RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 YIF1AO95070 293 aa13.42□□□□□ -0.26
COL7A1-205ENST00000465238 IGLV1-51P01701 117 aa13.42□□□□□ -0.26
COL7A1-205ENST00000465238 RND2P52198 227 aa13.42□□□□□ -0.26
COL7A1-205ENST00000465238 VAMP2P63027 116 aa13.42□□□□□ -0.26
COL7A1-205ENST00000465238 UNQ9165/PRO28630Q6UXU0 137 aa13.42□□□□□ -0.26
COL7A1-205ENST00000465238 CACNG8Q8WXS5 425 aa13.42□□□□□ -0.26
COL7A1-205ENST00000465238 TMEM190Q8WZ59 177 aa13.42□□□□□ -0.26
COL7A1-205ENST00000465238 ACY3Q96HD9 319 aa13.42□□□□□ -0.26
COL7A1-205ENST00000465238 SLC35E1Q96K37 410 aa13.42□□□□□ -0.26
COL7A1-205ENST00000465238 C20orf24Q9BUV8 137 aa13.42□□□□□ -0.26
COL7A1-205ENST00000465238 SIGLEC8Q9NYZ4 499 aa13.42□□□□□ -0.26
COL7A1-205ENST00000465238 RCL1Q9Y2P8 373 aaKnown RBP13.42□□□□□ -0.26
COL7A1-205ENST00000465238 C7orf66A4D0T2 115 aa13.41□□□□□ -0.26
COL7A1-205ENST00000465238 A8MWP6 167 aa13.41□□□□□ -0.26
COL7A1-205ENST00000465238 SIX6O95475 246 aa13.41□□□□□ -0.26
COL7A1-205ENST00000465238 FOLR2P14207 255 aa13.41□□□□□ -0.26
COL7A1-205ENST00000465238 ELLP55199 621 aaPredicted RBP13.41□□□□□ -0.26
COL7A1-205ENST00000465238 TAS2R30P59541 319 aa13.41□□□□□ -0.26
COL7A1-205ENST00000465238 S100A10P60903 97 aa13.41□□□□□ -0.26
COL7A1-205ENST00000465238 ZNF600Q6ZNG1 722 aa13.41□□□□□ -0.26
COL7A1-205ENST00000465238 TMEM116Q8NCL8 245 aa13.41□□□□□ -0.26
COL7A1-205ENST00000465238 NPIPB3Q92617 1050 aa13.41□□□□□ -0.26
COL7A1-205ENST00000465238 ALG5Q9Y673 324 aa13.41□□□□□ -0.26
COL7A1-205ENST00000465238 K7EPK0 472 aa13.4□□□□□ -0.26
COL7A1-205ENST00000465238 TSC22D2O75157 780 aa13.4□□□□□ -0.26
COL7A1-205ENST00000465238 PVALBP20472 110 aaPredicted RBP13.4□□□□□ -0.26
COL7A1-205ENST00000465238 CBLN1P23435 193 aa13.4□□□□□ -0.26
COL7A1-205ENST00000465238 PAX9P55771 341 aa13.4□□□□□ -0.26
COL7A1-205ENST00000465238 CYCSP99999 105 aaKnown RBP13.4□□□□□ -0.26
COL7A1-205ENST00000465238 TM4SF20Q53R12 229 aa13.4□□□□□ -0.26
COL7A1-205ENST00000465238 CASC10Q5T4H9 136 aa13.4□□□□□ -0.26
COL7A1-205ENST00000465238 HAPLN4Q86UW8 402 aa13.4□□□□□ -0.26
COL7A1-205ENST00000465238 DYNLRB2Q8TF09 96 aa13.4□□□□□ -0.26
COL7A1-205ENST00000465238 TMEM213A2RRL7 107 aa13.39□□□□□ -0.27
COL7A1-205ENST00000465238 OR10J1P30954 320 aa13.39□□□□□ -0.27
COL7A1-205ENST00000465238 IL15RAQ13261 267 aa13.39□□□□□ -0.27
COL7A1-205ENST00000465238 RAB32Q13637 225 aa13.39□□□□□ -0.27
COL7A1-205ENST00000465238 TIGITQ495A1 244 aa13.39□□□□□ -0.27
COL7A1-205ENST00000465238 Q8N1Y9 231 aa13.39□□□□□ -0.27
COL7A1-205ENST00000465238 OR1S2Q8NGQ3 325 aa13.39□□□□□ -0.27
COL7A1-205ENST00000465238 MARC2Q969Z3 335 aa13.39□□□□□ -0.27
COL7A1-205ENST00000465238 DAZ1Q9NQZ3 744 aaKnown RBP13.39□□□□□ -0.27
COL7A1-205ENST00000465238 MRPL27Q9P0M9 148 aaKnown RBP13.39□□□□□ -0.27
COL7A1-205ENST00000465238 MGAT4CQ9UBM8 478 aa13.39□□□□□ -0.27
COL7A1-205ENST00000465238 IGHV3OR16-8A0A075B7F1 116 aa13.38□□□□□ -0.27
COL7A1-205ENST00000465238 A8MZ25 164 aa13.38□□□□□ -0.27
COL7A1-205ENST00000465238 K7EMT4 169 aa13.38□□□□□ -0.27
COL7A1-205ENST00000465238 IGLC1P0CG04 106 aa13.38□□□□□ -0.27
COL7A1-205ENST00000465238 IGHV4-30-4P0DP06 118 aa13.38□□□□□ -0.27
COL7A1-205ENST00000465238 BCAP31P51572 246 aa13.38□□□□□ -0.27
COL7A1-205ENST00000465238 GAMTQ14353 236 aa13.38□□□□□ -0.27
COL7A1-205ENST00000465238 OR8G2PQ6IF36 304 aa13.38□□□□□ -0.27
COL7A1-205ENST00000465238 TOMM20LQ6UXN7 152 aa13.38□□□□□ -0.27
COL7A1-205ENST00000465238 TMEM14EPQ6UXP3 125 aa13.38□□□□□ -0.27
COL7A1-205ENST00000465238 ADAMTSL5Q6ZMM2 481 aa13.38□□□□□ -0.27
COL7A1-205ENST00000465238 TM2D3Q9BRN9 247 aa13.38□□□□□ -0.27
COL7A1-205ENST00000465238 NMES1Q9C002 83 aa13.38□□□□□ -0.27
COL7A1-205ENST00000465238 TECRQ9NZ01 308 aaKnown RBP13.38□□□□□ -0.27
COL7A1-205ENST00000465238 PUS1Q9Y606 427 aaKnown RBP eCLIP13.38□□□□□ -0.27
COL7A1-205ENST00000465238 DYNC2H1Q8NCM8 4307 aaKnown RBP13.38□□□□□ -0.27
COL7A1-205ENST00000465238 ZNF207O43670 478 aaKnown RBP13.37□□□□□ -0.27
COL7A1-205ENST00000465238 IGKV1-17P01599 117 aa13.37□□□□□ -0.27
COL7A1-205ENST00000465238 RLN2P04090 185 aa13.37□□□□□ -0.27
COL7A1-205ENST00000465238 METTL15P1P0C7V9 234 aa13.37□□□□□ -0.27
COL7A1-205ENST00000465238 EDN2P20800 178 aa13.37□□□□□ -0.27
COL7A1-205ENST00000465238 YPEL3P61236 119 aaPredicted RBP13.37□□□□□ -0.27
COL7A1-205ENST00000465238 Q8WTZ3 238 aa13.37□□□□□ -0.27
COL7A1-205ENST00000465238 CITED4Q96RK1 184 aa13.37□□□□□ -0.27
COL7A1-205ENST00000465238 GINS3Q9BRX5 216 aa13.37□□□□□ -0.27
COL7A1-205ENST00000465238 C19orf73Q9NVV2 129 aa13.37□□□□□ -0.27
COL7A1-205ENST00000465238 ZFP92A6NM28 416 aa13.36□□□□□ -0.27
COL7A1-205ENST00000465238 PRSS46E5RG02 174 aa13.36□□□□□ -0.27
COL7A1-205ENST00000465238 C8orf88P0DMB2 117 aa13.36□□□□□ -0.27
COL7A1-205ENST00000465238 LYL1P12980 280 aa13.36□□□□□ -0.27
COL7A1-205ENST00000465238 CAV2P51636 162 aa13.36□□□□□ -0.27
COL7A1-205ENST00000465238 H2BFSP57053 126 aa13.36□□□□□ -0.27
COL7A1-205ENST00000465238 OXA1LQ15070 435 aa13.36□□□□□ -0.27
COL7A1-205ENST00000465238 DEFB114Q30KQ6 69 aa13.36□□□□□ -0.27
COL7A1-205ENST00000465238 LCN12Q6JVE5 192 aa13.36□□□□□ -0.27
COL7A1-205ENST00000465238 OR10P1Q8NGE3 313 aa13.36□□□□□ -0.27
COL7A1-205ENST00000465238 OR2K2Q8NGT1 345 aa13.36□□□□□ -0.27
COL7A1-205ENST00000465238 ZNF414Q96IQ9 312 aa13.36□□□□□ -0.27
COL7A1-205ENST00000465238 MED28Q9H204 178 aa13.36□□□□□ -0.27
COL7A1-205ENST00000465238 TENM2Q9NT68 2774 aa13.36□□□□□ -0.27
COL7A1-205ENST00000465238 TRAV14DV4A0A0A6YYC5 116 aa13.35□□□□□ -0.27
COL7A1-205ENST00000465238 FABP1P07148 127 aa13.35□□□□□ -0.27
COL7A1-205ENST00000465238 ACOT7LQ6ZUV0 252 aa13.35□□□□□ -0.27
COL7A1-205ENST00000465238 SMCO3A2RU48 225 aa13.34□□□□□ -0.27
COL7A1-205ENST00000465238 FAM24AA6NFZ4 105 aa13.34□□□□□ -0.27
COL7A1-205ENST00000465238 PMS2P5A8MQ11 134 aa13.34□□□□□ -0.27
COL7A1-205ENST00000465238 CCNKO75909 580 aa13.34□□□□□ -0.27
COL7A1-205ENST00000465238 RD3LP0DJH9 198 aa13.34□□□□□ -0.27
COL7A1-205ENST00000465238 DLK1P80370 383 aa13.34□□□□□ -0.27
COL7A1-205ENST00000465238 AKR1C1Q04828 323 aa13.34□□□□□ -0.27
COL7A1-205ENST00000465238 CD300EQ496F6 205 aaPredicted RBP13.34□□□□□ -0.27
COL7A1-205ENST00000465238 LRRC37A5PQ49AS3 106 aa13.34□□□□□ -0.27
COL7A1-205ENST00000465238 BTNL8Q6UX41 500 aa13.34□□□□□ -0.27
COL7A1-205ENST00000465238 C11orf1Q9H5F2 150 aa13.34□□□□□ -0.27
COL7A1-205ENST00000465238 ZFAND3Q9H8U3 227 aa13.34□□□□□ -0.27
COL7A1-205ENST00000465238 MLXQ9UH92 298 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms