RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 Q71RC1 249 aaPredicted RBP11.31□□□□□ -0.6
TGFBR3-204ENST00000465892 DDB2Q92466 427 aa11.31□□□□□ -0.6
TGFBR3-204ENST00000465892 TMUB1Q9BVT8 246 aa11.31□□□□□ -0.6
TGFBR3-204ENST00000465892 ZNF430Q9H8G1 570 aaPredicted RBP11.31□□□□□ -0.6
TGFBR3-204ENST00000465892 FOXA2Q9Y261 457 aaPredicted RBP11.31□□□□□ -0.6
TGFBR3-204ENST00000465892 MAP1BP46821 2468 aaKnown RBP11.31□□□□□ -0.6
TGFBR3-204ENST00000465892 COX7A2P2O60397 106 aa11.31□□□□□ -0.6
TGFBR3-204ENST00000465892 HTR1DP28221 377 aa11.31□□□□□ -0.6
TGFBR3-204ENST00000465892 SPRNQ5BIV9 151 aa11.31□□□□□ -0.6
TGFBR3-204ENST00000465892 DUX4L9Q6RFH8 374 aaPredicted RBP11.31□□□□□ -0.6
TGFBR3-204ENST00000465892 RASL11AQ6T310 242 aa11.31□□□□□ -0.6
TGFBR3-204ENST00000465892 OR2Z1Q8NG97 314 aa11.31□□□□□ -0.6
TGFBR3-204ENST00000465892 CXXC4Q9H2H0 198 aa11.31□□□□□ -0.6
TGFBR3-204ENST00000465892 ROS1P08922 2347 aa11.31□□□□□ -0.6
TGFBR3-204ENST00000465892 TNRC18O15417 2968 aaPredicted RBP11.3□□□□□ -0.6
TGFBR3-204ENST00000465892 NCR2O95944 276 aa11.3□□□□□ -0.6
TGFBR3-204ENST00000465892 SLC25A5P05141 298 aaKnown RBP11.3□□□□□ -0.6
TGFBR3-204ENST00000465892 IGHV1-2P23083 117 aa11.3□□□□□ -0.6
TGFBR3-204ENST00000465892 HIST1H1AQ02539 215 aaPredicted RBP11.3□□□□□ -0.6
TGFBR3-204ENST00000465892 AP1S3Q96PC3 154 aa11.3□□□□□ -0.6
TGFBR3-204ENST00000465892 ABI3Q9P2A4 366 aa11.3□□□□□ -0.6
TGFBR3-204ENST00000465892 JPT1Q9UK76 154 aa11.3□□□□□ -0.6
TGFBR3-204ENST00000465892 A0A1B0GXF2 115 aa11.3□□□□□ -0.6
TGFBR3-204ENST00000465892 FXYD7P58549 80 aa11.3□□□□□ -0.6
TGFBR3-204ENST00000465892 C1orf185Q5T7R7 199 aa11.3□□□□□ -0.6
TGFBR3-204ENST00000465892 C2orf91Q6ZV80 131 aa11.3□□□□□ -0.6
TGFBR3-204ENST00000465892 BHLHA15Q7RTS1 189 aaPredicted RBP11.3□□□□□ -0.6
TGFBR3-204ENST00000465892 SMIM12Q96EX1 92 aa11.3□□□□□ -0.6
TGFBR3-204ENST00000465892 JMJD8Q96S16 334 aa11.3□□□□□ -0.6
TGFBR3-204ENST00000465892 TACC2O95359 2948 aa11.3□□□□□ -0.6
TGFBR3-204ENST00000465892 TEX50A0A1B0GTY4 177 aa11.29□□□□□ -0.6
TGFBR3-204ENST00000465892 PGPA6NDG6 321 aa11.29□□□□□ -0.6
TGFBR3-204ENST00000465892 E7EUB6 86 aa11.29□□□□□ -0.6
TGFBR3-204ENST00000465892 CHEK1O14757 476 aa11.29□□□□□ -0.6
TGFBR3-204ENST00000465892 MOSP00540 346 aa11.29□□□□□ -0.6
TGFBR3-204ENST00000465892 TMEM177Q53S58 311 aa11.29□□□□□ -0.6
TGFBR3-204ENST00000465892 BPIFA4PQ86YQ2 179 aa11.29□□□□□ -0.6
TGFBR3-204ENST00000465892 ORM2P19652 201 aa11.29□□□□□ -0.6
TGFBR3-204ENST00000465892 RAB30Q15771 203 aa11.29□□□□□ -0.6
TGFBR3-204ENST00000465892 PATE2Q6UY27 113 aa11.29□□□□□ -0.6
TGFBR3-204ENST00000465892 FAM231DQ6ZW35 169 aa11.29□□□□□ -0.6
TGFBR3-204ENST00000465892 PRR7Q8TB68 274 aa11.29□□□□□ -0.6
TGFBR3-204ENST00000465892 CALYQ9NYX4 217 aa11.29□□□□□ -0.6
TGFBR3-204ENST00000465892 CXCL12P48061 93 aa11.29□□□□□ -0.6
TGFBR3-204ENST00000465892 C10orf113Q5VZT2 155 aa11.29□□□□□ -0.6
TGFBR3-204ENST00000465892 S100A7AQ86SG5 101 aa11.29□□□□□ -0.6
TGFBR3-204ENST00000465892 OR1N2Q8NGR9 330 aa11.29□□□□□ -0.6
TGFBR3-204ENST00000465892 TRAV8-1A0A0A6YYK1 113 aa11.28□□□□□ -0.6
TGFBR3-204ENST00000465892 HLA-DRB1P01911 266 aa11.28□□□□□ -0.6
TGFBR3-204ENST00000465892 TMEM97Q5BJF2 176 aa11.28□□□□□ -0.6
TGFBR3-204ENST00000465892 TMEM105Q8N8V8 129 aa11.28□□□□□ -0.6
TGFBR3-204ENST00000465892 CNEP1R1Q8N9A8 125 aa11.28□□□□□ -0.6
TGFBR3-204ENST00000465892 DEFB108BQ8NET1 73 aa11.28□□□□□ -0.6
TGFBR3-204ENST00000465892 NPIPB3Q92617 1050 aa11.28□□□□□ -0.6
TGFBR3-204ENST00000465892 RPS20P60866 119 aaKnown RBP11.28□□□□□ -0.6
TGFBR3-204ENST00000465892 TM4SF20Q53R12 229 aa11.28□□□□□ -0.6
TGFBR3-204ENST00000465892 P01737 135 aa11.27□□□□□ -0.6
TGFBR3-204ENST00000465892 APELAP0DMC3 54 aa11.27□□□□□ -0.6
TGFBR3-204ENST00000465892 PRCDQ00LT1 54 aa11.27□□□□□ -0.6
TGFBR3-204ENST00000465892 CD69Q07108 199 aa11.27□□□□□ -0.6
TGFBR3-204ENST00000465892 LINC00305Q7Z4B0 112 aa11.27□□□□□ -0.6
TGFBR3-204ENST00000465892 H1FXQ92522 213 aaKnown RBP11.27□□□□□ -0.6
TGFBR3-204ENST00000465892 RPP21Q9H633 154 aaKnown RBP11.27□□□□□ -0.6
TGFBR3-204ENST00000465892 C7orf69Q9H7B7 122 aa11.27□□□□□ -0.6
TGFBR3-204ENST00000465892 MRPS17Q9Y2R5 130 aaKnown RBP11.27□□□□□ -0.6
TGFBR3-204ENST00000465892 INTS1Q8N201 2190 aaKnown RBP11.27□□□□□ -0.61
TGFBR3-204ENST00000465892 IGHV3-21A0A0B4J1V1 117 aa11.27□□□□□ -0.61
TGFBR3-204ENST00000465892 LIPFP07098 398 aa11.27□□□□□ -0.61
TGFBR3-204ENST00000465892 FAM106CPP0CH98 169 aa11.27□□□□□ -0.61
TGFBR3-204ENST00000465892 RNASE2P10153 161 aaKnown RBP11.27□□□□□ -0.61
TGFBR3-204ENST00000465892 MEOX1P50221 254 aa11.27□□□□□ -0.61
TGFBR3-204ENST00000465892 FAM106AQ4KMX7 169 aa11.27□□□□□ -0.61
TGFBR3-204ENST00000465892 C10orf55Q5SWW7 151 aa11.27□□□□□ -0.61
TGFBR3-204ENST00000465892 PRSS57Q6UWY2 283 aa11.27□□□□□ -0.61
TGFBR3-204ENST00000465892 C5orf17Q8NAS9 161 aa11.27□□□□□ -0.61
TGFBR3-204ENST00000465892 OR8A1Q8NGG7 326 aa11.27□□□□□ -0.61
TGFBR3-204ENST00000465892 CHCHD1Q96BP2 118 aaKnown RBP11.27□□□□□ -0.61
TGFBR3-204ENST00000465892 TPPP3Q9BW30 176 aa11.27□□□□□ -0.61
TGFBR3-204ENST00000465892 PSMB11A5LHX3 300 aa11.26□□□□□ -0.61
TGFBR3-204ENST00000465892 K7ESF4 209 aa11.26□□□□□ -0.61
TGFBR3-204ENST00000465892 GNG7O60262 68 aa11.26□□□□□ -0.61
TGFBR3-204ENST00000465892 OR5AL1P0C617 328 aa11.26□□□□□ -0.61
TGFBR3-204ENST00000465892 GUSBP1Q15486 140 aa11.26□□□□□ -0.61
TGFBR3-204ENST00000465892 RTL8BQ17RB0 113 aa11.26□□□□□ -0.61
TGFBR3-204ENST00000465892 FXYD5Q96DB9 178 aa11.26□□□□□ -0.61
TGFBR3-204ENST00000465892 MRPL36Q9P0J6 103 aaKnown RBP11.26□□□□□ -0.61
TGFBR3-204ENST00000465892 DSCAMO60469 2012 aa11.26□□□□□ -0.61
TGFBR3-204ENST00000465892 REG1BP48304 166 aa11.26□□□□□ -0.61
TGFBR3-204ENST00000465892 RABAC1Q9UI14 185 aa11.26□□□□□ -0.61
TGFBR3-204ENST00000465892 EPDR1Q9UM22 224 aa11.26□□□□□ -0.61
TGFBR3-204ENST00000465892 ZNF257Q9Y2Q1 563 aa11.26□□□□□ -0.61
TGFBR3-204ENST00000465892 FBLL1A6NHQ2 334 aaKnown RBP11.25□□□□□ -0.61
TGFBR3-204ENST00000465892 COX8AP10176 69 aa11.25□□□□□ -0.61
TGFBR3-204ENST00000465892 ACP1P24666 158 aa11.25□□□□□ -0.61
TGFBR3-204ENST00000465892 PAX2Q02962 417 aa11.25□□□□□ -0.61
TGFBR3-204ENST00000465892 RUSC1-AS1Q66K80 236 aa11.25□□□□□ -0.61
TGFBR3-204ENST00000465892 ATP5L2Q7Z4Y8 100 aa11.25□□□□□ -0.61
TGFBR3-204ENST00000465892 RBMXL3Q8N7X1 1067 aaKnown RBP11.25□□□□□ -0.61
TGFBR3-204ENST00000465892 FLYWCH2Q96CP2 140 aaKnown RBP11.25□□□□□ -0.61
TGFBR3-204ENST00000465892 DAZAP1Q96EP5 407 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms