RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, human

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX1-204	ENST00000467957	CIB3	Q96Q77	187 aa	Predicted RBP	13.95	□□□□□ -0.18
YBX1-204	ENST00000467957	RNF2	Q99496	336 aa		13.95	□□□□□ -0.18
YBX1-204	ENST00000467957	WFDC10A	Q9H1F0	79 aa		13.95	□□□□□ -0.18
YBX1-204	ENST00000467957	C20orf85	Q9H1P6	137 aa		13.95	□□□□□ -0.18
YBX1-204	ENST00000467957	VSIR	Q9H7M9	311 aa		13.95	□□□□□ -0.18
YBX1-204	ENST00000467957	SYNGR2	O43760	224 aa		13.94	□□□□□ -0.18
YBX1-204	ENST00000467957	ADAP1	O75689	374 aa		13.94	□□□□□ -0.18
YBX1-204	ENST00000467957	TCRB	P04435	133 aa		13.94	□□□□□ -0.18
YBX1-204	ENST00000467957	CD5	P06127	495 aa		13.94	□□□□□ -0.18
YBX1-204	ENST00000467957	GPX4	P36969	197 aa	Predicted RBP	13.94	□□□□□ -0.18
YBX1-204	ENST00000467957	YPEL3	P61236	119 aa	Predicted RBP	13.94	□□□□□ -0.18
YBX1-204	ENST00000467957	IFITM3	Q01628	133 aa		13.94	□□□□□ -0.18
YBX1-204	ENST00000467957	TIGIT	Q495A1	244 aa		13.94	□□□□□ -0.18
YBX1-204	ENST00000467957	FAM90A2P	Q658T7	463 aa		13.94	□□□□□ -0.18
YBX1-204	ENST00000467957	MITD1	Q8WV92	249 aa		13.94	□□□□□ -0.18
YBX1-204	ENST00000467957	RCHY1	Q96PM5	261 aa		13.94	□□□□□ -0.18
YBX1-204	ENST00000467957	IGHV3-49	A0A0A0MS15	119 aa		13.93	□□□□□ -0.18
YBX1-204	ENST00000467957	IFNA21	P01568	189 aa		13.93	□□□□□ -0.18
YBX1-204	ENST00000467957	IFNA4	P05014	189 aa		13.93	□□□□□ -0.18
YBX1-204	ENST00000467957	OR10J1	P30954	320 aa		13.93	□□□□□ -0.18
YBX1-204	ENST00000467957	ASAH1	Q13510	395 aa		13.93	□□□□□ -0.18
YBX1-204	ENST00000467957	NPIPB3	Q92617	1050 aa		13.93	□□□□□ -0.18
YBX1-204	ENST00000467957	SRD5A3	Q9H8P0	318 aa		13.93	□□□□□ -0.18
YBX1-204	ENST00000467957	TBC1D24	Q9ULP9	559 aa		13.93	□□□□□ -0.18
YBX1-204	ENST00000467957	HUWE1	Q7Z6Z7	4374 aa	Known RBP	13.92	□□□□□ -0.18
YBX1-204	ENST00000467957	RBMY1B	A6NDE4	496 aa	Known RBP	13.92	□□□□□ -0.18
YBX1-204	ENST00000467957	RBMY1E	A6NEQ0	496 aa	Known RBP	13.92	□□□□□ -0.18
YBX1-204	ENST00000467957	OR4C46	A6NHA9	309 aa		13.92	□□□□□ -0.18
YBX1-204	ENST00000467957	RBMY1D	P0C7P1	496 aa	Known RBP	13.92	□□□□□ -0.18
YBX1-204	ENST00000467957	IAPP	P10997	89 aa		13.92	□□□□□ -0.18
YBX1-204	ENST00000467957	NPPC	P23582	126 aa		13.92	□□□□□ -0.18
YBX1-204	ENST00000467957	RAB11A	P62491	216 aa		13.92	□□□□□ -0.18
YBX1-204	ENST00000467957	RPP30	P78346	268 aa	Known RBP	13.92	□□□□□ -0.18
YBX1-204	ENST00000467957	ID3	Q02535	119 aa		13.92	□□□□□ -0.18
YBX1-204	ENST00000467957		Q8WTZ3	238 aa		13.92	□□□□□ -0.18
YBX1-204	ENST00000467957	ST8SIA2	Q92186	375 aa		13.92	□□□□□ -0.18
YBX1-204	ENST00000467957	ACY3	Q96HD9	319 aa		13.92	□□□□□ -0.18
YBX1-204	ENST00000467957	FAM110A	Q9BQ89	295 aa		13.92	□□□□□ -0.18
YBX1-204	ENST00000467957	MAGT1	Q9H0U3	335 aa		13.92	□□□□□ -0.18
YBX1-204	ENST00000467957	MPTX1	A8MV57	137 aa		13.91	□□□□□ -0.18
YBX1-204	ENST00000467957	APOH	P02749	345 aa	Predicted RBP	13.91	□□□□□ -0.18
YBX1-204	ENST00000467957	CRYBB3	P26998	211 aa		13.91	□□□□□ -0.18
YBX1-204	ENST00000467957	OR4D5	Q8NGN0	318 aa		13.91	□□□□□ -0.18
YBX1-204	ENST00000467957	METTL26	Q96S19	204 aa		13.91	□□□□□ -0.18
YBX1-204	ENST00000467957	SPATA25	Q9BR10	227 aa		13.91	□□□□□ -0.18
YBX1-204	ENST00000467957	TMEM231	Q9H6L2	316 aa		13.91	□□□□□ -0.18
YBX1-204	ENST00000467957	STAB2	Q8WWQ8	2551 aa		13.9	□□□□□ -0.18
YBX1-204	ENST00000467957	IGHV3OR16-13	A0A075B7E8	117 aa		13.9	□□□□□ -0.18
YBX1-204	ENST00000467957	IGHV3-74	A0A0B4J1X5	117 aa		13.9	□□□□□ -0.18
YBX1-204	ENST00000467957		A0A1W2PS18	150 aa		13.9	□□□□□ -0.18
YBX1-204	ENST00000467957	GAMT	Q14353	236 aa		13.9	□□□□□ -0.18
YBX1-204	ENST00000467957	MZT2B	Q6NZ67	158 aa		13.9	□□□□□ -0.18
YBX1-204	ENST00000467957	LILRB2	Q8N423	598 aa		13.9	□□□□□ -0.18
YBX1-204	ENST00000467957	NUDT15	Q9NV35	164 aa		13.9	□□□□□ -0.18
YBX1-204	ENST00000467957	TRAV6	A0A075B6T7	132 aa		13.89	□□□□□ -0.19
YBX1-204	ENST00000467957	FAM240B	A0A1B0GVZ2	78 aa		13.89	□□□□□ -0.19
YBX1-204	ENST00000467957	WRB	O00258	174 aa		13.89	□□□□□ -0.19
YBX1-204	ENST00000467957	TOMM40	O96008	361 aa		13.89	□□□□□ -0.19
YBX1-204	ENST00000467957	NKX2-1	P43699	371 aa	Predicted RBP	13.89	□□□□□ -0.19
YBX1-204	ENST00000467957	ODF3L2	Q3SX64	289 aa		13.89	□□□□□ -0.19
YBX1-204	ENST00000467957	TCF24	Q7RTU0	167 aa		13.89	□□□□□ -0.19
YBX1-204	ENST00000467957	SLC35E1	Q96K37	410 aa		13.89	□□□□□ -0.19
YBX1-204	ENST00000467957		U3KQE9	123 aa		13.89	□□□□□ -0.19
YBX1-204	ENST00000467957	RD3L	P0DJH9	198 aa		13.88	□□□□□ -0.19
YBX1-204	ENST00000467957	CMC4	P56277	68 aa	Predicted RBP	13.88	□□□□□ -0.19
YBX1-204	ENST00000467957	PAFAH1B2	P68402	229 aa		13.88	□□□□□ -0.19
YBX1-204	ENST00000467957	NARS2	Q96I59	477 aa	Known RBP	13.88	□□□□□ -0.19
YBX1-204	ENST00000467957	CITED4	Q96RK1	184 aa		13.88	□□□□□ -0.19
YBX1-204	ENST00000467957	UBQLN2	Q9UHD9	624 aa		13.88	□□□□□ -0.19
YBX1-204	ENST00000467957	TENM3	Q9P273	2699 aa		13.87	□□□□□ -0.19
YBX1-204	ENST00000467957	TRAV2	A0A0B4J234	112 aa		13.87	□□□□□ -0.19
YBX1-204	ENST00000467957	IGHV3-66	A0A0C4DH42	116 aa		13.87	□□□□□ -0.19
YBX1-204	ENST00000467957	PRSS46	E5RG02	174 aa		13.87	□□□□□ -0.19
YBX1-204	ENST00000467957	DFFB	O76075	338 aa		13.87	□□□□□ -0.19
YBX1-204	ENST00000467957	H2AFB2	P0C5Z0	115 aa		13.87	□□□□□ -0.19
YBX1-204	ENST00000467957	PSG1	P11464	419 aa		13.87	□□□□□ -0.19
YBX1-204	ENST00000467957	DEFA1	P59665	94 aa		13.87	□□□□□ -0.19
YBX1-204	ENST00000467957	DEFA3	P59666	94 aa		13.87	□□□□□ -0.19
YBX1-204	ENST00000467957	POLR2G	P62487	172 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
YBX1-204	ENST00000467957	IAH1	Q2TAA2	248 aa	Predicted RBP	13.87	□□□□□ -0.19
YBX1-204	ENST00000467957	SPANXN5	Q5MJ07	72 aa		13.87	□□□□□ -0.19
YBX1-204	ENST00000467957	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.87	□□□□□ -0.19
YBX1-204	ENST00000467957	ZNF431	Q8TF32	576 aa	Predicted RBP	13.87	□□□□□ -0.19
YBX1-204	ENST00000467957	GGTLC1	Q9BX51	225 aa		13.87	□□□□□ -0.19
YBX1-204	ENST00000467957	STRAP	Q9Y3F4	350 aa	Known RBP	13.87	□□□□□ -0.19
YBX1-204	ENST00000467957	IGKV1D-37	A0A075B6S9	117 aa		13.86	□□□□□ -0.19
YBX1-204	ENST00000467957	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.86	□□□□□ -0.19
YBX1-204	ENST00000467957	IL4	P05112	153 aa		13.86	□□□□□ -0.19
YBX1-204	ENST00000467957	HNRNPC	P07910	306 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
YBX1-204	ENST00000467957	P2RY1	P47900	373 aa		13.86	□□□□□ -0.19
YBX1-204	ENST00000467957	USF2	Q15853	346 aa	Predicted RBP	13.86	□□□□□ -0.19
YBX1-204	ENST00000467957	SMIM8	Q96KF7	97 aa		13.86	□□□□□ -0.19
YBX1-204	ENST00000467957	PAIP2B	Q9ULR5	123 aa	Known RBP	13.86	□□□□□ -0.19
YBX1-204	ENST00000467957	IGKV3-7	A0A075B6H7	116 aa		13.85	□□□□□ -0.19
YBX1-204	ENST00000467957	ZFP92	A6NM28	416 aa		13.85	□□□□□ -0.19
YBX1-204	ENST00000467957	GBGT1	Q8N5D6	347 aa		13.85	□□□□□ -0.19
YBX1-204	ENST00000467957	THAP8	Q8NA92	274 aa		13.85	□□□□□ -0.19
YBX1-204	ENST00000467957	OR51G1	Q8NGK1	321 aa		13.85	□□□□□ -0.19
YBX1-204	ENST00000467957	GRAMD2B	Q96HH9	432 aa		13.85	□□□□□ -0.19
YBX1-204	ENST00000467957	SEC22C	Q9BRL7	303 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms