RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 CA1P00915 261 aaPredicted RBP7.23□□□□□ -1.25
HPS4-209ENST00000466781 CTAG1AP78358 180 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 PRCDQ00LT1 54 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 EPDR1Q9UM22 224 aa7.23□□□□□ -1.25
HPS4-209ENST00000466781 NLRC5Q86WI3 1866 aa7.22□□□□□ -1.25
HPS4-209ENST00000466781 TCF20Q9UGU0 1960 aaKnown RBP7.22□□□□□ -1.25
HPS4-209ENST00000466781 IGHV3-64A0A075B6Q5 118 aa7.22□□□□□ -1.25
HPS4-209ENST00000466781 ZCCHC24Q8N2G6 241 aaKnown RBP7.22□□□□□ -1.25
HPS4-209ENST00000466781 C14orf144Q96I85 54 aa7.22□□□□□ -1.25
HPS4-209ENST00000466781 SPCS1Q9Y6A9 102 aa7.22□□□□□ -1.25
HPS4-209ENST00000466781 SELENOKQ9Y6D0 94 aa7.22□□□□□ -1.25
HPS4-209ENST00000466781 IGHV2-26A0A0B4J1V2 119 aa7.22□□□□□ -1.25
HPS4-209ENST00000466781 LINC00587B1AMM8 73 aa7.22□□□□□ -1.25
HPS4-209ENST00000466781 K7ENP7 123 aa7.22□□□□□ -1.25
HPS4-209ENST00000466781 RPL36AP83881 106 aaKnown RBP7.22□□□□□ -1.25
HPS4-209ENST00000466781 LINC01356Q8N9X3 169 aa7.22□□□□□ -1.25
HPS4-209ENST00000466781 RPL36ALQ969Q0 106 aaKnown RBP7.22□□□□□ -1.25
HPS4-209ENST00000466781 VWA8A3KMH1 1905 aa7.22□□□□□ -1.25
HPS4-209ENST00000466781 ZFC3H1O60293 1989 aaKnown RBP7.22□□□□□ -1.25
HPS4-209ENST00000466781 F2Z2F3 143 aa7.22□□□□□ -1.25
HPS4-209ENST00000466781 FXYD7P58549 80 aa7.22□□□□□ -1.25
HPS4-209ENST00000466781 IL18BPO95998 194 aa7.22□□□□□ -1.25
HPS4-209ENST00000466781 PPIFP30405 207 aaKnown RBP7.22□□□□□ -1.25
HPS4-209ENST00000466781 KLRD1Q13241 179 aa7.22□□□□□ -1.25
HPS4-209ENST00000466781 PLA2G2CQ5R387 149 aa7.22□□□□□ -1.25
HPS4-209ENST00000466781 C17orf82Q86X59 251 aaPredicted RBP7.22□□□□□ -1.25
HPS4-209ENST00000466781 C1QTNF4Q9BXJ3 329 aa7.22□□□□□ -1.25
HPS4-209ENST00000466781 EREGO14944 169 aa7.21□□□□□ -1.25
HPS4-209ENST00000466781 IGHV3-53P01767 116 aa7.21□□□□□ -1.25
HPS4-209ENST00000466781 DEPPQ9NTK1 212 aa7.21□□□□□ -1.25
HPS4-209ENST00000466781 TFF1P04155 84 aa7.21□□□□□ -1.25
HPS4-209ENST00000466781 MINOS1Q5TGZ0 78 aa7.21□□□□□ -1.25
HPS4-209ENST00000466781 MBNL3Q9NUK0 354 aaKnown RBP7.21□□□□□ -1.25
HPS4-209ENST00000466781 MINOS1-NBL1R4GNA1 71 aa7.21□□□□□ -1.25
HPS4-209ENST00000466781 PCM1Q15154 2024 aa7.21□□□□□ -1.25
HPS4-209ENST00000466781 A0A0U1RRA0 63 aa7.21□□□□□ -1.26
HPS4-209ENST00000466781 M0R2P5 195 aa7.21□□□□□ -1.26
HPS4-209ENST00000466781 SLC25A16P16260 332 aa7.21□□□□□ -1.26
HPS4-209ENST00000466781 ACTL10Q5JWF8 245 aa7.21□□□□□ -1.26
HPS4-209ENST00000466781 LCNL1Q6ZST4 164 aa7.21□□□□□ -1.26
HPS4-209ENST00000466781 ZNF525Q8N782 197 aa7.21□□□□□ -1.26
HPS4-209ENST00000466781 TSC2P49815 1807 aa7.21□□□□□ -1.26
HPS4-209ENST00000466781 TRBV6-7A0A0A0MS04 114 aa7.21□□□□□ -1.26
HPS4-209ENST00000466781 ZNF98A6NK75 572 aa7.21□□□□□ -1.26
HPS4-209ENST00000466781 INSP01308 110 aa7.21□□□□□ -1.26
HPS4-209ENST00000466781 IGKCP01834 107 aa7.21□□□□□ -1.26
HPS4-209ENST00000466781 TIMP3P35625 211 aa7.21□□□□□ -1.26
HPS4-209ENST00000466781 RIPPLY3P57055 190 aa7.21□□□□□ -1.26
HPS4-209ENST00000466781 TPTE2P1Q5T6R2 138 aa7.21□□□□□ -1.26
HPS4-209ENST00000466781 SCN2AQ99250 2005 aa7.21□□□□□ -1.26
HPS4-209ENST00000466781 TRBV7-1A0A0A6YYK4 115 aa7.21□□□□□ -1.26
HPS4-209ENST00000466781 HAPLN4Q86UW8 402 aa7.21□□□□□ -1.26
HPS4-209ENST00000466781 ZNF837Q96EG3 531 aaPredicted RBP7.21□□□□□ -1.26
HPS4-209ENST00000466781 C18orf12Q96KH6 178 aa7.21□□□□□ -1.26
HPS4-209ENST00000466781 SSBP4Q9BWG4 385 aaPredicted RBP7.21□□□□□ -1.26
HPS4-209ENST00000466781 RNASE7Q9H1E1 156 aaKnown RBP7.21□□□□□ -1.26
HPS4-209ENST00000466781 J3QKU1 62 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 ATXN8Q156A1 80 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 RTBDNQ9BSG5 229 aaPredicted RBP7.2□□□□□ -1.26
HPS4-209ENST00000466781 LAMTOR3Q9UHA4 124 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 PPBPP02775 128 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 MS4A6AQ9H2W1 248 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 H3BUX3 64 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 PYYP10082 97 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 CSRP3P50461 194 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 NPC2P61916 151 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 RPL32P62910 135 aaKnown RBP7.2□□□□□ -1.26
HPS4-209ENST00000466781 ERCC8Q13216 396 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 TEX38Q6PEX7 206 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 RASL10AQ92737 203 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 WBP1Q96G27 269 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 LINC01549A6NIU2 74 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 FAM90A9PA6NNJ1 464 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 INS-IGF2F8WCM5 200 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 MLNRO43193 412 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 PAX4O43316 350 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 C15orf32Q32M92 178 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 FAM19A2Q8N3H0 131 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 IGKV2-40A0A087WW87 121 aaPredicted RBP7.2□□□□□ -1.26
HPS4-209ENST00000466781 A0A1B0GV72 72 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 A0A1B0GV90 55 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 IGKV2D-40P01614 121 aaPredicted RBP7.2□□□□□ -1.26
HPS4-209ENST00000466781 SPSB3Q6PJ21 355 aa7.2□□□□□ -1.26
HPS4-209ENST00000466781 RAMP3O60896 148 aa7.19□□□□□ -1.26
HPS4-209ENST00000466781 FBLIM1Q8WUP2 373 aa7.19□□□□□ -1.26
HPS4-209ENST00000466781 E9PQ18 207 aa7.19□□□□□ -1.26
HPS4-209ENST00000466781 CCL20P78556 96 aa7.19□□□□□ -1.26
HPS4-209ENST00000466781 LAGE3Q14657 143 aa7.19□□□□□ -1.26
HPS4-209ENST00000466781 PIP4P2Q8N4L2 257 aa7.19□□□□□ -1.26
HPS4-209ENST00000466781 FAM223BA6NKX1 122 aa7.19□□□□□ -1.26
HPS4-209ENST00000466781 SRP19P09132 144 aaKnown RBP7.19□□□□□ -1.26
HPS4-209ENST00000466781 Q0VFX4 171 aa7.19□□□□□ -1.26
HPS4-209ENST00000466781 SS18Q15532 418 aa7.19□□□□□ -1.26
HPS4-209ENST00000466781 BRD3OSQ6XYD6 125 aa7.19□□□□□ -1.26
HPS4-209ENST00000466781 FAM223AQ8IWN6 122 aa7.19□□□□□ -1.26
HPS4-209ENST00000466781 C5orf30Q96GV9 206 aa7.19□□□□□ -1.26
HPS4-209ENST00000466781 OOSP1A8MZH6 123 aa7.19□□□□□ -1.26
HPS4-209ENST00000466781 DMRT1Q9Y5R6 373 aa7.19□□□□□ -1.26
HPS4-209ENST00000466781 M0R1W7 72 aa7.19□□□□□ -1.26
HPS4-209ENST00000466781 RPL15P61313 204 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms