RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 TMEM217Q8N7C4 229 aa11.3□□□□□ -0.6
COL9A3-209ENST00000469852 OR10P1Q8NGE3 313 aa11.3□□□□□ -0.6
COL9A3-209ENST00000469852 OR2T35Q8NGX2 323 aa11.3□□□□□ -0.6
COL9A3-209ENST00000469852 CACNG8Q8WXS5 425 aa11.3□□□□□ -0.6
COL9A3-209ENST00000469852 SLC35E1Q96K37 410 aa11.3□□□□□ -0.6
COL9A3-209ENST00000469852 IGHV3OR16-8A0A075B7F1 116 aa11.29□□□□□ -0.6
COL9A3-209ENST00000469852 PET100P0DJ07 73 aa11.29□□□□□ -0.6
COL9A3-209ENST00000469852 SULT1A1P50225 295 aa11.29□□□□□ -0.6
COL9A3-209ENST00000469852 DLK1P80370 383 aa11.29□□□□□ -0.6
COL9A3-209ENST00000469852 SLC38A11Q08AI6 406 aa11.29□□□□□ -0.6
COL9A3-209ENST00000469852 SPSB3Q6PJ21 355 aa11.29□□□□□ -0.6
COL9A3-209ENST00000469852 TREML4Q6UXN2 200 aa11.29□□□□□ -0.6
COL9A3-209ENST00000469852 WFDC9Q8NEX5 89 aa11.29□□□□□ -0.6
COL9A3-209ENST00000469852 ASB13Q8WXK3 278 aa11.29□□□□□ -0.6
COL9A3-209ENST00000469852 RCC1LQ96I51 464 aaKnown RBP11.29□□□□□ -0.6
COL9A3-209ENST00000469852 SMCO3A2RU48 225 aa11.28□□□□□ -0.6
COL9A3-209ENST00000469852 OVOL1O14753 267 aa11.28□□□□□ -0.6
COL9A3-209ENST00000469852 NUPL2O15504 423 aaKnown RBP11.28□□□□□ -0.6
COL9A3-209ENST00000469852 OR10J1P30954 320 aa11.28□□□□□ -0.6
COL9A3-209ENST00000469852 GPHB5Q86YW7 130 aa11.28□□□□□ -0.6
COL9A3-209ENST00000469852 C1QL4Q86Z23 238 aa11.28□□□□□ -0.6
COL9A3-209ENST00000469852 THAP6Q8TBB0 222 aa11.28□□□□□ -0.6
COL9A3-209ENST00000469852 ST6GAL2Q96JF0 529 aa11.28□□□□□ -0.6
COL9A3-209ENST00000469852 GAR1Q9NY12 217 aaKnown RBP11.28□□□□□ -0.6
COL9A3-209ENST00000469852 IGLL1P15814 213 aa11.27□□□□□ -0.61
COL9A3-209ENST00000469852 CD33P20138 364 aa11.27□□□□□ -0.61
COL9A3-209ENST00000469852 RPL12P30050 165 aaKnown RBP11.27□□□□□ -0.61
COL9A3-209ENST00000469852 ZNF90Q03938 601 aa11.27□□□□□ -0.61
COL9A3-209ENST00000469852 AKR1C1Q04828 323 aa11.27□□□□□ -0.61
COL9A3-209ENST00000469852 IL34Q6ZMJ4 242 aa11.27□□□□□ -0.61
COL9A3-209ENST00000469852 STX12Q86Y82 276 aa11.27□□□□□ -0.61
COL9A3-209ENST00000469852 THAP8Q8NA92 274 aa11.27□□□□□ -0.61
COL9A3-209ENST00000469852 NOTCH3Q9UM47 2321 aa11.26□□□□□ -0.61
COL9A3-209ENST00000469852 FXYD6-FXYD2A0A087WZ82 144 aa11.26□□□□□ -0.61
COL9A3-209ENST00000469852 ZNF320A2RRD8 509 aa11.26□□□□□ -0.61
COL9A3-209ENST00000469852 NDUFA4O00483 81 aa11.26□□□□□ -0.61
COL9A3-209ENST00000469852 CD300CQ08708 224 aa11.26□□□□□ -0.61
COL9A3-209ENST00000469852 FGL1Q08830 312 aa11.26□□□□□ -0.61
COL9A3-209ENST00000469852 TOMM20LQ6UXN7 152 aa11.26□□□□□ -0.61
COL9A3-209ENST00000469852 ADAMTSL5Q6ZMM2 481 aa11.26□□□□□ -0.61
COL9A3-209ENST00000469852 TMEM182Q6ZP80 229 aaPredicted RBP11.26□□□□□ -0.61
COL9A3-209ENST00000469852 REC114Q7Z4M0 266 aa11.26□□□□□ -0.61
COL9A3-209ENST00000469852 OR9G4Q8NGQ1 327 aa11.26□□□□□ -0.61
COL9A3-209ENST00000469852 OR1S2Q8NGQ3 325 aa11.26□□□□□ -0.61
COL9A3-209ENST00000469852 OR5C1Q8NGR4 320 aa11.26□□□□□ -0.61
COL9A3-209ENST00000469852 TMEM190Q8WZ59 177 aa11.26□□□□□ -0.61
COL9A3-209ENST00000469852 SLC25A31Q9H0C2 315 aa11.26□□□□□ -0.61
COL9A3-209ENST00000469852 ZFAND3Q9H8U3 227 aa11.26□□□□□ -0.61
COL9A3-209ENST00000469852 HSPB11Q9Y547 144 aa11.26□□□□□ -0.61
COL9A3-209ENST00000469852 PUS1Q9Y606 427 aaKnown RBP eCLIP11.26□□□□□ -0.61
COL9A3-209ENST00000469852 TRAV30A0A087WSZ9 112 aa11.25□□□□□ -0.61
COL9A3-209ENST00000469852 TMEM213A2RRL7 107 aa11.25□□□□□ -0.61
COL9A3-209ENST00000469852 RNF222A6NCQ9 220 aa11.25□□□□□ -0.61
COL9A3-209ENST00000469852 ZFP92A6NM28 416 aa11.25□□□□□ -0.61
COL9A3-209ENST00000469852 LGALS9O00182 355 aa11.25□□□□□ -0.61
COL9A3-209ENST00000469852 ZNF207O43670 478 aaKnown RBP11.25□□□□□ -0.61
COL9A3-209ENST00000469852 RELQ04864 619 aaPredicted RBP11.25□□□□□ -0.61
COL9A3-209ENST00000469852 CLINT1Q14677 625 aa11.25□□□□□ -0.61
COL9A3-209ENST00000469852 VWC2Q2TAL6 325 aa11.25□□□□□ -0.61
COL9A3-209ENST00000469852 FAM106AQ4KMX7 169 aa11.25□□□□□ -0.61
COL9A3-209ENST00000469852 TM4SF20Q53R12 229 aa11.25□□□□□ -0.61
COL9A3-209ENST00000469852 ZNF600Q6ZNG1 722 aa11.25□□□□□ -0.61
COL9A3-209ENST00000469852 TMEM144Q7Z5S9 345 aa11.25□□□□□ -0.61
COL9A3-209ENST00000469852 LILRB2Q8N423 598 aa11.25□□□□□ -0.61
COL9A3-209ENST00000469852 OR11H4Q8NGC9 324 aa11.25□□□□□ -0.61
COL9A3-209ENST00000469852 GGACTQ9BVM4 153 aa11.25□□□□□ -0.61
COL9A3-209ENST00000469852 SMIM3Q9BZL3 60 aa11.25□□□□□ -0.61
COL9A3-209ENST00000469852 SELENOKQ9Y6D0 94 aa11.25□□□□□ -0.61
COL9A3-209ENST00000469852 DNAH3Q8TD57 4116 aa11.24□□□□□ -0.61
COL9A3-209ENST00000469852 A8MWP6 167 aa11.24□□□□□ -0.61
COL9A3-209ENST00000469852 FNDC10F2Z333 226 aa11.24□□□□□ -0.61
COL9A3-209ENST00000469852 YIF1AO95070 293 aa11.24□□□□□ -0.61
COL9A3-209ENST00000469852 CSN3P07498 182 aa11.24□□□□□ -0.61
COL9A3-209ENST00000469852 PSG1P11464 419 aa11.24□□□□□ -0.61
COL9A3-209ENST00000469852 GATA2P23769 480 aaPredicted RBP11.24□□□□□ -0.61
COL9A3-209ENST00000469852 S100A11P31949 105 aa11.24□□□□□ -0.61
COL9A3-209ENST00000469852 YPEL3P61236 119 aaPredicted RBP11.24□□□□□ -0.61
COL9A3-209ENST00000469852 HBG1P69891 147 aa11.24□□□□□ -0.61
COL9A3-209ENST00000469852 HBG2P69892 147 aa11.24□□□□□ -0.61
COL9A3-209ENST00000469852 BAXQ07812 192 aa11.24□□□□□ -0.61
COL9A3-209ENST00000469852 OR2F1Q13607 317 aa11.24□□□□□ -0.61
COL9A3-209ENST00000469852 TRGV9Q99603 122 aa11.24□□□□□ -0.61
COL9A3-209ENST00000469852 C20orf24Q9BUV8 137 aa11.24□□□□□ -0.61
COL9A3-209ENST00000469852 TMEM147Q9BVK8 224 aa11.24□□□□□ -0.61
COL9A3-209ENST00000469852 WFDC1Q9HC57 220 aa11.24□□□□□ -0.61
COL9A3-209ENST00000469852 NPVFQ9HCQ7 196 aa11.24□□□□□ -0.61
COL9A3-209ENST00000469852 UQCC1Q9NVA1 299 aa11.24□□□□□ -0.61
COL9A3-209ENST00000469852 TNFSF18Q9UNG2 199 aa11.24□□□□□ -0.61
COL9A3-209ENST00000469852 LSM4Q9Y4Z0 139 aaKnown RBP11.24□□□□□ -0.61
COL9A3-209ENST00000469852 UBE2L5PA0A1B0GUS4 154 aa11.23□□□□□ -0.61
COL9A3-209ENST00000469852 C2orf70A6NJV1 201 aa11.23□□□□□ -0.61
COL9A3-209ENST00000469852 SEC14L6B5MCN3 397 aa11.23□□□□□ -0.61
COL9A3-209ENST00000469852 TOMM40O96008 361 aa11.23□□□□□ -0.61
COL9A3-209ENST00000469852 OXLD1Q5BKU9 147 aa11.23□□□□□ -0.61
COL9A3-209ENST00000469852 ZNF546Q86UE3 836 aa11.23□□□□□ -0.61
COL9A3-209ENST00000469852 AQP10Q96PS8 301 aa11.23□□□□□ -0.61
COL9A3-209ENST00000469852 MGST2Q99735 147 aa11.23□□□□□ -0.61
COL9A3-209ENST00000469852 WDR83OSQ9Y284 106 aa11.23□□□□□ -0.61
COL9A3-209ENST00000469852 G3V4G9 280 aa11.22□□□□□ -0.61
COL9A3-209ENST00000469852 SAP30O75446 220 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms