RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 RPP25LQ8N5L8 163 aaKnown RBP1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 OR13C4Q8NGS5 318 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 GRPEL2Q8TAA5 225 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 THEM6Q8WUY1 208 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 MAFIPQ8WZ33 124 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 H1FXQ92522 213 aaKnown RBP1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 BORCS5Q969J3 196 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 EFCAB11Q9BUY7 163 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 PBOV1Q9GZY1 135 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 TMEM133Q9H2Q1 129 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 RFX7Q2KHR2 1363 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 MYH11P35749 1972 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 DOCK4Q8N1I0 1966 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 ECM29Q5VYK3 1845 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 TECPR2O15040 1411 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 FMN1Q68DA7 1419 aa1.66□□□□□ -2.14
CDC42BPA-211ENST00000466538 SCAF11Q99590 1463 aaKnown RBP1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 HMSDA8MTL9 139 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 H3BT86 120 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 H7BYZ3 331 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 NDUFA2O43678 99 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 PGLYRP1O75594 196 aaPredicted RBP1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 C1QCP02747 245 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 GPX1P07203 203 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 SMIM17P0DL12 118 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 RPL7P18124 248 aaKnown RBP1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 S100GP29377 79 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 PIGPP57054 158 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 SMCO1Q147U7 214 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 LCA10Q71F78 164 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 LRRC28Q86X40 367 aaPredicted RBP1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 NUP35Q8NFH5 326 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 OR52R1Q8NGF1 315 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 CCDC115Q96NT0 180 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 GPER1Q99527 375 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 DERL1Q9BUN8 251 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 OR8D2Q9GZM6 311 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 COMMD5Q9GZQ3 224 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 RASL12Q9NYN1 266 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 SSR3Q9UNL2 185 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 HSPB11Q9Y547 144 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 ANKRD31Q8N7Z5 1873 aa1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 NUP210Q8TEM1 1887 aaPredicted RBP1.65□□□□□ -2.15
CDC42BPA-211ENST00000466538 NCKAP5O14513 1909 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 TONSLQ96HA7 1378 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 MDC1Q14676 2089 aaKnown RBP1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 IGKV1-9A0A0C4DH69 117 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 IRGMA1A4Y4 181 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 F8W036 122 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 TRAPPC2LH3BP13 241 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 NDUFC2O95298 119 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 IGHV3-7P01780 117 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 NFYAP23511 347 aaPredicted RBP1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 POLR2HP52434 150 aaKnown RBP1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 CDC42P60953 191 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 SLC38A11Q08AI6 406 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 AADACL3Q5VUY0 350 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 SAMD13Q5VXD3 122 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 TMEM86AQ8N2M4 240 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 FAM24BQ8N5W8 94 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 ADAT3Q96EY9 351 aaPredicted RBP1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 C2orf50Q96LR7 162 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 AIF1LQ9BQI0 150 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 TVP23BQ9NYZ1 205 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 IL36BQ9NZH7 164 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 GSKIPQ9P0R6 139 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 NAT8Q9UHE5 227 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 ASB4Q9Y574 426 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 GBF1Q92538 1859 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 UHRF1BP1Q6BDS2 1440 aa1.64□□□□□ -2.15
CDC42BPA-211ENST00000466538 EML6Q6ZMW3 1958 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 OBSL1O75147 1896 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 SMARCA4P51532 1647 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 TRAV9-1A0A075B6T8 112 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 J3QRK9 145 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 M0QZK8 103 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 PRM2P04554 102 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 OR10J4P0C629 311 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 HIST1H2BOP23527 126 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 HLA-DMBP28068 263 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 HIST1H2BBP33778 126 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 INSL3P51460 131 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 HIST1H2BDP58876 126 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 HIST1H2BCP62807 126 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 RPS28P62857 69 aaKnown RBP1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 RPL18Q07020 188 aaKnown RBP1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 SPCS2Q15005 226 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 RHEBQ15382 184 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 KISS1Q15726 138 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 NDUFA5Q16718 116 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 HIST2H2BEQ16778 126 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 KRTAP21-3Q3LHN1 58 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 LRRC18Q8N456 261 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 OR8J3Q8NGG0 315 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 TERB2Q8NHR7 220 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 SKA2Q8WVK7 121 aaPredicted RBP1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 ACOT12Q8WYK0 555 aa1.63□□□□□ -2.15
CDC42BPA-211ENST00000466538 HIST1H2BHQ93079 126 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms