RNA–Protein interactions for RNA: ENST00000469558.1

MCF2L-222, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-222ENST00000469558 RBMY1EA6NEQ0 496 aaKnown RBP8.7□□□□□ -1.02
MCF2L-222ENST00000469558 TSPAN4O14817 238 aa8.7□□□□□ -1.02
MCF2L-222ENST00000469558 SYNGR2O43760 224 aa8.7□□□□□ -1.02
MCF2L-222ENST00000469558 IFNA10P01566 189 aa8.7□□□□□ -1.02
MCF2L-222ENST00000469558 RBMY1DP0C7P1 496 aaKnown RBP8.7□□□□□ -1.02
MCF2L-222ENST00000469558 NHLRC4P0CG21 123 aaPredicted RBP8.7□□□□□ -1.02
MCF2L-222ENST00000469558 SLC25A4P12235 298 aa8.7□□□□□ -1.02
MCF2L-222ENST00000469558 GUCA2BQ16661 112 aa8.7□□□□□ -1.02
MCF2L-222ENST00000469558 ODF3L2Q3SX64 289 aa8.7□□□□□ -1.02
MCF2L-222ENST00000469558 C4orf46Q504U0 113 aa8.7□□□□□ -1.02
MCF2L-222ENST00000469558 SLC16A13Q7RTY0 426 aa8.7□□□□□ -1.02
MCF2L-222ENST00000469558 GTSCR1Q86UQ5 136 aa8.7□□□□□ -1.02
MCF2L-222ENST00000469558 ST8SIA2Q92186 375 aa8.7□□□□□ -1.02
MCF2L-222ENST00000469558 NPIPB3Q92617 1050 aa8.7□□□□□ -1.02
MCF2L-222ENST00000469558 SEC22CQ9BRL7 303 aa8.7□□□□□ -1.02
MCF2L-222ENST00000469558 RHPN1-AS1Q9BWJ2 59 aa8.7□□□□□ -1.02
MCF2L-222ENST00000469558 IGKV1OR2-108A0A075B7D4 117 aa8.69□□□□□ -1.02
MCF2L-222ENST00000469558 RPS10-NUDT3A0A1W2PQS6 291 aa8.69□□□□□ -1.02
MCF2L-222ENST00000469558 YIF1AO95070 293 aa8.69□□□□□ -1.02
MCF2L-222ENST00000469558 OR10J1P30954 320 aa8.69□□□□□ -1.02
MCF2L-222ENST00000469558 PAX9P55771 341 aa8.69□□□□□ -1.02
MCF2L-222ENST00000469558 POLR2GP62487 172 aaKnown RBP eCLIP8.69□□□□□ -1.02
MCF2L-222ENST00000469558 ZNF846Q147U1 533 aa8.69□□□□□ -1.02
MCF2L-222ENST00000469558 HAGHQ16775 308 aa8.69□□□□□ -1.02
MCF2L-222ENST00000469558 COQ8AQ8NI60 647 aa8.69□□□□□ -1.02
MCF2L-222ENST00000469558 SPAG8Q99932 426 aaPredicted RBP8.69□□□□□ -1.02
MCF2L-222ENST00000469558 WDR12Q9GZL7 423 aaKnown RBP8.69□□□□□ -1.02
MCF2L-222ENST00000469558 U3KQE9 123 aa8.69□□□□□ -1.02
MCF2L-222ENST00000469558 TRAV14DV4A0A0A6YYC5 116 aa8.68□□□□□ -1.02
MCF2L-222ENST00000469558 PMS2P5A8MQ11 134 aa8.68□□□□□ -1.02
MCF2L-222ENST00000469558 H3BP45 60 aa8.68□□□□□ -1.02
MCF2L-222ENST00000469558 WRBO00258 174 aa8.68□□□□□ -1.02
MCF2L-222ENST00000469558 CCSO14618 274 aa8.68□□□□□ -1.02
MCF2L-222ENST00000469558 CRYBB3P26998 211 aa8.68□□□□□ -1.02
MCF2L-222ENST00000469558 ATP5IP56385 69 aaPredicted RBP8.68□□□□□ -1.02
MCF2L-222ENST00000469558 YPEL3P61236 119 aaPredicted RBP8.68□□□□□ -1.02
MCF2L-222ENST00000469558 GAMTQ14353 236 aa8.68□□□□□ -1.02
MCF2L-222ENST00000469558 USF2Q15853 346 aaPredicted RBP8.68□□□□□ -1.02
MCF2L-222ENST00000469558 ZBTB8BQ8NAP8 495 aaPredicted RBP8.68□□□□□ -1.02
MCF2L-222ENST00000469558 OR1S2Q8NGQ3 325 aa8.68□□□□□ -1.02
MCF2L-222ENST00000469558 ZNF431Q8TF32 576 aaPredicted RBP8.68□□□□□ -1.02
MCF2L-222ENST00000469558 ACY3Q96HD9 319 aa8.68□□□□□ -1.02
MCF2L-222ENST00000469558 RCL1Q9Y2P8 373 aaKnown RBP8.68□□□□□ -1.02
MCF2L-222ENST00000469558 U3KQK5 164 aa8.68□□□□□ -1.02
MCF2L-222ENST00000469558 TRAV30A0A087WSZ9 112 aa8.67□□□□□ -1.02
MCF2L-222ENST00000469558 IGHV3-66A0A0C4DH42 116 aa8.67□□□□□ -1.02
MCF2L-222ENST00000469558 OR11H12B2RN74 326 aa8.67□□□□□ -1.02
MCF2L-222ENST00000469558 CCNKO75909 580 aa8.67□□□□□ -1.02
MCF2L-222ENST00000469558 H2AFB2P0C5Z0 115 aa8.67□□□□□ -1.02
MCF2L-222ENST00000469558 GPX4P36969 197 aaPredicted RBP8.67□□□□□ -1.02
MCF2L-222ENST00000469558 IAH1Q2TAA2 248 aaPredicted RBP8.67□□□□□ -1.02
MCF2L-222ENST00000469558 RBPMS2Q6ZRY4 209 aaKnown RBP8.67□□□□□ -1.02
MCF2L-222ENST00000469558 CSMD3Q7Z407 3707 aa8.67□□□□□ -1.02
MCF2L-222ENST00000469558 NOXA1Q86UR1 476 aa8.67□□□□□ -1.02
MCF2L-222ENST00000469558 STPG3Q8N7X2 389 aa8.67□□□□□ -1.02
MCF2L-222ENST00000469558 C11orf1Q9H5F2 150 aa8.67□□□□□ -1.02
MCF2L-222ENST00000469558 SRD5A3Q9H8P0 318 aa8.67□□□□□ -1.02
MCF2L-222ENST00000469558 FAM240BA0A1B0GVZ2 78 aa8.66□□□□□ -1.02
MCF2L-222ENST00000469558 MED6O75586 246 aa8.66□□□□□ -1.02
MCF2L-222ENST00000469558 DFFBO76075 338 aa8.66□□□□□ -1.02
MCF2L-222ENST00000469558 TOMM40O96008 361 aa8.66□□□□□ -1.02
MCF2L-222ENST00000469558 MBPP02686 304 aaPredicted RBP8.66□□□□□ -1.02
MCF2L-222ENST00000469558 IFNA4P05014 189 aa8.66□□□□□ -1.02
MCF2L-222ENST00000469558 PSG1P11464 419 aa8.66□□□□□ -1.02
MCF2L-222ENST00000469558 NKX2-1P43699 371 aaPredicted RBP8.66□□□□□ -1.02
MCF2L-222ENST00000469558 ZNF90Q03938 601 aa8.66□□□□□ -1.02
MCF2L-222ENST00000469558 IL15RAQ13261 267 aa8.66□□□□□ -1.02
MCF2L-222ENST00000469558 ETFRF1Q6IPR1 90 aa8.66□□□□□ -1.02
MCF2L-222ENST00000469558 TMEM14EPQ6UXP3 125 aa8.66□□□□□ -1.02
MCF2L-222ENST00000469558 NRARPQ7Z6K4 114 aa8.66□□□□□ -1.02
MCF2L-222ENST00000469558 FAM24BQ8N5W8 94 aa8.66□□□□□ -1.02
MCF2L-222ENST00000469558 THAP8Q8NA92 274 aa8.66□□□□□ -1.02
MCF2L-222ENST00000469558 RCHY1Q96PM5 261 aa8.66□□□□□ -1.02
MCF2L-222ENST00000469558 CIB3Q96Q77 187 aaPredicted RBP8.66□□□□□ -1.02
MCF2L-222ENST00000469558 GINS3Q9BRX5 216 aa8.66□□□□□ -1.02
MCF2L-222ENST00000469558 UBQLN2Q9UHD9 624 aa8.66□□□□□ -1.02
MCF2L-222ENST00000469558 SSSCA1O60232 199 aa8.65□□□□□ -1.02
MCF2L-222ENST00000469558 IFNA21P01568 189 aa8.65□□□□□ -1.02
MCF2L-222ENST00000469558 IL5P05113 134 aa8.65□□□□□ -1.02
MCF2L-222ENST00000469558 SPANXN5Q5MJ07 72 aa8.65□□□□□ -1.02
MCF2L-222ENST00000469558 TCF24Q7RTU0 167 aa8.65□□□□□ -1.02
MCF2L-222ENST00000469558 SMIM8Q96KF7 97 aa8.65□□□□□ -1.02
MCF2L-222ENST00000469558 FAM110AQ9BQ89 295 aa8.65□□□□□ -1.02
MCF2L-222ENST00000469558 RETNQ9HD89 108 aa8.65□□□□□ -1.02
MCF2L-222ENST00000469558 KMT2CQ8NEZ4 4911 aaKnown RBP8.65□□□□□ -1.03
MCF2L-222ENST00000469558 IL4P05112 153 aa8.64□□□□□ -1.03
MCF2L-222ENST00000469558 NPPCP23582 126 aa8.64□□□□□ -1.03
MCF2L-222ENST00000469558 ARL16Q0P5N6 197 aa8.64□□□□□ -1.03
MCF2L-222ENST00000469558 ZNF124Q15973 351 aa8.64□□□□□ -1.03
MCF2L-222ENST00000469558 LAMTOR1Q6IAA8 161 aa8.64□□□□□ -1.03
MCF2L-222ENST00000469558 MZT2BQ6NZ67 158 aa8.64□□□□□ -1.03
MCF2L-222ENST00000469558 TMEM182Q6ZP80 229 aaPredicted RBP8.64□□□□□ -1.03
MCF2L-222ENST00000469558 ACOT7LQ6ZUV0 252 aa8.64□□□□□ -1.03
MCF2L-222ENST00000469558 GBGT1Q8N5D6 347 aa8.64□□□□□ -1.03
MCF2L-222ENST00000469558 C12orf45Q8N5I9 185 aaPredicted RBP8.64□□□□□ -1.03
MCF2L-222ENST00000469558 GLMPQ8WWB7 406 aa8.64□□□□□ -1.03
MCF2L-222ENST00000469558 METTL26Q96S19 204 aa8.64□□□□□ -1.03
MCF2L-222ENST00000469558 TRGV9Q99603 122 aa8.64□□□□□ -1.03
MCF2L-222ENST00000469558 MS4A6AQ9H2W1 248 aa8.64□□□□□ -1.03
MCF2L-222ENST00000469558 TUBA4BQ9H853 241 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms