RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 KHDC3LQ587J8 217 aa0.81□□□□□ -2.28
ATG3-204ENST00000467275 Q6Q795 121 aa0.81□□□□□ -2.28
ATG3-204ENST00000467275 OOSP2Q86WS3 158 aa0.81□□□□□ -2.28
ATG3-204ENST00000467275 PHF13Q86YI8 300 aaPredicted RBP0.81□□□□□ -2.28
ATG3-204ENST00000467275 KRT222Q8N1A0 295 aa0.81□□□□□ -2.28
ATG3-204ENST00000467275 OR52L1Q8NGH7 329 aa0.81□□□□□ -2.28
ATG3-204ENST00000467275 OR51A2Q8NGJ7 313 aa0.81□□□□□ -2.28
ATG3-204ENST00000467275 RNF122Q9H9V4 155 aa0.81□□□□□ -2.28
ATG3-204ENST00000467275 OSTCQ9NRP0 149 aa0.81□□□□□ -2.28
ATG3-204ENST00000467275 OR5AC2Q9NZP5 309 aa0.81□□□□□ -2.28
ATG3-204ENST00000467275 SCN8AQ9UQD0 1980 aa0.81□□□□□ -2.28
ATG3-204ENST00000467275 KIF1BO60333 1816 aa0.8□□□□□ -2.28
ATG3-204ENST00000467275 OR2B3O76000 313 aa0.8□□□□□ -2.28
ATG3-204ENST00000467275 C8GP07360 202 aa0.8□□□□□ -2.28
ATG3-204ENST00000467275 ASAH2BP0C7U1 165 aa0.8□□□□□ -2.28
ATG3-204ENST00000467275 BAALC-AS2P0C853 105 aa0.8□□□□□ -2.28
ATG3-204ENST00000467275 PPIBP23284 216 aaKnown RBP0.8□□□□□ -2.28
ATG3-204ENST00000467275 S100A4P26447 101 aaKnown RBP0.8□□□□□ -2.28
ATG3-204ENST00000467275 CASP1P29466 404 aa0.8□□□□□ -2.28
ATG3-204ENST00000467275 PDE6HQ13956 83 aa0.8□□□□□ -2.28
ATG3-204ENST00000467275 AKIRIN2Q53H80 203 aa0.8□□□□□ -2.28
ATG3-204ENST00000467275 SPANXN5Q5MJ07 72 aa0.8□□□□□ -2.28
ATG3-204ENST00000467275 LCA10Q71F78 164 aa0.8□□□□□ -2.28
ATG3-204ENST00000467275 TRAPPC6BQ86SZ2 158 aa0.8□□□□□ -2.28
ATG3-204ENST00000467275 LINC00311Q8N616 119 aa0.8□□□□□ -2.28
ATG3-204ENST00000467275 SNURFQ9Y675 71 aa0.8□□□□□ -2.28
ATG3-204ENST00000467275 C2orf70A6NJV1 201 aa0.79□□□□□ -2.28
ATG3-204ENST00000467275 TMEM210A6NLX4 147 aa0.79□□□□□ -2.28
ATG3-204ENST00000467275 OR7C1O76099 320 aaPredicted RBP0.79□□□□□ -2.28
ATG3-204ENST00000467275 IL9P15248 144 aa0.79□□□□□ -2.28
ATG3-204ENST00000467275 YPEL3P61236 119 aaPredicted RBP0.79□□□□□ -2.28
ATG3-204ENST00000467275 CTAG1AP78358 180 aa0.79□□□□□ -2.28
ATG3-204ENST00000467275 SPA17Q15506 151 aa0.79□□□□□ -2.28
ATG3-204ENST00000467275 OR13D1Q8NGV5 346 aa0.79□□□□□ -2.28
ATG3-204ENST00000467275 SLC25A40Q8TBP6 338 aa0.79□□□□□ -2.28
ATG3-204ENST00000467275 WFDC5Q8TCV5 224 aa0.79□□□□□ -2.28
ATG3-204ENST00000467275 ADAT3Q96EY9 351 aaPredicted RBP0.79□□□□□ -2.28
ATG3-204ENST00000467275 SIGMAR1Q99720 223 aa0.79□□□□□ -2.28
ATG3-204ENST00000467275 TAS2R4Q9NYW5 299 aa0.79□□□□□ -2.28
ATG3-204ENST00000467275 TVP23BQ9NYZ1 205 aa0.79□□□□□ -2.28
ATG3-204ENST00000467275 EPDR1Q9UM22 224 aa0.79□□□□□ -2.28
ATG3-204ENST00000467275 CACNA1BQ00975 2339 aa0.79□□□□□ -2.28
ATG3-204ENST00000467275 RTL1A6NKG5 1358 aa0.79□□□□□ -2.28
ATG3-204ENST00000467275 A0A087X0T9 212 aa0.78□□□□□ -2.28
ATG3-204ENST00000467275 TRAV1-1A0A0B4J248 108 aa0.78□□□□□ -2.28
ATG3-204ENST00000467275 OR1I1O60431 355 aa0.78□□□□□ -2.28
ATG3-204ENST00000467275 UBL3O95164 117 aa0.78□□□□□ -2.28
ATG3-204ENST00000467275 IFNA6P05013 189 aa0.78□□□□□ -2.28
ATG3-204ENST00000467275 OR4E1P0C645 316 aa0.78□□□□□ -2.28
ATG3-204ENST00000467275 BRS3P32247 399 aa0.78□□□□□ -2.28
ATG3-204ENST00000467275 SSR2P43308 183 aa0.78□□□□□ -2.28
ATG3-204ENST00000467275 PLCXD2Q0VAA5 305 aa0.78□□□□□ -2.28
ATG3-204ENST00000467275 TEX36Q5VZQ5 186 aa0.78□□□□□ -2.28
ATG3-204ENST00000467275 OR11H6Q8NGC7 330 aa0.78□□□□□ -2.28
ATG3-204ENST00000467275 OR8D4Q8NGM9 314 aa0.78□□□□□ -2.28
ATG3-204ENST00000467275 OR4C6Q8NH72 309 aa0.78□□□□□ -2.28
ATG3-204ENST00000467275 OR10J5Q8NHC4 309 aa0.78□□□□□ -2.28
ATG3-204ENST00000467275 ITFG2Q969R8 447 aa0.78□□□□□ -2.28
ATG3-204ENST00000467275 TMEM133Q9H2Q1 129 aa0.78□□□□□ -2.28
ATG3-204ENST00000467275 PARVBQ9HBI1 364 aa0.78□□□□□ -2.28
ATG3-204ENST00000467275 NHP2Q9NX24 153 aaKnown RBP0.78□□□□□ -2.28
ATG3-204ENST00000467275 HS3ST2Q9Y278 367 aa0.78□□□□□ -2.28
ATG3-204ENST00000467275 ROS1P08922 2347 aa0.78□□□□□ -2.28
ATG3-204ENST00000467275 ARHGEF28Q8N1W1 1705 aaKnown RBP0.78□□□□□ -2.29
ATG3-204ENST00000467275 TAF1LQ8IZX4 1826 aa0.78□□□□□ -2.29
ATG3-204ENST00000467275 AHNAKQ09666 5890 aaKnown RBP0.77□□□□□ -2.29
ATG3-204ENST00000467275 LOC110117498A0A087WWA1 95 aa0.77□□□□□ -2.29
ATG3-204ENST00000467275 IGKV1-9A0A0C4DH69 117 aa0.77□□□□□ -2.29
ATG3-204ENST00000467275 C7orf71A4D174 169 aa0.77□□□□□ -2.29
ATG3-204ENST00000467275 CST2P09228 141 aa0.77□□□□□ -2.29
ATG3-204ENST00000467275 SMIM17P0DL12 118 aa0.77□□□□□ -2.29
ATG3-204ENST00000467275 SRIP30626 198 aa0.77□□□□□ -2.29
ATG3-204ENST00000467275 HOXA6P31267 233 aa0.77□□□□□ -2.29
ATG3-204ENST00000467275 RHOGP84095 191 aa0.77□□□□□ -2.29
ATG3-204ENST00000467275 GPR146Q96CH1 333 aa0.77□□□□□ -2.29
ATG3-204ENST00000467275 BTF3L4Q96K17 158 aa0.77□□□□□ -2.29
ATG3-204ENST00000467275 KIFC1Q9BW19 673 aa0.77□□□□□ -2.29
ATG3-204ENST00000467275 NMNAT1Q9HAN9 279 aaPredicted RBP0.77□□□□□ -2.29
ATG3-204ENST00000467275 MED1Q15648 1581 aaPredicted RBP0.77□□□□□ -2.29
ATG3-204ENST00000467275 KIAA1549Q9HCM3 1950 aa0.77□□□□□ -2.29
ATG3-204ENST00000467275 A0A087WX48 190 aa0.76□□□□□ -2.29
ATG3-204ENST00000467275 TRAV12-1A0A0B4J245 112 aa0.76□□□□□ -2.29
ATG3-204ENST00000467275 J3QRK9 145 aa0.76□□□□□ -2.29
ATG3-204ENST00000467275 LYZL6O75951 148 aa0.76□□□□□ -2.29
ATG3-204ENST00000467275 MGST1P10620 155 aaKnown RBP0.76□□□□□ -2.29
ATG3-204ENST00000467275 CYBAP13498 195 aa0.76□□□□□ -2.29
ATG3-204ENST00000467275 RNASE4P34096 147 aaKnown RBP0.76□□□□□ -2.29
ATG3-204ENST00000467275 DEFA3P59666 94 aa0.76□□□□□ -2.29
ATG3-204ENST00000467275 RAB4BP61018 213 aa0.76□□□□□ -2.29
ATG3-204ENST00000467275 REEP5Q00765 189 aa0.76□□□□□ -2.29
ATG3-204ENST00000467275 TSNQ15631 228 aaKnown RBP0.76□□□□□ -2.29
ATG3-204ENST00000467275 RNASE10Q5GAN6 216 aaKnown RBP0.76□□□□□ -2.29
ATG3-204ENST00000467275 ODF3Q96PU9 254 aa0.76□□□□□ -2.29
ATG3-204ENST00000467275 SLC35A3Q9Y2D2 325 aa0.76□□□□□ -2.29
ATG3-204ENST00000467275 MCM3APO60318 1980 aa0.76□□□□□ -2.29
ATG3-204ENST00000467275 DOCK4Q8N1I0 1966 aa0.76□□□□□ -2.29
ATG3-204ENST00000467275 ADGRL3Q9HAR2 1447 aa0.75□□□□□ -2.29
ATG3-204ENST00000467275 IGKV2D-26A0A0A0MRZ7 120 aa0.75□□□□□ -2.29
ATG3-204ENST00000467275 TRAV4A0A0B4J268 109 aa0.75□□□□□ -2.29
ATG3-204ENST00000467275 FAM159BA6NKW6 160 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms