□□□□ -1.13
SMC1A-206ENST00000470241 CBLN1P23435 193 aa8.01□□□□□ -1.13
SMC1A-206ENST00000470241 GATA2P23769 480 aaPredicted RBP8.01□□□□□ -1.13
SMC1A-206ENST00000470241 CLINT1Q14677 625 aa8.01□□□□□ -1.13
SMC1A-206ENST00000470241 C9orf66Q5T8R8 295 aa8.01□□□□□ -1.13
SMC1A-206ENST00000470241 SAMD5Q5TGI4 173 aa8.01□□□□□ -1.13
SMC1A-206ENST00000470241 TEPPQ6URK8 271 aa8.01□□□□□ -1.13
SMC1A-206ENST00000470241 CYP2G1PQ6ZSU1 146 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 194.1 ms