RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 LSM3P62310 102 aaKnown RBP7.8□□□□□ -1.16
COL11A1-207ENST00000465209 DHRS2Q13268 280 aa7.8□□□□□ -1.16
COL11A1-207ENST00000465209 GDF5OSQ5U4N7 250 aa7.8□□□□□ -1.16
COL11A1-207ENST00000465209 PRSS54Q6PEW0 395 aa7.8□□□□□ -1.16
COL11A1-207ENST00000465209 SNX29P2Q8IUI4 249 aa7.8□□□□□ -1.16
COL11A1-207ENST00000465209 OR1S2Q8NGQ3 325 aa7.8□□□□□ -1.16
COL11A1-207ENST00000465209 LHFPL5Q8TAF8 219 aa7.8□□□□□ -1.16
COL11A1-207ENST00000465209 TMEM230Q96A57 120 aa7.8□□□□□ -1.16
COL11A1-207ENST00000465209 Q9H521 79 aa7.8□□□□□ -1.16
COL11A1-207ENST00000465209 XCL2Q9UBD3 114 aa7.8□□□□□ -1.16
COL11A1-207ENST00000465209 COMMD3Q9UBI1 195 aa7.8□□□□□ -1.16
COL11A1-207ENST00000465209 TRAV30A0A087WSZ9 112 aa7.79□□□□□ -1.16
COL11A1-207ENST00000465209 BUB3O43684 328 aa7.79□□□□□ -1.16
COL11A1-207ENST00000465209 HLA-DRB4P13762 266 aa7.79□□□□□ -1.16
COL11A1-207ENST00000465209 RND2P52198 227 aa7.79□□□□□ -1.16
COL11A1-207ENST00000465209 YPEL3P61236 119 aaPredicted RBP7.79□□□□□ -1.16
COL11A1-207ENST00000465209 DHODHQ02127 395 aa7.79□□□□□ -1.16
COL11A1-207ENST00000465209 SP6Q3SY56 376 aa7.79□□□□□ -1.16
COL11A1-207ENST00000465209 C2orf83Q53S99 150 aa7.79□□□□□ -1.16
COL11A1-207ENST00000465209 ZNF575Q86XF7 245 aa7.79□□□□□ -1.16
COL11A1-207ENST00000465209 ARRDC1Q8N5I2 433 aa7.79□□□□□ -1.16
COL11A1-207ENST00000465209 ZNF709Q8N972 641 aa7.79□□□□□ -1.16
COL11A1-207ENST00000465209 OR4D10Q8NGI6 311 aa7.79□□□□□ -1.16
COL11A1-207ENST00000465209 OR52E5Q8NH55 327 aa7.79□□□□□ -1.16
COL11A1-207ENST00000465209 C1QTNF4Q9BXJ3 329 aa7.79□□□□□ -1.16
COL11A1-207ENST00000465209 NRN1Q9NPD7 142 aa7.79□□□□□ -1.16
COL11A1-207ENST00000465209 KLK11Q9UBX7 282 aa7.79□□□□□ -1.16
COL11A1-207ENST00000465209 HLA-DRB4X5D2U9 266 aa7.79□□□□□ -1.16
COL11A1-207ENST00000465209 HPGDSO60760 199 aa7.78□□□□□ -1.16
COL11A1-207ENST00000465209 CD3DP04234 171 aa7.78□□□□□ -1.16
COL11A1-207ENST00000465209 IL4P05112 153 aa7.78□□□□□ -1.16
COL11A1-207ENST00000465209 PGAM2P15259 253 aa7.78□□□□□ -1.16
COL11A1-207ENST00000465209 OR10J1P30954 320 aa7.78□□□□□ -1.16
COL11A1-207ENST00000465209 AP2S1P53680 142 aaPredicted RBP7.78□□□□□ -1.16
COL11A1-207ENST00000465209 DEFB1P60022 68 aa7.78□□□□□ -1.16
COL11A1-207ENST00000465209 SPCS3P61009 180 aa7.78□□□□□ -1.16
COL11A1-207ENST00000465209 NCS1P62166 190 aa7.78□□□□□ -1.16
COL11A1-207ENST00000465209 NARS2Q96I59 477 aaKnown RBP7.78□□□□□ -1.16
COL11A1-207ENST00000465209 PDCD10Q9BUL8 212 aa7.78□□□□□ -1.16
COL11A1-207ENST00000465209 IGLV2-18A0A075B6J9 118 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 RPS10-NUDT3A0A1W2PQS6 291 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 SOCS3O14543 225 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 SCGB2A1O75556 95 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 ATG12O94817 140 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 CDS2O95674 445 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 TOMM40O96008 361 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 SLC25A4P12235 298 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 HTR2BP41595 481 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 NKX2-1P43699 371 aaPredicted RBP7.77□□□□□ -1.17
COL11A1-207ENST00000465209 EIF2B2P49770 351 aaKnown RBP7.77□□□□□ -1.17
COL11A1-207ENST00000465209 NUTF2P61970 127 aaKnown RBP7.77□□□□□ -1.17
COL11A1-207ENST00000465209 SNRPD3P62318 126 aaKnown RBP7.77□□□□□ -1.17
COL11A1-207ENST00000465209 TRIM16LQ309B1 348 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 RNASE10Q5GAN6 216 aaKnown RBP7.77□□□□□ -1.17
COL11A1-207ENST00000465209 SIGLEC15Q6ZMC9 328 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 FAM219AQ8IW50 185 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 CENPSQ8N2Z9 138 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 OR13C8Q8NGS7 320 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 OR52I2Q8NH67 350 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 RNASEH2CQ8TDP1 164 aaKnown RBP7.77□□□□□ -1.17
COL11A1-207ENST00000465209 Q8WTZ3 238 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 GLYATL2Q8WU03 294 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 FAM210BQ96KR6 192 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 DKK2Q9UBU2 259 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 MTFP1Q9UDX5 166 aa7.77□□□□□ -1.17
COL11A1-207ENST00000465209 SMIM31A0A1B0GVY4 71 aa7.76□□□□□ -1.17
COL11A1-207ENST00000465209 B3GALNT1O75752 331 aa7.76□□□□□ -1.17
COL11A1-207ENST00000465209 OR5AC1P0C628 307 aa7.76□□□□□ -1.17
COL11A1-207ENST00000465209 SPART-AS1P0CW21 52 aa7.76□□□□□ -1.17
COL11A1-207ENST00000465209 TBPP20226 339 aa7.76□□□□□ -1.17
COL11A1-207ENST00000465209 RNASE12Q5GAN4 147 aaKnown RBP7.76□□□□□ -1.17
COL11A1-207ENST00000465209 SLC24A4Q8NFF2 622 aa7.76□□□□□ -1.17
COL11A1-207ENST00000465209 RRNAD1Q96FB5 475 aaKnown RBP7.76□□□□□ -1.17
COL11A1-207ENST00000465209 CLUHP3Q96NS8 147 aa7.76□□□□□ -1.17
COL11A1-207ENST00000465209 WDR12Q9GZL7 423 aaKnown RBP7.76□□□□□ -1.17
COL11A1-207ENST00000465209 TMEM222Q9H0R3 208 aa7.76□□□□□ -1.17
COL11A1-207ENST00000465209 SAV1Q9H4B6 383 aaPredicted RBP7.76□□□□□ -1.17
COL11A1-207ENST00000465209 ENY2Q9NPA8 101 aa7.76□□□□□ -1.17
COL11A1-207ENST00000465209 COPZ2Q9P299 210 aa7.76□□□□□ -1.17
COL11A1-207ENST00000465209 TMEM189A5PLL7 270 aa7.75□□□□□ -1.17
COL11A1-207ENST00000465209 SMIM9A6NGZ8 99 aa7.75□□□□□ -1.17
COL11A1-207ENST00000465209 PSG1P11464 419 aa7.75□□□□□ -1.17
COL11A1-207ENST00000465209 NPY1RP25929 384 aa7.75□□□□□ -1.17
COL11A1-207ENST00000465209 VBP1P61758 197 aa7.75□□□□□ -1.17
COL11A1-207ENST00000465209 ZNF79Q15937 498 aa7.75□□□□□ -1.17
COL11A1-207ENST00000465209 NMSQ5H8A3 153 aa7.75□□□□□ -1.17
COL11A1-207ENST00000465209 FAM222AQ5U5X8 452 aa7.75□□□□□ -1.17
COL11A1-207ENST00000465209 SELENOHQ8IZQ5 122 aaKnown RBP7.75□□□□□ -1.17
COL11A1-207ENST00000465209 CCDC71LQ8N9Z2 235 aa7.75□□□□□ -1.17
COL11A1-207ENST00000465209 TERB2Q8NHR7 220 aa7.75□□□□□ -1.17
COL11A1-207ENST00000465209 MARCH1Q8TCQ1 289 aa7.75□□□□□ -1.17
COL11A1-207ENST00000465209 NPIPB3Q92617 1050 aa7.75□□□□□ -1.17
COL11A1-207ENST00000465209 RBPMSQ93062 196 aaKnown RBP7.75□□□□□ -1.17
COL11A1-207ENST00000465209 GPR146Q96CH1 333 aa7.75□□□□□ -1.17
COL11A1-207ENST00000465209 ABHD1Q96SE0 405 aa7.75□□□□□ -1.17
COL11A1-207ENST00000465209 RTBDNQ9BSG5 229 aaPredicted RBP7.75□□□□□ -1.17
COL11A1-207ENST00000465209 FUNDC2Q9BWH2 189 aa7.75□□□□□ -1.17
COL11A1-207ENST00000465209 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.75□□□□□ -1.17
COL11A1-207ENST00000465209 CACNG5Q9UF02 275 aa7.75□□□□□ -1.17
COL11A1-207ENST00000465209 HERC1Q15751 4861 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms