RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 ZNF709Q8N972 641 aa10.11□□□□□ -0.79
COL4A1-202ENST00000467182 BPIFCQ8NFQ6 507 aa10.11□□□□□ -0.79
COL4A1-202ENST00000467182 ZNF502Q8TBZ5 544 aa10.11□□□□□ -0.79
COL4A1-202ENST00000467182 ZNF418Q8TF45 676 aaPredicted RBP10.11□□□□□ -0.79
COL4A1-202ENST00000467182 SLC39A9Q9NUM3 307 aa10.11□□□□□ -0.79
COL4A1-202ENST00000467182 C21orf62Q9NYP8 219 aa10.11□□□□□ -0.79
COL4A1-202ENST00000467182 PSMB11A5LHX3 300 aa10.1□□□□□ -0.79
COL4A1-202ENST00000467182 LINC00862A6NCI5 91 aa10.1□□□□□ -0.79
COL4A1-202ENST00000467182 FAM223BA6NKX1 122 aa10.1□□□□□ -0.79
COL4A1-202ENST00000467182 ZNF705EA8MWA4 302 aaPredicted RBP10.1□□□□□ -0.79
COL4A1-202ENST00000467182 CRLF1O75462 422 aa10.1□□□□□ -0.79
COL4A1-202ENST00000467182 TSPAN15O95858 294 aa10.1□□□□□ -0.79
COL4A1-202ENST00000467182 IGHV3-23P01764 117 aa10.1□□□□□ -0.79
COL4A1-202ENST00000467182 MFAP4P55083 255 aa10.1□□□□□ -0.79
COL4A1-202ENST00000467182 B2MP61769 119 aa10.1□□□□□ -0.79
COL4A1-202ENST00000467182 RAB31Q13636 194 aa10.1□□□□□ -0.79
COL4A1-202ENST00000467182 TIGITQ495A1 244 aa10.1□□□□□ -0.79
COL4A1-202ENST00000467182 AKR1C8PQ5T2L2 129 aa10.1□□□□□ -0.79
COL4A1-202ENST00000467182 DPPA3Q6W0C5 159 aa10.1□□□□□ -0.79
COL4A1-202ENST00000467182 FAM223AQ8IWN6 122 aa10.1□□□□□ -0.79
COL4A1-202ENST00000467182 RPP25LQ8N5L8 163 aaKnown RBP10.1□□□□□ -0.79
COL4A1-202ENST00000467182 LYPD6BQ8NI32 183 aa10.1□□□□□ -0.79
COL4A1-202ENST00000467182 CCDC140Q96MF4 163 aa10.1□□□□□ -0.79
COL4A1-202ENST00000467182 TXN2Q99757 166 aa10.1□□□□□ -0.79
COL4A1-202ENST00000467182 KLK15Q9H2R5 256 aa10.1□□□□□ -0.79
COL4A1-202ENST00000467182 ZNF355PQ9NSJ1 428 aa10.1□□□□□ -0.79
COL4A1-202ENST00000467182 SETXQ7Z333 2677 aaKnown RBP10.1□□□□□ -0.79
COL4A1-202ENST00000467182 HIVEP2P31629 2446 aa10.09□□□□□ -0.79
COL4A1-202ENST00000467182 TMEM89A2RUT3 159 aa10.09□□□□□ -0.79
COL4A1-202ENST00000467182 ZFP92A6NM28 416 aa10.09□□□□□ -0.79
COL4A1-202ENST00000467182 TRGV3P03979 118 aa10.09□□□□□ -0.79
COL4A1-202ENST00000467182 PSMB8P28062 276 aa10.09□□□□□ -0.79
COL4A1-202ENST00000467182 NPBWR1P48145 328 aa10.09□□□□□ -0.79
COL4A1-202ENST00000467182 RAB14P61106 215 aa10.09□□□□□ -0.79
COL4A1-202ENST00000467182 RPL15P61313 204 aaKnown RBP10.09□□□□□ -0.79
COL4A1-202ENST00000467182 KIAA0141Q14154 515 aaPredicted RBP10.09□□□□□ -0.79
COL4A1-202ENST00000467182 PXDC1Q5TGL8 231 aa10.09□□□□□ -0.79
COL4A1-202ENST00000467182 ZNF329Q86UD4 541 aa10.09□□□□□ -0.79
COL4A1-202ENST00000467182 FAM213BQ8TBF2 198 aa10.09□□□□□ -0.79
COL4A1-202ENST00000467182 KCNIP2Q9NS61 270 aa10.09□□□□□ -0.79
COL4A1-202ENST00000467182 SEC14L6B5MCN3 397 aa10.08□□□□□ -0.8
COL4A1-202ENST00000467182 MBP02144 154 aa10.08□□□□□ -0.8
COL4A1-202ENST00000467182 CTSGP08311 255 aa10.08□□□□□ -0.8
COL4A1-202ENST00000467182 M6PRP20645 277 aa10.08□□□□□ -0.8
COL4A1-202ENST00000467182 ADMP35318 185 aa10.08□□□□□ -0.8
COL4A1-202ENST00000467182 RAB9AP51151 201 aa10.08□□□□□ -0.8
COL4A1-202ENST00000467182 TPPP2P59282 170 aa10.08□□□□□ -0.8
COL4A1-202ENST00000467182 SELENOTP62341 195 aa10.08□□□□□ -0.8
COL4A1-202ENST00000467182 BLOC1S1P78537 153 aa10.08□□□□□ -0.8
COL4A1-202ENST00000467182 ATP5G2Q06055 141 aa10.08□□□□□ -0.8
COL4A1-202ENST00000467182 ACOT6Q3I5F7 207 aaPredicted RBP10.08□□□□□ -0.8
COL4A1-202ENST00000467182 SPSB3Q6PJ21 355 aa10.08□□□□□ -0.8
COL4A1-202ENST00000467182 LCNL1Q6ZST4 164 aa10.08□□□□□ -0.8
COL4A1-202ENST00000467182 OR10G4Q8NGN3 311 aa10.08□□□□□ -0.8
COL4A1-202ENST00000467182 OR10G9Q8NGN4 311 aa10.08□□□□□ -0.8
COL4A1-202ENST00000467182 OR10G7Q8NGN6 311 aa10.08□□□□□ -0.8
COL4A1-202ENST00000467182 MYOZ3Q8TDC0 251 aa10.08□□□□□ -0.8
COL4A1-202ENST00000467182 WIPF2Q8TF74 440 aaPredicted RBP10.08□□□□□ -0.8
COL4A1-202ENST00000467182 MBD3L1Q8WWY6 194 aa10.08□□□□□ -0.8
COL4A1-202ENST00000467182 RCC1LQ96I51 464 aaKnown RBP10.08□□□□□ -0.8
COL4A1-202ENST00000467182 MED9Q9NWA0 146 aa10.08□□□□□ -0.8
COL4A1-202ENST00000467182 FN1P02751 2386 aaKnown RBP10.08□□□□□ -0.8
COL4A1-202ENST00000467182 NSD1Q96L73 2696 aaPredicted RBP10.08□□□□□ -0.8
COL4A1-202ENST00000467182 TRAV30A0A087WSZ9 112 aa10.07□□□□□ -0.8
COL4A1-202ENST00000467182 TRBV7-1A0A0A6YYK4 115 aa10.07□□□□□ -0.8
COL4A1-202ENST00000467182 GNG7O60262 68 aa10.07□□□□□ -0.8
COL4A1-202ENST00000467182 EIF3GO75821 320 aaKnown RBP eCLIP10.07□□□□□ -0.8
COL4A1-202ENST00000467182 PF4V1P10720 104 aa10.07□□□□□ -0.8
COL4A1-202ENST00000467182 PLP1P60201 277 aa10.07□□□□□ -0.8
COL4A1-202ENST00000467182 YPEL3P61236 119 aaPredicted RBP10.07□□□□□ -0.8
COL4A1-202ENST00000467182 Q56UQ5 140 aa10.07□□□□□ -0.8
COL4A1-202ENST00000467182 PATE2Q6UY27 113 aa10.07□□□□□ -0.8
COL4A1-202ENST00000467182 RNF152Q8N8N0 203 aa10.07□□□□□ -0.8
COL4A1-202ENST00000467182 TMEM37Q8WXS4 190 aa10.07□□□□□ -0.8
COL4A1-202ENST00000467182 EEF1AKMT3Q96AZ1 226 aa10.07□□□□□ -0.8
COL4A1-202ENST00000467182 USMG5Q96IX5 58 aa10.07□□□□□ -0.8
COL4A1-202ENST00000467182 ATP6V0BQ99437 205 aa10.07□□□□□ -0.8
COL4A1-202ENST00000467182 CHRDL1Q9BU40 450 aa10.07□□□□□ -0.8
COL4A1-202ENST00000467182 C16orf95Q9H693 158 aa10.07□□□□□ -0.8
COL4A1-202ENST00000467182 OR2T8A6NH00 312 aa10.06□□□□□ -0.8
COL4A1-202ENST00000467182 TOMM40O96008 361 aa10.06□□□□□ -0.8
COL4A1-202ENST00000467182 OR5G3P0C626 314 aa10.06□□□□□ -0.8
COL4A1-202ENST00000467182 PSG1P11464 419 aa10.06□□□□□ -0.8
COL4A1-202ENST00000467182 GPR183P32249 361 aa10.06□□□□□ -0.8
COL4A1-202ENST00000467182 ZNF616Q08AN1 781 aa10.06□□□□□ -0.8
COL4A1-202ENST00000467182 FOXE3Q13461 319 aa10.06□□□□□ -0.8
COL4A1-202ENST00000467182 SPATA31B1PQ5VZV4 182 aa10.06□□□□□ -0.8
COL4A1-202ENST00000467182 FAM122CQ6P4D5 195 aa10.06□□□□□ -0.8
COL4A1-202ENST00000467182 SLC7A5P1Q8MH63 180 aa10.06□□□□□ -0.8
COL4A1-202ENST00000467182 JMJD8Q96S16 334 aa10.06□□□□□ -0.8
COL4A1-202ENST00000467182 MTORP42345 2549 aa10.06□□□□□ -0.8
COL4A1-202ENST00000467182 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.05□□□□□ -0.8
COL4A1-202ENST00000467182 TRAV1-1A0A0B4J248 108 aa10.05□□□□□ -0.8
COL4A1-202ENST00000467182 CTXND1A0A1B0GTU2 59 aa10.05□□□□□ -0.8
COL4A1-202ENST00000467182 WI2-2373I1.2A0A1W2PRP0 233 aa10.05□□□□□ -0.8
COL4A1-202ENST00000467182 TEX46H3BTG2 121 aa10.05□□□□□ -0.8
COL4A1-202ENST00000467182 CLEC3BP05452 202 aa10.05□□□□□ -0.8
COL4A1-202ENST00000467182 ELANEP08246 267 aa10.05□□□□□ -0.8
COL4A1-202ENST00000467182 H2AFB1P0C5Y9 115 aa10.05□□□□□ -0.8
COL4A1-202ENST00000467182 CDC34P49427 236 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms