RNA–Protein interactions for RNA: ENST00000470019.5

PTK7-208, Transcript of protein tyrosine kinase 7 (inactive), human

TSL 5

Gene PTK7, Length 4,016 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK7-208	ENST00000470019	OCC1	Q8TAD7	63 aa		12	□□□□□ -0.49
PTK7-208	ENST00000470019	TRAV20	A0A0B4J274	112 aa		12	□□□□□ -0.49
PTK7-208	ENST00000470019	NBR2	O15453	112 aa		12	□□□□□ -0.49
PTK7-208	ENST00000470019	AMT	P48728	403 aa		12	□□□□□ -0.49
PTK7-208	ENST00000470019	RNASEK	Q6P5S7	137 aa	Known RBP	12	□□□□□ -0.49
PTK7-208	ENST00000470019	BPESC1	Q9GZL8	116 aa		12	□□□□□ -0.49
PTK7-208	ENST00000470019	TRAV1-1	A0A0B4J248	108 aa		12	□□□□□ -0.49
PTK7-208	ENST00000470019	BUB1B-PAK6	H3BSN5	160 aa		12	□□□□□ -0.49
PTK7-208	ENST00000470019	PF4V1	P10720	104 aa		12	□□□□□ -0.49
PTK7-208	ENST00000470019	TEX36	Q5VZQ5	186 aa		12	□□□□□ -0.49
PTK7-208	ENST00000470019	FAM90A2P	Q658T7	463 aa		12	□□□□□ -0.49
PTK7-208	ENST00000470019	TOMM20L	Q6UXN7	152 aa		12	□□□□□ -0.49
PTK7-208	ENST00000470019	BPIFA4P	Q86YQ2	179 aa		12	□□□□□ -0.49
PTK7-208	ENST00000470019	NDFIP1	Q9BT67	221 aa		12	□□□□□ -0.49
PTK7-208	ENST00000470019	ZNF257	Q9Y2Q1	563 aa		12	□□□□□ -0.49
PTK7-208	ENST00000470019	FAM90A9P	A6NNJ1	464 aa		11.99	□□□□□ -0.49
PTK7-208	ENST00000470019	STAG3L2	P0CL84	134 aa		11.99	□□□□□ -0.49
PTK7-208	ENST00000470019	STAG3L3	P0CL85	134 aa		11.99	□□□□□ -0.49
PTK7-208	ENST00000470019	VDAC2	P45880	294 aa	Predicted RBP	11.99	□□□□□ -0.49
PTK7-208	ENST00000470019	TCF23	Q7RTU1	214 aa		11.99	□□□□□ -0.49
PTK7-208	ENST00000470019	TXNDC17	Q9BRA2	123 aa		11.99	□□□□□ -0.49
PTK7-208	ENST00000470019	CHRDL1	Q9BU40	450 aa		11.99	□□□□□ -0.49
PTK7-208	ENST00000470019	MUC3A	Q02505	3323 aa		11.99	□□□□□ -0.49
PTK7-208	ENST00000470019	PKD1L2	Q7Z442	2459 aa		11.99	□□□□□ -0.49
PTK7-208	ENST00000470019	AMY1A	P04745	511 aa		11.99	□□□□□ -0.49
PTK7-208	ENST00000470019	RNASE2	P10153	161 aa	Known RBP	11.99	□□□□□ -0.49
PTK7-208	ENST00000470019	PDLIM4	P50479	330 aa		11.99	□□□□□ -0.49
PTK7-208	ENST00000470019	MFAP4	P55083	255 aa		11.99	□□□□□ -0.49
PTK7-208	ENST00000470019	C3orf36	Q3SXR2	165 aa		11.99	□□□□□ -0.49
PTK7-208	ENST00000470019	FAM168A	Q92567	244 aa		11.99	□□□□□ -0.49
PTK7-208	ENST00000470019	TMEM14B	Q9NUH8	114 aa		11.99	□□□□□ -0.49
PTK7-208	ENST00000470019	PITPNC1	Q9UKF7	332 aa		11.99	□□□□□ -0.49
PTK7-208	ENST00000470019	TANC2	Q9HCD6	1990 aa		11.99	□□□□□ -0.49
PTK7-208	ENST00000470019	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.99	□□□□□ -0.49
PTK7-208	ENST00000470019	CA1	P00915	261 aa	Predicted RBP	11.98	□□□□□ -0.49
PTK7-208	ENST00000470019	TMEM219	Q86XT9	240 aa		11.98	□□□□□ -0.49
PTK7-208	ENST00000470019	LINC00518	Q8N0U6	118 aa		11.98	□□□□□ -0.49
PTK7-208	ENST00000470019	TMEM167A	Q8TBQ9	72 aa		11.98	□□□□□ -0.49
PTK7-208	ENST00000470019	NAGK	Q9UJ70	344 aa		11.98	□□□□□ -0.49
PTK7-208	ENST00000470019	FRY	Q5TBA9	3013 aa		11.98	□□□□□ -0.49
PTK7-208	ENST00000470019	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.98	□□□□□ -0.49
PTK7-208	ENST00000470019		A0A1W2PPI3	338 aa		11.98	□□□□□ -0.49
PTK7-208	ENST00000470019	ZNF586	Q9NXT0	402 aa		11.98	□□□□□ -0.49
PTK7-208	ENST00000470019	BRD3OS	Q6XYD6	125 aa		11.98	□□□□□ -0.49
PTK7-208	ENST00000470019	C1QL4	Q86Z23	238 aa		11.98	□□□□□ -0.49
PTK7-208	ENST00000470019	PIMREG	Q9BSJ6	248 aa		11.98	□□□□□ -0.49
PTK7-208	ENST00000470019	SIGLEC9	Q9Y336	463 aa		11.98	□□□□□ -0.49
PTK7-208	ENST00000470019	SELENOK	Q9Y6D0	94 aa		11.98	□□□□□ -0.49
PTK7-208	ENST00000470019	ADAMTS20	P59510	1910 aa		11.98	□□□□□ -0.49
PTK7-208	ENST00000470019	OR2T8	A6NH00	312 aa		11.97	□□□□□ -0.49
PTK7-208	ENST00000470019	GPR183	P32249	361 aa		11.97	□□□□□ -0.49
PTK7-208	ENST00000470019	VMO1	Q7Z5L0	202 aa		11.97	□□□□□ -0.49
PTK7-208	ENST00000470019	ARPC1A	Q92747	370 aa		11.97	□□□□□ -0.49
PTK7-208	ENST00000470019	ATP5I	P56385	69 aa	Predicted RBP	11.97	□□□□□ -0.49
PTK7-208	ENST00000470019	C2orf83	Q53S99	150 aa		11.97	□□□□□ -0.49
PTK7-208	ENST00000470019	WFDC3	Q8IUB2	231 aa		11.97	□□□□□ -0.49
PTK7-208	ENST00000470019	C7orf69	Q9H7B7	122 aa		11.97	□□□□□ -0.49
PTK7-208	ENST00000470019	COX6B1	P14854	86 aa		11.97	□□□□□ -0.49
PTK7-208	ENST00000470019	TEX45	Q8NA69	505 aa		11.97	□□□□□ -0.49
PTK7-208	ENST00000470019	FBXL7	Q9UJT9	491 aa		11.97	□□□□□ -0.49
PTK7-208	ENST00000470019	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.97	□□□□□ -0.49
PTK7-208	ENST00000470019	GOSR1	O95249	250 aa		11.96	□□□□□ -0.49
PTK7-208	ENST00000470019	BRWD1-AS2	P59051	145 aa		11.96	□□□□□ -0.49
PTK7-208	ENST00000470019	GFI1B	Q5VTD9	330 aa		11.96	□□□□□ -0.49
PTK7-208	ENST00000470019	LINC00479	Q96M42	142 aa		11.96	□□□□□ -0.49
PTK7-208	ENST00000470019	TCRBV4S1A1T	A0A5B7	111 aa		11.96	□□□□□ -0.49
PTK7-208	ENST00000470019	ORM1	P02763	201 aa		11.96	□□□□□ -0.49
PTK7-208	ENST00000470019	HIST1H1E	P10412	219 aa	Known RBP	11.96	□□□□□ -0.49
PTK7-208	ENST00000470019	WT1-AS	Q06250	92 aa		11.96	□□□□□ -0.49
PTK7-208	ENST00000470019	TUBA4B	Q9H853	241 aa		11.96	□□□□□ -0.49
PTK7-208	ENST00000470019	TPPP2	P59282	170 aa		11.96	□□□□□ -0.5
PTK7-208	ENST00000470019	VENTX	O95231	258 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	GPX4	P36969	197 aa	Predicted RBP	11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	SRP14	P37108	136 aa	Known RBP	11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	TMEM177	Q53S58	311 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	OR5AN1	Q8NGI8	311 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	C19orf24	Q9BVV8	132 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	MRPL32	Q9BYC8	188 aa	Known RBP	11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	C21orf62	Q9NYP8	219 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019		A0A087WWC5	75 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	MUC21	A0A0G2JKD1	596 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	MUC21	A0A140T8X8	626 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	C22orf46	C9J442	243 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	MUC21	Q5SSG8	566 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	MRPL18	Q9H0U6	180 aa	Known RBP	11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	TRAV40	A0A0B4J280	105 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	TPTE2P1	Q5T6R2	138 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	HIST1H2BK	O60814	126 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	HIST1H2BJ	P06899	126 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	HIST1H2BO	P23527	126 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	HIST1H2BB	P33778	126 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	HIST1H2BD	P58876	126 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	HIST1H2BC	P62807	126 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	HIST2H2BE	Q16778	126 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	HIST1H2BH	Q93079	126 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	PGLYRP4	Q96LB8	373 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	HIST1H2BN	Q99877	126 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	HIST1H2BM	Q99879	126 aa		11.95	□□□□□ -0.5
PTK7-208	ENST00000470019	CENPE	Q02224	2701 aa		11.94	□□□□□ -0.5

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